RNA–Protein interactions for RNA: ENST00000548492.1

ATXN2-217, Transcript of ataxin 2, humanhuman

TSL 4

Gene ATXN2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-217ENST00000548492 AEBP2Q6ZN18 517 aaPredicted RBP21.21■□□□□ 0.99
ATXN2-217ENST00000548492 CHIC1Q5VXU3 224 aa20.12■□□□□ 0.81
ATXN2-217ENST00000548492 SENP3Q9H4L4 574 aaPredicted RBP18.11■□□□□ 0.49
ATXN2-217ENST00000548492 PHF23Q9BUL5 403 aaPredicted RBP17.85■□□□□ 0.45
ATXN2-217ENST00000548492 FOXD1Q16676 465 aa16.86■□□□□ 0.29
ATXN2-217ENST00000548492 PLPPR3Q6T4P5 718 aa16.06■□□□□ 0.16
ATXN2-217ENST00000548492 MSH5O43196 834 aa15.82■□□□□ 0.12
ATXN2-217ENST00000548492 PIAS4Q8N2W9 510 aaPredicted RBP15.74■□□□□ 0.11
ATXN2-217ENST00000548492 PPP6R1Q9UPN7 881 aa15.74■□□□□ 0.11
ATXN2-217ENST00000548492 ADRA2BP18089 450 aa15.67■□□□□ 0.1
ATXN2-217ENST00000548492 POTEDQ86YR6 584 aa15.48■□□□□ 0.07
ATXN2-217ENST00000548492 NISCHQ9Y2I1 1504 aa14.64□□□□□ -0.07
ATXN2-217ENST00000548492 ABCC9O60706 1549 aa14.56□□□□□ -0.08
ATXN2-217ENST00000548492 DNAJC5BQ9UF47 199 aa14.52□□□□□ -0.09
ATXN2-217ENST00000548492 MAPK8IP2Q13387 824 aaPredicted RBP14.4□□□□□ -0.1
ATXN2-217ENST00000548492 DMRT2Q9Y5R5 561 aa14.36□□□□□ -0.11
ATXN2-217ENST00000548492 SCAF1Q9H7N4 1312 aaKnown RBP14.36□□□□□ -0.11
ATXN2-217ENST00000548492 DNAJC5Q9H3Z4 198 aa14.18□□□□□ -0.14
ATXN2-217ENST00000548492 PPP4R3CPQ6ZMV5 832 aa14.06□□□□□ -0.16
ATXN2-217ENST00000548492 HOXD11P31277 338 aaPredicted RBP13.82□□□□□ -0.2
ATXN2-217ENST00000548492 CNKSR2Q8WXI2 1034 aa13.82□□□□□ -0.2
ATXN2-217ENST00000548492 DCAF8L1A6NGE4 600 aa13.71□□□□□ -0.21
ATXN2-217ENST00000548492 RNF216Q9NWF9 866 aaPredicted RBP13.7□□□□□ -0.22
ATXN2-217ENST00000548492 CCDC180Q9P1Z9 1646 aa13.69□□□□□ -0.22
ATXN2-217ENST00000548492 CACNB1Q02641 598 aaPredicted RBP13.57□□□□□ -0.24
ATXN2-217ENST00000548492 NCBP3Q53F19 620 aaKnown RBP13.52□□□□□ -0.25
ATXN2-217ENST00000548492 RNF39Q9H2S5 420 aa13.5□□□□□ -0.25
ATXN2-217ENST00000548492 RB1CC1Q8TDY2 1594 aa13.49□□□□□ -0.25
ATXN2-217ENST00000548492 KCNA4P22459 653 aa13.32□□□□□ -0.28
ATXN2-217ENST00000548492 PABPN1Q86U42 306 aaKnown RBP eCLIP13.32□□□□□ -0.28
ATXN2-217ENST00000548492 NPM3O75607 178 aaKnown RBP13.31□□□□□ -0.28
ATXN2-217ENST00000548492 C1QBPQ07021 282 aaKnown RBP13.3□□□□□ -0.28
ATXN2-217ENST00000548492 CECR2Q9BXF3 1484 aa13.26□□□□□ -0.29
ATXN2-217ENST00000548492 UNC13AQ9UPW8 1703 aa13.19□□□□□ -0.3
ATXN2-217ENST00000548492 NACADO15069 1562 aa13.15□□□□□ -0.3
ATXN2-217ENST00000548492 CC2D2AQ9P2K1 1620 aa13.15□□□□□ -0.3
ATXN2-217ENST00000548492 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.14□□□□□ -0.31
ATXN2-217ENST00000548492 BICRAQ9NZM4 1560 aa13.11□□□□□ -0.31
ATXN2-217ENST00000548492 CUX2O14529 1486 aa13.09□□□□□ -0.31
ATXN2-217ENST00000548492 TRIM41Q8WV44 630 aa13.05□□□□□ -0.32
ATXN2-217ENST00000548492 SHROOM4Q9ULL8 1493 aa12.94□□□□□ -0.34
ATXN2-217ENST00000548492 EIF4G1Q04637 1599 aaKnown RBP12.88□□□□□ -0.35
ATXN2-217ENST00000548492 U3KPZ7 1027 aaPredicted RBP12.87□□□□□ -0.35
ATXN2-217ENST00000548492 SLC4A2P04920 1241 aa12.73□□□□□ -0.37
ATXN2-217ENST00000548492 SLC4A1APQ9BWU0 796 aaKnown RBP12.73□□□□□ -0.37
ATXN2-217ENST00000548492 ERCC6Q03468 1493 aa12.69□□□□□ -0.38
ATXN2-217ENST00000548492 SPINK5Q9NQ38 1064 aaPredicted RBP12.68□□□□□ -0.38
ATXN2-217ENST00000548492 EHMT2Q96KQ7 1210 aa12.67□□□□□ -0.38
ATXN2-217ENST00000548492 MYO15BQ96JP2 1530 aa12.67□□□□□ -0.38
ATXN2-217ENST00000548492 DCAF8L2P0C7V8 631 aa12.66□□□□□ -0.38
ATXN2-217ENST00000548492 CAPN15O75808 1086 aa12.65□□□□□ -0.38
ATXN2-217ENST00000548492 DSG3P32926 999 aa12.61□□□□□ -0.39
ATXN2-217ENST00000548492 APLP2Q06481 763 aa12.53□□□□□ -0.4
ATXN2-217ENST00000548492 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.51□□□□□ -0.41
ATXN2-217ENST00000548492 HNRNPUL2Q1KMD3 747 aaKnown RBP12.51□□□□□ -0.41
ATXN2-217ENST00000548492 ZNF219Q9P2Y4 722 aaPredicted RBP12.45□□□□□ -0.42
ATXN2-217ENST00000548492 TRHP20396 242 aaPredicted RBP12.43□□□□□ -0.42
ATXN2-217ENST00000548492 SAMD1Q6SPF0 538 aaPredicted RBP12.43□□□□□ -0.42
ATXN2-217ENST00000548492 THOC2Q8NI27 1593 aaKnown RBP12.38□□□□□ -0.43
ATXN2-217ENST00000548492 CSRNP3Q8WYN3 585 aa12.37□□□□□ -0.43
ATXN2-217ENST00000548492 ABCB7O75027 752 aa12.35□□□□□ -0.43
ATXN2-217ENST00000548492 SCRIBQ14160 1630 aa12.34□□□□□ -0.43
ATXN2-217ENST00000548492 MYCNP04198 464 aaPredicted RBP12.33□□□□□ -0.44
ATXN2-217ENST00000548492 ILDR1Q86SU0 546 aaPredicted RBP12.28□□□□□ -0.44
ATXN2-217ENST00000548492 BAZ1AQ9NRL2 1556 aaPredicted RBP12.26□□□□□ -0.45
ATXN2-217ENST00000548492 ZBTB22O15209 634 aa12.25□□□□□ -0.45
ATXN2-217ENST00000548492 OSCARQ8IYS5 282 aa12.23□□□□□ -0.45
ATXN2-217ENST00000548492 RIMBP3CA6NJZ7 1639 aa12.22□□□□□ -0.45
ATXN2-217ENST00000548492 RIMBP3BA6NNM3 1639 aa12.22□□□□□ -0.45
ATXN2-217ENST00000548492 RIMBP3Q9UFD9 1639 aa12.22□□□□□ -0.45
ATXN2-217ENST00000548492 NESP48681 1621 aa12.2□□□□□ -0.46
ATXN2-217ENST00000548492 FOXD4L1Q9NU39 408 aa12.17□□□□□ -0.46
ATXN2-217ENST00000548492 SMARCA2P51531 1590 aa12.14□□□□□ -0.47
ATXN2-217ENST00000548492 POTEHQ6S545 545 aa12.13□□□□□ -0.47
ATXN2-217ENST00000548492 NCAPD3P42695 1498 aa12.13□□□□□ -0.47
ATXN2-217ENST00000548492 POLA2Q14181 598 aa12.1□□□□□ -0.47
ATXN2-217ENST00000548492 DCAF1Q9Y4B6 1507 aa12.1□□□□□ -0.47
ATXN2-217ENST00000548492 ARHGEF11O15085 1522 aa12.07□□□□□ -0.48
ATXN2-217ENST00000548492 KIF21AQ7Z4S6 1674 aa12.07□□□□□ -0.48
ATXN2-217ENST00000548492 LAMC3Q9Y6N6 1575 aa12.05□□□□□ -0.48
ATXN2-217ENST00000548492 RBM42Q9BTD8 480 aaKnown RBP12.05□□□□□ -0.48
ATXN2-217ENST00000548492 ATF5Q9Y2D1 282 aaPredicted RBP12.02□□□□□ -0.49
ATXN2-217ENST00000548492 HMGXB3Q12766 1538 aa11.98□□□□□ -0.49
ATXN2-217ENST00000548492 PDS5BQ9NTI5 1447 aa11.98□□□□□ -0.49
ATXN2-217ENST00000548492 WDR62O43379 1518 aa11.97□□□□□ -0.49
ATXN2-217ENST00000548492 CYB5RLQ6IPT4 315 aa11.95□□□□□ -0.5
ATXN2-217ENST00000548492 MRC2Q9UBG0 1479 aa11.95□□□□□ -0.5
ATXN2-217ENST00000548492 ZCCHC6Q5VYS8 1495 aaKnown RBP11.93□□□□□ -0.5
ATXN2-217ENST00000548492 ATAD2BQ9ULI0 1458 aa11.91□□□□□ -0.5
ATXN2-217ENST00000548492 ZBTB12Q9Y330 459 aaPredicted RBP11.9□□□□□ -0.5
ATXN2-217ENST00000548492 ARAP1Q96P48 1450 aa11.87□□□□□ -0.51
ATXN2-217ENST00000548492 ATXN8OSP0DMR3 200 aa11.83□□□□□ -0.52
ATXN2-217ENST00000548492 CHRDL2Q6WN34 429 aa11.78□□□□□ -0.52
ATXN2-217ENST00000548492 AKT1S1Q96B36 256 aa11.77□□□□□ -0.53
ATXN2-217ENST00000548492 BAZ1BQ9UIG0 1483 aaKnown RBP11.76□□□□□ -0.53
ATXN2-217ENST00000548492 RSF1Q96T23 1441 aaPredicted RBP11.71□□□□□ -0.53
ATXN2-217ENST00000548492 CEP164Q9UPV0 1460 aa11.68□□□□□ -0.54
ATXN2-217ENST00000548492 CADPSQ9ULU8 1353 aa11.67□□□□□ -0.54
ATXN2-217ENST00000548492 SMARCA4P51532 1647 aa11.67□□□□□ -0.54
ATXN2-217ENST00000548492 LMTK3Q96Q04 1460 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms