RNA–Protein interactions for RNA: ENST00000505486.1

CASP6-205, Transcript of caspase 6, humanhuman

TSL 4 BASIC

Gene CASP6, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP6-205ENST00000505486 NISCHQ9Y2I1 1504 aa49.7■■■■■ 5.55
CASP6-205ENST00000505486 ABCC9O60706 1549 aa45.14■■■■■ 4.82
CASP6-205ENST00000505486 CCDC180Q9P1Z9 1646 aa44.65■■■■■ 4.74
CASP6-205ENST00000505486 RB1CC1Q8TDY2 1594 aa42.71■■■■■ 4.43
CASP6-205ENST00000505486 DNAJC5BQ9UF47 199 aa42.7■■■■■ 4.43
CASP6-205ENST00000505486 NACADO15069 1562 aa42.33■■■■■ 4.37
CASP6-205ENST00000505486 DCAF8L2P0C7V8 631 aa42.16■■■■■ 4.34
CASP6-205ENST00000505486 PABPN1Q86U42 306 aaKnown RBP eCLIP42.01■■■■■ 4.32
CASP6-205ENST00000505486 UNC13AQ9UPW8 1703 aa41.71■■■■■ 4.27
CASP6-205ENST00000505486 MYO15BQ96JP2 1530 aa41.62■■■■■ 4.25
CASP6-205ENST00000505486 BICRAQ9NZM4 1560 aa41.54■■■■■ 4.24
CASP6-205ENST00000505486 ZCCHC6Q5VYS8 1495 aaKnown RBP41.22■■■■■ 4.19
CASP6-205ENST00000505486 DCAF1Q9Y4B6 1507 aa40.98■■■■■ 4.15
CASP6-205ENST00000505486 SHROOM4Q9ULL8 1493 aa40.85■■■■■ 4.13
CASP6-205ENST00000505486 SCRIBQ14160 1630 aa40.78■■■■■ 4.12
CASP6-205ENST00000505486 CC2D2AQ9P2K1 1620 aa40.7■■■■■ 4.11
CASP6-205ENST00000505486 CECR2Q9BXF3 1484 aa40.66■■■■■ 4.1
CASP6-205ENST00000505486 EIF4G1Q04637 1599 aaKnown RBP40.53■■■■■ 4.08
CASP6-205ENST00000505486 DNAJC5Q9H3Z4 198 aa39.38■■■■□ 3.89
CASP6-205ENST00000505486 NCAPD3P42695 1498 aa39.13■■■■□ 3.85
CASP6-205ENST00000505486 ATAD2BQ9ULI0 1458 aa38.99■■■■□ 3.83
CASP6-205ENST00000505486 CUX2O14529 1486 aa38.97■■■■□ 3.83
CASP6-205ENST00000505486 ERCC6Q03468 1493 aa38.96■■■■□ 3.83
CASP6-205ENST00000505486 SMARCA4P51532 1647 aa38.83■■■■□ 3.81
CASP6-205ENST00000505486 SMARCA2P51531 1590 aa38.8■■■■□ 3.8
CASP6-205ENST00000505486 HMGXB3Q12766 1538 aa38.78■■■■□ 3.8
CASP6-205ENST00000505486 NESP48681 1621 aa38.69■■■■□ 3.78
CASP6-205ENST00000505486 BAZ1BQ9UIG0 1483 aaKnown RBP38.58■■■■□ 3.77
CASP6-205ENST00000505486 BAZ1AQ9NRL2 1556 aaPredicted RBP38.57■■■■□ 3.76
CASP6-205ENST00000505486 PEG3Q9GZU2 1588 aa38.43■■■■□ 3.74
CASP6-205ENST00000505486 MROH2BQ7Z745 1585 aa38.33■■■■□ 3.73
CASP6-205ENST00000505486 THOC2Q8NI27 1593 aaKnown RBP38.31■■■■□ 3.72
CASP6-205ENST00000505486 LAMC3Q9Y6N6 1575 aa38.26■■■■□ 3.72
CASP6-205ENST00000505486 KIF21AQ7Z4S6 1674 aa38.09■■■■□ 3.69
CASP6-205ENST00000505486 PDS5BQ9NTI5 1447 aa38.08■■■■□ 3.69
CASP6-205ENST00000505486 CADPSQ9ULU8 1353 aa37.93■■■■□ 3.66
CASP6-205ENST00000505486 WIZO95785 1651 aa37.82■■■■□ 3.64
CASP6-205ENST00000505486 MRC2Q9UBG0 1479 aa37.79■■■■□ 3.64
CASP6-205ENST00000505486 RSF1Q96T23 1441 aaPredicted RBP37.76■■■■□ 3.63
CASP6-205ENST00000505486 WDR62O43379 1518 aa37.71■■■■□ 3.63
CASP6-205ENST00000505486 CEP164Q9UPV0 1460 aa37.57■■■■□ 3.6
CASP6-205ENST00000505486 TRIM41Q8WV44 630 aa37.56■■■■□ 3.6
CASP6-205ENST00000505486 FANCD2Q9BXW9 1451 aa37.52■■■■□ 3.6
CASP6-205ENST00000505486 CFTRP13569 1480 aa37.43■■■■□ 3.58
CASP6-205ENST00000505486 TOP2AP11388 1531 aaKnown RBP37.32■■■■□ 3.57
CASP6-205ENST00000505486 URB2Q14146 1524 aaKnown RBP37.25■■■■□ 3.55
CASP6-205ENST00000505486 OSCARQ8IYS5 282 aa37.15■■■■□ 3.54
CASP6-205ENST00000505486 SUPT5HO00267 1087 aaKnown RBP37.07■■■■□ 3.52
CASP6-205ENST00000505486 CCDC88BA6NC98 1476 aa36.93■■■■□ 3.5
CASP6-205ENST00000505486 PRDM2Q13029 1718 aa36.88■■■■□ 3.49
CASP6-205ENST00000505486 ZNF608Q9ULD9 1512 aaPredicted RBP36.87■■■■□ 3.49
CASP6-205ENST00000505486 IFT140Q96RY7 1462 aa36.83■■■■□ 3.49
CASP6-205ENST00000505486 TOPBP1Q92547 1522 aa36.76■■■■□ 3.48
CASP6-205ENST00000505486 RIMBP3CA6NJZ7 1639 aa36.71■■■■□ 3.47
CASP6-205ENST00000505486 RIMBP3BA6NNM3 1639 aa36.71■■■■□ 3.47
CASP6-205ENST00000505486 RIMBP3Q9UFD9 1639 aa36.71■■■■□ 3.47
CASP6-205ENST00000505486 EIF4G3O43432 1585 aaKnown RBP36.59■■■■□ 3.45
CASP6-205ENST00000505486 ABCC8Q09428 1581 aa36.58■■■■□ 3.45
CASP6-205ENST00000505486 ARHGEF11O15085 1522 aa36.58■■■■□ 3.45
CASP6-205ENST00000505486 DNMBPQ6XZF7 1577 aa36.57■■■■□ 3.44
CASP6-205ENST00000505486 AQRO60306 1485 aaKnown RBP eCLIP36.48■■■■□ 3.43
CASP6-205ENST00000505486 TARBP1Q13395 1621 aaKnown RBP36.45■■■■□ 3.42
CASP6-205ENST00000505486 POLA1P09884 1462 aaPredicted RBP36.38■■■■□ 3.41
CASP6-205ENST00000505486 CYB5RLQ6IPT4 315 aa36.36■■■■□ 3.41
CASP6-205ENST00000505486 CHD1O14646 1710 aa36.34■■■■□ 3.41
CASP6-205ENST00000505486 FBLN2P98095 1184 aa36.3■■■■□ 3.4
CASP6-205ENST00000505486 RAD54L2Q9Y4B4 1467 aa36.29■■■■□ 3.4
CASP6-205ENST00000505486 ARAP1Q96P48 1450 aa36.22■■■■□ 3.39
CASP6-205ENST00000505486 TDRD9Q8NDG6 1382 aaKnown RBP36.21■■■■□ 3.39
CASP6-205ENST00000505486 SOGA1O94964 1423 aa36.2■■■■□ 3.39
CASP6-205ENST00000505486 FGD5Q6ZNL6 1462 aa36.1■■■■□ 3.37
CASP6-205ENST00000505486 SNAPC4Q5SXM2 1469 aa36.09■■■■□ 3.37
CASP6-205ENST00000505486 TRHP20396 242 aaPredicted RBP36.05■■■■□ 3.36
CASP6-205ENST00000505486 CUX1P39880 1505 aa36.03■■■■□ 3.36
CASP6-205ENST00000505486 WDR97A6NE52 1622 aa35.97■■■■□ 3.35
CASP6-205ENST00000505486 CLASP1Q7Z460 1538 aa35.97■■■■□ 3.35
CASP6-205ENST00000505486 CHMP7Q8WUX9 453 aaPredicted RBP35.95■■■■□ 3.35
CASP6-205ENST00000505486 MAGI1Q96QZ7 1491 aaPredicted RBP35.92■■■■□ 3.34
CASP6-205ENST00000505486 GRIN2BQ13224 1484 aa35.91■■■■□ 3.34
CASP6-205ENST00000505486 SYNJ1O43426 1573 aa35.87■■■■□ 3.33
CASP6-205ENST00000505486 SYNJ2O15056 1496 aa35.83■■■■□ 3.33
CASP6-205ENST00000505486 GAPVD1Q14C86 1478 aa35.74■■■■□ 3.31
CASP6-205ENST00000505486 PBRM1Q86U86 1689 aa35.69■■■■□ 3.3
CASP6-205ENST00000505486 ABCA10Q8WWZ4 1543 aa35.65■■■■□ 3.3
CASP6-205ENST00000505486 WRNQ14191 1432 aaPredicted RBP eCLIP35.62■■■■□ 3.29
CASP6-205ENST00000505486 ABCA5Q8WWZ7 1642 aa35.61■■■■□ 3.29
CASP6-205ENST00000505486 TOP2BQ02880 1626 aa35.49■■■■□ 3.27
CASP6-205ENST00000505486 BIVM-ERCC5R4GMW8 1640 aa35.47■■■■□ 3.27
CASP6-205ENST00000505486 GRIN2AQ12879 1464 aa35.46■■■■□ 3.27
CASP6-205ENST00000505486 ERCC6L2Q5T890 1561 aa35.44■■■■□ 3.26
CASP6-205ENST00000505486 ADAMTS12P58397 1594 aa35.38■■■■□ 3.25
CASP6-205ENST00000505486 NUP160Q12769 1436 aa35.36■■■■□ 3.25
CASP6-205ENST00000505486 CEP170Q5SW79 1584 aa35.36■■■■□ 3.25
CASP6-205ENST00000505486 FHAD1B1AJZ9 1412 aa35.27■■■■□ 3.24
CASP6-205ENST00000505486 AEBP2Q6ZN18 517 aaPredicted RBP35.22■■■■□ 3.23
CASP6-205ENST00000505486 SHROOM2Q13796 1616 aa35.19■■■■□ 3.22
CASP6-205ENST00000505486 ERICH3Q5RHP9 1530 aa35.17■■■■□ 3.22
CASP6-205ENST00000505486 PRG4Q92954 1404 aaPredicted RBP35.06■■■■□ 3.2
CASP6-205ENST00000505486 JPH4Q96JJ6 628 aa35■■■■□ 3.19
CASP6-205ENST00000505486 RUSC2Q8N2Y8 1516 aa34.89■■■■□ 3.18
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms