RNA–Protein interactions for RNA: ENST00000512069.6

PDE4D-220, Transcript of phosphodiesterase 4D, humanhuman

TSL 2

Gene PDE4D, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-220ENST00000512069 AEBP2Q6ZN18 517 aaPredicted RBP27.01■■□□□ 1.91
PDE4D-220ENST00000512069 CHIC1Q5VXU3 224 aa26.06■■□□□ 1.76
PDE4D-220ENST00000512069 PHF23Q9BUL5 403 aaPredicted RBP22.96■■□□□ 1.27
PDE4D-220ENST00000512069 SENP3Q9H4L4 574 aaPredicted RBP22.88■■□□□ 1.25
PDE4D-220ENST00000512069 FOXD1Q16676 465 aa21.34■■□□□ 1.01
PDE4D-220ENST00000512069 PLPPR3Q6T4P5 718 aa21.04■□□□□ 0.96
PDE4D-220ENST00000512069 PPP6R1Q9UPN7 881 aa20.37■□□□□ 0.85
PDE4D-220ENST00000512069 ADRA2BP18089 450 aa20.34■□□□□ 0.85
PDE4D-220ENST00000512069 PIAS4Q8N2W9 510 aaPredicted RBP20.03■□□□□ 0.8
PDE4D-220ENST00000512069 MSH5O43196 834 aa19.69■□□□□ 0.74
PDE4D-220ENST00000512069 MAPK8IP2Q13387 824 aaPredicted RBP18.56■□□□□ 0.56
PDE4D-220ENST00000512069 PPP4R3CPQ6ZMV5 832 aa18.55■□□□□ 0.56
PDE4D-220ENST00000512069 SCAF1Q9H7N4 1312 aaKnown RBP18.5■□□□□ 0.55
PDE4D-220ENST00000512069 POTEDQ86YR6 584 aa18.45■□□□□ 0.54
PDE4D-220ENST00000512069 DMRT2Q9Y5R5 561 aa18.23■□□□□ 0.51
PDE4D-220ENST00000512069 CNKSR2Q8WXI2 1034 aa18.04■□□□□ 0.48
PDE4D-220ENST00000512069 NCBP3Q53F19 620 aaKnown RBP17.93■□□□□ 0.46
PDE4D-220ENST00000512069 KCNA4P22459 653 aa17.86■□□□□ 0.45
PDE4D-220ENST00000512069 HOXD11P31277 338 aaPredicted RBP17.75■□□□□ 0.43
PDE4D-220ENST00000512069 RNF216Q9NWF9 866 aaPredicted RBP17.75■□□□□ 0.43
PDE4D-220ENST00000512069 NPM3O75607 178 aaKnown RBP17.73■□□□□ 0.43
PDE4D-220ENST00000512069 DCAF8L1A6NGE4 600 aa17.54■□□□□ 0.4
PDE4D-220ENST00000512069 DNAJC5BQ9UF47 199 aa17.13■□□□□ 0.33
PDE4D-220ENST00000512069 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.95■□□□□ 0.3
PDE4D-220ENST00000512069 SLC4A1APQ9BWU0 796 aaKnown RBP16.93■□□□□ 0.3
PDE4D-220ENST00000512069 RNF39Q9H2S5 420 aa16.89■□□□□ 0.29
PDE4D-220ENST00000512069 SLC4A2P04920 1241 aa16.82■□□□□ 0.28
PDE4D-220ENST00000512069 CACNB1Q02641 598 aaPredicted RBP16.66■□□□□ 0.26
PDE4D-220ENST00000512069 U3KPZ7 1027 aaPredicted RBP16.65■□□□□ 0.26
PDE4D-220ENST00000512069 C1QBPQ07021 282 aaKnown RBP16.64■□□□□ 0.25
PDE4D-220ENST00000512069 FOXD4L1Q9NU39 408 aa16.44■□□□□ 0.22
PDE4D-220ENST00000512069 ZBTB22O15209 634 aa16.43■□□□□ 0.22
PDE4D-220ENST00000512069 MYCNP04198 464 aaPredicted RBP16.33■□□□□ 0.2
PDE4D-220ENST00000512069 SPINK5Q9NQ38 1064 aaPredicted RBP16.3■□□□□ 0.2
PDE4D-220ENST00000512069 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.27■□□□□ 0.2
PDE4D-220ENST00000512069 HNRNPUL2Q1KMD3 747 aaKnown RBP16.27■□□□□ 0.2
PDE4D-220ENST00000512069 CAPN15O75808 1086 aa16.23■□□□□ 0.19
PDE4D-220ENST00000512069 SAMD1Q6SPF0 538 aaPredicted RBP16.22■□□□□ 0.19
PDE4D-220ENST00000512069 EHMT2Q96KQ7 1210 aa16.21■□□□□ 0.19
PDE4D-220ENST00000512069 CSRNP3Q8WYN3 585 aa16.15■□□□□ 0.18
PDE4D-220ENST00000512069 APLP2Q06481 763 aa16.14■□□□□ 0.17
PDE4D-220ENST00000512069 TRHP20396 242 aaPredicted RBP16.11■□□□□ 0.17
PDE4D-220ENST00000512069 ATF5Q9Y2D1 282 aaPredicted RBP16.02■□□□□ 0.16
PDE4D-220ENST00000512069 DSG3P32926 999 aa16■□□□□ 0.15
PDE4D-220ENST00000512069 ZNF219Q9P2Y4 722 aaPredicted RBP16■□□□□ 0.15
PDE4D-220ENST00000512069 ABCB7O75027 752 aa15.93■□□□□ 0.14
PDE4D-220ENST00000512069 ATXN8OSP0DMR3 200 aa15.85■□□□□ 0.13
PDE4D-220ENST00000512069 POLA2Q14181 598 aa15.79■□□□□ 0.12
PDE4D-220ENST00000512069 ZBTB12Q9Y330 459 aaPredicted RBP15.39■□□□□ 0.05
PDE4D-220ENST00000512069 MKRN4PQ13434 485 aaPredicted RBP15.28■□□□□ 0.04
PDE4D-220ENST00000512069 FBLN2P98095 1184 aa15.27■□□□□ 0.04
PDE4D-220ENST00000512069 OSCARQ8IYS5 282 aa15.24■□□□□ 0.03
PDE4D-220ENST00000512069 RBM42Q9BTD8 480 aaKnown RBP15.18■□□□□ 0.02
PDE4D-220ENST00000512069 SPDYE2BA6NHP3 402 aa14.98□□□□□ -0.01
PDE4D-220ENST00000512069 SPDYE6P0CI01 402 aa14.98□□□□□ -0.01
PDE4D-220ENST00000512069 SPDYE2Q495Y8 402 aa14.98□□□□□ -0.01
PDE4D-220ENST00000512069 AKT1S1Q96B36 256 aa14.97□□□□□ -0.01
PDE4D-220ENST00000512069 ZNF692Q9BU19 519 aaPredicted RBP14.95□□□□□ -0.02
PDE4D-220ENST00000512069 REM2Q8IYK8 340 aaPredicted RBP14.87□□□□□ -0.03
PDE4D-220ENST00000512069 SSUH2Q9Y2M2 353 aa14.85□□□□□ -0.03
PDE4D-220ENST00000512069 SPDYE4A6NLX3 237 aa14.79□□□□□ -0.04
PDE4D-220ENST00000512069 PABPN1Q86U42 306 aaKnown RBP eCLIP14.75□□□□□ -0.05
PDE4D-220ENST00000512069 PITPNM1O00562 1244 aa14.71□□□□□ -0.05
PDE4D-220ENST00000512069 CHRDL2Q6WN34 429 aa14.71□□□□□ -0.05
PDE4D-220ENST00000512069 CLEC11AQ9Y240 323 aa14.64□□□□□ -0.07
PDE4D-220ENST00000512069 SPDYE1Q8NFV5 336 aaPredicted RBP14.62□□□□□ -0.07
PDE4D-220ENST00000512069 FKBP8Q14318 412 aa14.59□□□□□ -0.07
PDE4D-220ENST00000512069 POTEHQ6S545 545 aa14.55□□□□□ -0.08
PDE4D-220ENST00000512069 PIP4P2Q8N4L2 257 aa14.49□□□□□ -0.09
PDE4D-220ENST00000512069 FXR2P51116 673 aaKnown RBP eCLIP14.46□□□□□ -0.09
PDE4D-220ENST00000512069 PROM2Q8N271 834 aa14.46□□□□□ -0.09
PDE4D-220ENST00000512069 PRR29P0C7W0 189 aa14.44□□□□□ -0.1
PDE4D-220ENST00000512069 STAG3Q9UJ98 1225 aa14.37□□□□□ -0.11
PDE4D-220ENST00000512069 PRKAR2AP13861 404 aaKnown RBP14.34□□□□□ -0.11
PDE4D-220ENST00000512069 CHADLQ6NUI6 762 aa14.32□□□□□ -0.12
PDE4D-220ENST00000512069 CREBZFQ9NS37 354 aa14.2□□□□□ -0.14
PDE4D-220ENST00000512069 FBXO3Q9UK99 471 aa14.12□□□□□ -0.15
PDE4D-220ENST00000512069 FARP1Q9Y4F1 1045 aaPredicted RBP14.12□□□□□ -0.15
PDE4D-220ENST00000512069 HAX1O00165 279 aa14.11□□□□□ -0.15
PDE4D-220ENST00000512069 MIER1Q8N108 512 aa14.08□□□□□ -0.16
PDE4D-220ENST00000512069 MNX1P50219 401 aaPredicted RBP14.02□□□□□ -0.17
PDE4D-220ENST00000512069 EVX2Q03828 476 aa14.02□□□□□ -0.17
PDE4D-220ENST00000512069 PLCD3Q8N3E9 789 aa14.01□□□□□ -0.17
PDE4D-220ENST00000512069 C19orf67A6NJJ6 358 aa13.97□□□□□ -0.17
PDE4D-220ENST00000512069 PLEKHG5O94827 1062 aa13.94□□□□□ -0.18
PDE4D-220ENST00000512069 NPM1P06748 294 aaKnown RBP eCLIP13.91□□□□□ -0.18
PDE4D-220ENST00000512069 VASPP50552 380 aaPredicted RBP13.91□□□□□ -0.18
PDE4D-220ENST00000512069 CD44P16070 742 aaKnown RBP13.9□□□□□ -0.18
PDE4D-220ENST00000512069 SP7Q8TDD2 431 aaPredicted RBP13.85□□□□□ -0.19
PDE4D-220ENST00000512069 ZRANB1Q9UGI0 708 aa13.8□□□□□ -0.2
PDE4D-220ENST00000512069 ZBTB47Q9UFB7 747 aaPredicted RBP13.79□□□□□ -0.2
PDE4D-220ENST00000512069 KLHL34Q8N239 644 aa13.78□□□□□ -0.2
PDE4D-220ENST00000512069 IFNLR1Q8IU57 520 aaPredicted RBP13.75□□□□□ -0.21
PDE4D-220ENST00000512069 TSPYL2Q9H2G4 693 aaPredicted RBP13.75□□□□□ -0.21
PDE4D-220ENST00000512069 PAK3O75914 559 aaPredicted RBP13.74□□□□□ -0.21
PDE4D-220ENST00000512069 RASEFQ8IZ41 740 aa13.74□□□□□ -0.21
PDE4D-220ENST00000512069 NUBP1P53384 320 aa13.72□□□□□ -0.21
PDE4D-220ENST00000512069 GABBR2O75899 941 aa13.68□□□□□ -0.22
PDE4D-220ENST00000512069 ZNF579Q8NAF0 562 aaKnown RBP13.67□□□□□ -0.22
PDE4D-220ENST00000512069 PHF12Q96QT6 1004 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms