RNA–Protein interactions for RNA: ENST00000639738.1

SCARB2-219, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 1,517 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-219ENST00000639738 NISCHQ9Y2I1 1504 aa48.9■■■■■ 5.42
SCARB2-219ENST00000639738 CCDC180Q9P1Z9 1646 aa42.99■■■■■ 4.47
SCARB2-219ENST00000639738 ABCC9O60706 1549 aa41.42■■■■■ 4.22
SCARB2-219ENST00000639738 ZCCHC6Q5VYS8 1495 aaKnown RBP40.96■■■■■ 4.15
SCARB2-219ENST00000639738 DCAF1Q9Y4B6 1507 aa40.51■■■■■ 4.08
SCARB2-219ENST00000639738 MYO15BQ96JP2 1530 aa40.28■■■■■ 4.04
SCARB2-219ENST00000639738 DCAF8L2P0C7V8 631 aa40.28■■■■■ 4.04
SCARB2-219ENST00000639738 NACADO15069 1562 aa40.15■■■■■ 4.02
SCARB2-219ENST00000639738 RB1CC1Q8TDY2 1594 aa39.92■■■■□ 3.98
SCARB2-219ENST00000639738 SCRIBQ14160 1630 aa39.3■■■■□ 3.88
SCARB2-219ENST00000639738 SHROOM4Q9ULL8 1493 aa39.21■■■■□ 3.87
SCARB2-219ENST00000639738 UNC13AQ9UPW8 1703 aa39.19■■■■□ 3.86
SCARB2-219ENST00000639738 BICRAQ9NZM4 1560 aa38.83■■■■□ 3.81
SCARB2-219ENST00000639738 PABPN1Q86U42 306 aaKnown RBP eCLIP38.55■■■■□ 3.76
SCARB2-219ENST00000639738 DNAJC5BQ9UF47 199 aa38.54■■■■□ 3.76
SCARB2-219ENST00000639738 CECR2Q9BXF3 1484 aa38.03■■■■□ 3.68
SCARB2-219ENST00000639738 BAZ1AQ9NRL2 1556 aaPredicted RBP37.77■■■■□ 3.64
SCARB2-219ENST00000639738 MROH2BQ7Z745 1585 aa37.74■■■■□ 3.63
SCARB2-219ENST00000639738 SMARCA4P51532 1647 aa37.72■■■■□ 3.63
SCARB2-219ENST00000639738 RSF1Q96T23 1441 aaPredicted RBP37.66■■■■□ 3.62
SCARB2-219ENST00000639738 EIF4G1Q04637 1599 aaKnown RBP37.62■■■■□ 3.61
SCARB2-219ENST00000639738 CC2D2AQ9P2K1 1620 aa37.49■■■■□ 3.59
SCARB2-219ENST00000639738 WIZO95785 1651 aa37.39■■■■□ 3.58
SCARB2-219ENST00000639738 SUPT5HO00267 1087 aaKnown RBP37.38■■■■□ 3.57
SCARB2-219ENST00000639738 PEG3Q9GZU2 1588 aa37.37■■■■□ 3.57
SCARB2-219ENST00000639738 ATAD2BQ9ULI0 1458 aa37.26■■■■□ 3.55
SCARB2-219ENST00000639738 SMARCA2P51531 1590 aa37.19■■■■□ 3.54
SCARB2-219ENST00000639738 NCAPD3P42695 1498 aa37.08■■■■□ 3.53
SCARB2-219ENST00000639738 TOP2AP11388 1531 aaKnown RBP36.99■■■■□ 3.51
SCARB2-219ENST00000639738 HMGXB3Q12766 1538 aa36.96■■■■□ 3.51
SCARB2-219ENST00000639738 BAZ1BQ9UIG0 1483 aaKnown RBP36.93■■■■□ 3.5
SCARB2-219ENST00000639738 CCDC88BA6NC98 1476 aa36.59■■■■□ 3.45
SCARB2-219ENST00000639738 CFTRP13569 1480 aa36.06■■■■□ 3.36
SCARB2-219ENST00000639738 CADPSQ9ULU8 1353 aa36.02■■■■□ 3.36
SCARB2-219ENST00000639738 NESP48681 1621 aa35.9■■■■□ 3.34
SCARB2-219ENST00000639738 LAMC3Q9Y6N6 1575 aa35.89■■■■□ 3.34
SCARB2-219ENST00000639738 PRDM2Q13029 1718 aa35.88■■■■□ 3.33
SCARB2-219ENST00000639738 ERCC6Q03468 1493 aa35.74■■■■□ 3.31
SCARB2-219ENST00000639738 CUX2O14529 1486 aa35.61■■■■□ 3.29
SCARB2-219ENST00000639738 CHIC1Q5VXU3 224 aa35.6■■■■□ 3.29
SCARB2-219ENST00000639738 FANCD2Q9BXW9 1451 aa35.59■■■■□ 3.29
SCARB2-219ENST00000639738 ABCC8Q09428 1581 aa35.57■■■■□ 3.28
SCARB2-219ENST00000639738 PDS5BQ9NTI5 1447 aa35.56■■■■□ 3.28
SCARB2-219ENST00000639738 KIF21AQ7Z4S6 1674 aa35.5■■■■□ 3.27
SCARB2-219ENST00000639738 CEP164Q9UPV0 1460 aa35.41■■■■□ 3.26
SCARB2-219ENST00000639738 WRNQ14191 1432 aaPredicted RBP eCLIP35.41■■■■□ 3.26
SCARB2-219ENST00000639738 SYNJ1O43426 1573 aa35.35■■■■□ 3.25
SCARB2-219ENST00000639738 THOC2Q8NI27 1593 aaKnown RBP35.34■■■■□ 3.25
SCARB2-219ENST00000639738 CUX1P39880 1505 aa35.33■■■■□ 3.25
SCARB2-219ENST00000639738 TOP2BQ02880 1626 aa35.28■■■■□ 3.24
SCARB2-219ENST00000639738 BIVM-ERCC5R4GMW8 1640 aa35.28■■■■□ 3.24
SCARB2-219ENST00000639738 URB2Q14146 1524 aaKnown RBP35.24■■■■□ 3.23
SCARB2-219ENST00000639738 TRIM41Q8WV44 630 aa35.23■■■■□ 3.23
SCARB2-219ENST00000639738 DNAJC5Q9H3Z4 198 aa35.21■■■■□ 3.23
SCARB2-219ENST00000639738 DNMBPQ6XZF7 1577 aa35.2■■■■□ 3.23
SCARB2-219ENST00000639738 TOPBP1Q92547 1522 aa35.17■■■■□ 3.22
SCARB2-219ENST00000639738 MRC2Q9UBG0 1479 aa35.17■■■■□ 3.22
SCARB2-219ENST00000639738 WDR62O43379 1518 aa35.07■■■■□ 3.2
SCARB2-219ENST00000639738 FGD5Q6ZNL6 1462 aa34.99■■■■□ 3.19
SCARB2-219ENST00000639738 POLA1P09884 1462 aaPredicted RBP34.95■■■■□ 3.19
SCARB2-219ENST00000639738 RAD54L2Q9Y4B4 1467 aa34.8■■■■□ 3.16
SCARB2-219ENST00000639738 SOGA1O94964 1423 aa34.78■■■■□ 3.16
SCARB2-219ENST00000639738 TARBP1Q13395 1621 aaKnown RBP34.77■■■■□ 3.16
SCARB2-219ENST00000639738 WDR97A6NE52 1622 aa34.73■■■■□ 3.15
SCARB2-219ENST00000639738 RUSC2Q8N2Y8 1516 aa34.72■■■■□ 3.15
SCARB2-219ENST00000639738 ABCA10Q8WWZ4 1543 aa34.72■■■■□ 3.15
SCARB2-219ENST00000639738 IFT140Q96RY7 1462 aa34.64■■■■□ 3.14
SCARB2-219ENST00000639738 EEA1Q15075 1411 aa34.58■■■■□ 3.13
SCARB2-219ENST00000639738 KIF27Q86VH2 1401 aa34.55■■■■□ 3.12
SCARB2-219ENST00000639738 ABCA5Q8WWZ7 1642 aa34.52■■■■□ 3.12
SCARB2-219ENST00000639738 FAM9AQ8IZU1 332 aaPredicted RBP34.5■■■■□ 3.11
SCARB2-219ENST00000639738 TDRD9Q8NDG6 1382 aaKnown RBP34.48■■■■□ 3.11
SCARB2-219ENST00000639738 ZNF608Q9ULD9 1512 aaPredicted RBP34.48■■■■□ 3.11
SCARB2-219ENST00000639738 CSRNP3Q8WYN3 585 aa34.41■■■■□ 3.1
SCARB2-219ENST00000639738 GAPVD1Q14C86 1478 aa34.4■■■■□ 3.1
SCARB2-219ENST00000639738 AQRO60306 1485 aaKnown RBP eCLIP34.39■■■■□ 3.1
SCARB2-219ENST00000639738 IGF1RP08069 1367 aa34.39■■■■□ 3.1
SCARB2-219ENST00000639738 EIF4G3O43432 1585 aaKnown RBP34.36■■■■□ 3.09
SCARB2-219ENST00000639738 PBRM1Q86U86 1689 aa34.3■■■■□ 3.08
SCARB2-219ENST00000639738 ERICH3Q5RHP9 1530 aa34.3■■■■□ 3.08
SCARB2-219ENST00000639738 PRXQ9BXM0 1461 aa34.26■■■■□ 3.07
SCARB2-219ENST00000639738 GRIN2BQ13224 1484 aa34.23■■■■□ 3.07
SCARB2-219ENST00000639738 KIF21BO75037 1637 aa34.22■■■■□ 3.07
SCARB2-219ENST00000639738 CUL7Q14999 1698 aa34.17■■■■□ 3.06
SCARB2-219ENST00000639738 LOC105371045A0A1W2PR82 267 aa34.14■■■■□ 3.06
SCARB2-219ENST00000639738 CARMIL1Q5VZK9 1371 aa34.14■■■■□ 3.06
SCARB2-219ENST00000639738 RAPGEF2Q9Y4G8 1499 aa34.09■■■■□ 3.05
SCARB2-219ENST00000639738 ADAMTS12P58397 1594 aa34.08■■■■□ 3.05
SCARB2-219ENST00000639738 SNAPC4Q5SXM2 1469 aa34.07■■■■□ 3.04
SCARB2-219ENST00000639738 GOLGA3Q08378 1498 aa34.04■■■■□ 3.04
SCARB2-219ENST00000639738 MAGI1Q96QZ7 1491 aaPredicted RBP34.04■■■■□ 3.04
SCARB2-219ENST00000639738 FHAD1B1AJZ9 1412 aa34.03■■■■□ 3.04
SCARB2-219ENST00000639738 EHMT2Q96KQ7 1210 aa33.94■■■■□ 3.02
SCARB2-219ENST00000639738 OSCARQ8IYS5 282 aa33.94■■■■□ 3.02
SCARB2-219ENST00000639738 SYNJ2O15056 1496 aa33.9■■■■□ 3.02
SCARB2-219ENST00000639738 TNIKQ9UKE5 1360 aa33.85■■■■□ 3.01
SCARB2-219ENST00000639738 GRIN2AQ12879 1464 aa33.83■■■■□ 3.01
SCARB2-219ENST00000639738 UBTFP17480 764 aaKnown RBP33.79■■■■□ 3
SCARB2-219ENST00000639738 CHD1O14646 1710 aa33.75■■■□□ 2.99
SCARB2-219ENST00000639738 CHMP7Q8WUX9 453 aaPredicted RBP33.74■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms