Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 AC026185.1-201ENST00000445748 174 ntBASIC13.91□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC13.91□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC13.91□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC13.91□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC13.91□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC13.91□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC13.91□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC13.91□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC13.9□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC13.9□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC13.9□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC13.9□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC13.9□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC13.9□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC13.9□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV8-3A0A0A6YYJ7 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC13.9□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC13.89□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 STAC-204ENST00000457375 1366 ntTSL 2 BASIC13.89□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC13.89□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 SAPCD2P1-201ENST00000395413 1184 ntBASIC13.89□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 AC091799.1-201ENST00000422823 811 ntBASIC13.89□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 CASP6-205ENST00000505486 538 ntTSL 4 BASIC13.89□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC13.89□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC13.89□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 AC073111.5-205ENST00000641717 521 ntBASIC13.89□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC13.89□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC13.89□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC13.89□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC13.89□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC13.89□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms