RNA–Protein interactions for RNA: ENST00000328089.10

SPSB1-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB1, Length 3,120 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB1-201ENST00000328089 NISCHQ9Y2I1 1504 aa38.11■■■■□ 3.69
SPSB1-201ENST00000328089 SHROOM4Q9ULL8 1493 aa33.9■■■■□ 3.02
SPSB1-201ENST00000328089 DCAF8L2P0C7V8 631 aa33.35■■■□□ 2.93
SPSB1-201ENST00000328089 SUPT5HO00267 1087 aaKnown RBP33.31■■■□□ 2.92
SPSB1-201ENST00000328089 ZCCHC6Q5VYS8 1495 aaKnown RBP32.1■■■□□ 2.73
SPSB1-201ENST00000328089 CHIC1Q5VXU3 224 aa31.76■■■□□ 2.68
SPSB1-201ENST00000328089 CCDC180Q9P1Z9 1646 aa31.71■■■□□ 2.67
SPSB1-201ENST00000328089 MYO15BQ96JP2 1530 aa31.52■■■□□ 2.64
SPSB1-201ENST00000328089 LOC105371045A0A1W2PR82 267 aa31.35■■■□□ 2.61
SPSB1-201ENST00000328089 PCGF6Q9BYE7 350 aa31.34■■■□□ 2.61
SPSB1-201ENST00000328089 EHMT2Q96KQ7 1210 aa31.25■■■□□ 2.59
SPSB1-201ENST00000328089 FAM9AQ8IZU1 332 aaPredicted RBP31.01■■■□□ 2.55
SPSB1-201ENST00000328089 PPARGC1BQ86YN6 1023 aaKnown RBP30.82■■■□□ 2.53
SPSB1-201ENST00000328089 HRCP23327 699 aa30.78■■■□□ 2.52
SPSB1-201ENST00000328089 SCRIBQ14160 1630 aa30.75■■■□□ 2.51
SPSB1-201ENST00000328089 ABCC9O60706 1549 aa30.75■■■□□ 2.51
SPSB1-201ENST00000328089 TRIM41Q8WV44 630 aa30.64■■■□□ 2.5
SPSB1-201ENST00000328089 DCAF1Q9Y4B6 1507 aa30.64■■■□□ 2.5
SPSB1-201ENST00000328089 RSF1Q96T23 1441 aaPredicted RBP30.44■■■□□ 2.46
SPSB1-201ENST00000328089 CECR2Q9BXF3 1484 aa30.21■■■□□ 2.43
SPSB1-201ENST00000328089 TRIM26Q12899 539 aaPredicted RBP30.16■■■□□ 2.42
SPSB1-201ENST00000328089 TTBK1Q5TCY1 1321 aaPredicted RBP30.12■■■□□ 2.41
SPSB1-201ENST00000328089 RB1CC1Q8TDY2 1594 aa30.12■■■□□ 2.41
SPSB1-201ENST00000328089 MROH2BQ7Z745 1585 aa29.9■■■□□ 2.38
SPSB1-201ENST00000328089 PABPN1Q86U42 306 aaKnown RBP eCLIP29.88■■■□□ 2.37
SPSB1-201ENST00000328089 WIZO95785 1651 aa29.69■■■□□ 2.34
SPSB1-201ENST00000328089 NACADO15069 1562 aa29.66■■■□□ 2.34
SPSB1-201ENST00000328089 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.52■■■□□ 2.32
SPSB1-201ENST00000328089 RANGAP1P46060 587 aaPredicted RBP29.48■■■□□ 2.31
SPSB1-201ENST00000328089 UBTFP17480 764 aaKnown RBP29.4■■■□□ 2.3
SPSB1-201ENST00000328089 CCER1Q8TC90 406 aaPredicted RBP29.33■■■□□ 2.29
SPSB1-201ENST00000328089 ABCC8Q09428 1581 aa29.33■■■□□ 2.29
SPSB1-201ENST00000328089 ZEB1P37275 1124 aaPredicted RBP29.24■■■□□ 2.27
SPSB1-201ENST00000328089 CCDC88BA6NC98 1476 aa29.22■■■□□ 2.27
SPSB1-201ENST00000328089 BAZ1AQ9NRL2 1556 aaPredicted RBP29.19■■■□□ 2.26
SPSB1-201ENST00000328089 SOGA1O94964 1423 aa29.16■■■□□ 2.26
SPSB1-201ENST00000328089 RUSC2Q8N2Y8 1516 aa29.03■■■□□ 2.24
SPSB1-201ENST00000328089 CSRNP3Q8WYN3 585 aa29.03■■■□□ 2.24
SPSB1-201ENST00000328089 SMARCA4P51532 1647 aa28.94■■■□□ 2.22
SPSB1-201ENST00000328089 HNRNPUL2Q1KMD3 747 aaKnown RBP28.91■■■□□ 2.22
SPSB1-201ENST00000328089 TOP2AP11388 1531 aaKnown RBP28.9■■■□□ 2.22
SPSB1-201ENST00000328089 CEP162Q5TB80 1403 aa28.88■■■□□ 2.21
SPSB1-201ENST00000328089 SMARCA2P51531 1590 aa28.84■■■□□ 2.21
SPSB1-201ENST00000328089 UNC13AQ9UPW8 1703 aa28.71■■■□□ 2.19
SPSB1-201ENST00000328089 EIF4G1Q04637 1599 aaKnown RBP28.69■■■□□ 2.18
SPSB1-201ENST00000328089 WRNQ14191 1432 aaPredicted RBP eCLIP28.68■■■□□ 2.18
SPSB1-201ENST00000328089 APLP2Q06481 763 aa28.63■■■□□ 2.17
SPSB1-201ENST00000328089 SCAF1Q9H7N4 1312 aaKnown RBP28.61■■■□□ 2.17
SPSB1-201ENST00000328089 TNIKQ9UKE5 1360 aa28.6■■■□□ 2.17
SPSB1-201ENST00000328089 DIEXFQ68CQ4 756 aaKnown RBP28.58■■■□□ 2.17
SPSB1-201ENST00000328089 BICRAQ9NZM4 1560 aa28.55■■■□□ 2.16
SPSB1-201ENST00000328089 YTHDC1Q96MU7 727 aaKnown RBP28.52■■■□□ 2.16
SPSB1-201ENST00000328089 BAZ1BQ9UIG0 1483 aaKnown RBP28.46■■■□□ 2.15
SPSB1-201ENST00000328089 GOLGA3Q08378 1498 aa28.43■■■□□ 2.14
SPSB1-201ENST00000328089 ATAD2BQ9ULI0 1458 aa28.42■■■□□ 2.14
SPSB1-201ENST00000328089 NEUROD1Q13562 356 aa28.38■■■□□ 2.13
SPSB1-201ENST00000328089 CLIP1P30622 1438 aa28.38■■■□□ 2.13
SPSB1-201ENST00000328089 ITGAEP38570 1179 aa28.38■■■□□ 2.13
SPSB1-201ENST00000328089 SYNJ1O43426 1573 aa28.36■■■□□ 2.13
SPSB1-201ENST00000328089 RAPGEF2Q9Y4G8 1499 aa28.31■■■□□ 2.12
SPSB1-201ENST00000328089 EEA1Q15075 1411 aa28.31■■■□□ 2.12
SPSB1-201ENST00000328089 CEP164Q9UPV0 1460 aa28.22■■■□□ 2.11
SPSB1-201ENST00000328089 ATP1B4Q9UN42 357 aaPredicted RBP28.19■■■□□ 2.1
SPSB1-201ENST00000328089 ACIN1Q9UKV3 1341 aaKnown RBP28.17■■■□□ 2.1
SPSB1-201ENST00000328089 ZNF316A6NFI3 1004 aaPredicted RBP28.17■■■□□ 2.1
SPSB1-201ENST00000328089 GTF3C3Q9Y5Q9 886 aa28.16■■■□□ 2.1
SPSB1-201ENST00000328089 KANK4Q5T7N3 995 aaPredicted RBP28.14■■■□□ 2.09
SPSB1-201ENST00000328089 P3H3Q8IVL6 736 aa28.08■■■□□ 2.09
SPSB1-201ENST00000328089 CENPBP07199 599 aaPredicted RBP28.05■■■□□ 2.08
SPSB1-201ENST00000328089 MIER1Q8N108 512 aa28.04■■■□□ 2.08
SPSB1-201ENST00000328089 VPS8Q8N3P4 1428 aa28.03■■■□□ 2.08
SPSB1-201ENST00000328089 PEG3Q9GZU2 1588 aa27.95■■■□□ 2.06
SPSB1-201ENST00000328089 KIF21BO75037 1637 aa27.87■■■□□ 2.05
SPSB1-201ENST00000328089 KIF27Q86VH2 1401 aa27.76■■■□□ 2.03
SPSB1-201ENST00000328089 FAM50AQ14320 339 aaKnown RBP27.75■■■□□ 2.03
SPSB1-201ENST00000328089 CUX1P39880 1505 aa27.74■■■□□ 2.03
SPSB1-201ENST00000328089 TOP2BQ02880 1626 aa27.73■■■□□ 2.03
SPSB1-201ENST00000328089 ARAP1Q96P48 1450 aa27.72■■■□□ 2.03
SPSB1-201ENST00000328089 CUX2O14529 1486 aa27.67■■■□□ 2.02
SPSB1-201ENST00000328089 NCAPD3P42695 1498 aa27.65■■■□□ 2.02
SPSB1-201ENST00000328089 PRXQ9BXM0 1461 aa27.64■■■□□ 2.02
SPSB1-201ENST00000328089 DHX57Q6P158 1386 aaKnown RBP27.56■■■□□ 2
SPSB1-201ENST00000328089 HIRIP3Q9BW71 556 aaPredicted RBP27.56■■■□□ 2
SPSB1-201ENST00000328089 IGF1RP08069 1367 aa27.53■■■□□ 2
SPSB1-201ENST00000328089 CFTRP13569 1480 aa27.52■■■□□ 2
SPSB1-201ENST00000328089 CARMIL1Q5VZK9 1371 aa27.51■■□□□ 1.99
SPSB1-201ENST00000328089 SIN3AQ96ST3 1273 aa27.49■■□□□ 1.99
SPSB1-201ENST00000328089 ARID3CA6NKF2 412 aa27.49■■□□□ 1.99
SPSB1-201ENST00000328089 ARHGAP35Q9NRY4 1499 aa27.48■■□□□ 1.99
SPSB1-201ENST00000328089 CCNB3Q8WWL7 1395 aa27.48■■□□□ 1.99
SPSB1-201ENST00000328089 CADPSQ9ULU8 1353 aa27.46■■□□□ 1.99
SPSB1-201ENST00000328089 DNAJC5BQ9UF47 199 aa27.45■■□□□ 1.99
SPSB1-201ENST00000328089 BIVM-ERCC5R4GMW8 1640 aa27.41■■□□□ 1.98
SPSB1-201ENST00000328089 HMGXB3Q12766 1538 aa27.39■■□□□ 1.97
SPSB1-201ENST00000328089 KCNH8Q96L42 1107 aa27.38■■□□□ 1.97
SPSB1-201ENST00000328089 FGD5Q6ZNL6 1462 aa27.38■■□□□ 1.97
SPSB1-201ENST00000328089 RAD54L2Q9Y4B4 1467 aa27.37■■□□□ 1.97
SPSB1-201ENST00000328089 PELP1Q8IZL8 1130 aaKnown RBP27.36■■□□□ 1.97
SPSB1-201ENST00000328089 ERICH3Q5RHP9 1530 aa27.36■■□□□ 1.97
SPSB1-201ENST00000328089 RAB3GAP2Q9H2M9 1393 aa27.34■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms