RNA–Protein interactions for RNA: ENST00000376495.4

OTUD1-201, Transcript of OTU deubiquitinase 1, humanhuman

APPRIS P1 BASIC

Gene OTUD1, Length 2,933 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUD1-201ENST00000376495 NISCHQ9Y2I1 1504 aa38.41■■■■□ 3.74
OTUD1-201ENST00000376495 SHROOM4Q9ULL8 1493 aa33.59■■■□□ 2.97
OTUD1-201ENST00000376495 SUPT5HO00267 1087 aaKnown RBP33.04■■■□□ 2.88
OTUD1-201ENST00000376495 DCAF8L2P0C7V8 631 aa32.76■■■□□ 2.83
OTUD1-201ENST00000376495 ZCCHC6Q5VYS8 1495 aaKnown RBP32.43■■■□□ 2.78
OTUD1-201ENST00000376495 CCDC180Q9P1Z9 1646 aa32.21■■■□□ 2.75
OTUD1-201ENST00000376495 CHIC1Q5VXU3 224 aa31.86■■■□□ 2.69
OTUD1-201ENST00000376495 MYO15BQ96JP2 1530 aa31.7■■■□□ 2.67
OTUD1-201ENST00000376495 PCGF6Q9BYE7 350 aa31.29■■■□□ 2.6
OTUD1-201ENST00000376495 LOC105371045A0A1W2PR82 267 aa31.22■■■□□ 2.59
OTUD1-201ENST00000376495 DCAF1Q9Y4B6 1507 aa31.17■■■□□ 2.58
OTUD1-201ENST00000376495 HRCP23327 699 aa31.08■■■□□ 2.57
OTUD1-201ENST00000376495 PPARGC1BQ86YN6 1023 aaKnown RBP30.79■■■□□ 2.52
OTUD1-201ENST00000376495 SCRIBQ14160 1630 aa30.77■■■□□ 2.52
OTUD1-201ENST00000376495 EHMT2Q96KQ7 1210 aa30.65■■■□□ 2.5
OTUD1-201ENST00000376495 FAM9AQ8IZU1 332 aaPredicted RBP30.64■■■□□ 2.5
OTUD1-201ENST00000376495 RSF1Q96T23 1441 aaPredicted RBP30.6■■■□□ 2.49
OTUD1-201ENST00000376495 ABCC9O60706 1549 aa30.57■■■□□ 2.48
OTUD1-201ENST00000376495 TRIM41Q8WV44 630 aa30.56■■■□□ 2.48
OTUD1-201ENST00000376495 TRIM26Q12899 539 aaPredicted RBP30.35■■■□□ 2.45
OTUD1-201ENST00000376495 RB1CC1Q8TDY2 1594 aa30.29■■■□□ 2.44
OTUD1-201ENST00000376495 CECR2Q9BXF3 1484 aa30.23■■■□□ 2.43
OTUD1-201ENST00000376495 MROH2BQ7Z745 1585 aa30.02■■■□□ 2.4
OTUD1-201ENST00000376495 NACADO15069 1562 aa29.94■■■□□ 2.38
OTUD1-201ENST00000376495 WIZO95785 1651 aa29.85■■■□□ 2.37
OTUD1-201ENST00000376495 TTBK1Q5TCY1 1321 aaPredicted RBP29.63■■■□□ 2.33
OTUD1-201ENST00000376495 ZEB1P37275 1124 aaPredicted RBP29.58■■■□□ 2.33
OTUD1-201ENST00000376495 PABPN1Q86U42 306 aaKnown RBP eCLIP29.45■■■□□ 2.31
OTUD1-201ENST00000376495 BAZ1AQ9NRL2 1556 aaPredicted RBP29.43■■■□□ 2.3
OTUD1-201ENST00000376495 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.42■■■□□ 2.3
OTUD1-201ENST00000376495 ABCC8Q09428 1581 aa29.38■■■□□ 2.29
OTUD1-201ENST00000376495 CCDC88BA6NC98 1476 aa29.3■■■□□ 2.28
OTUD1-201ENST00000376495 CCER1Q8TC90 406 aaPredicted RBP29.28■■■□□ 2.28
OTUD1-201ENST00000376495 UBTFP17480 764 aaKnown RBP29.2■■■□□ 2.27
OTUD1-201ENST00000376495 SOGA1O94964 1423 aa29.19■■■□□ 2.26
OTUD1-201ENST00000376495 SMARCA4P51532 1647 aa29.17■■■□□ 2.26
OTUD1-201ENST00000376495 TOP2AP11388 1531 aaKnown RBP29.17■■■□□ 2.26
OTUD1-201ENST00000376495 EIF4G1Q04637 1599 aaKnown RBP29.16■■■□□ 2.26
OTUD1-201ENST00000376495 SMARCA2P51531 1590 aa29.09■■■□□ 2.25
OTUD1-201ENST00000376495 RUSC2Q8N2Y8 1516 aa29.06■■■□□ 2.24
OTUD1-201ENST00000376495 CSRNP3Q8WYN3 585 aa29.05■■■□□ 2.24
OTUD1-201ENST00000376495 CEP162Q5TB80 1403 aa29.02■■■□□ 2.24
OTUD1-201ENST00000376495 UNC13AQ9UPW8 1703 aa29.02■■■□□ 2.24
OTUD1-201ENST00000376495 RANGAP1P46060 587 aaPredicted RBP28.94■■■□□ 2.22
OTUD1-201ENST00000376495 TNIKQ9UKE5 1360 aa28.84■■■□□ 2.21
OTUD1-201ENST00000376495 SCAF1Q9H7N4 1312 aaKnown RBP28.84■■■□□ 2.21
OTUD1-201ENST00000376495 WRNQ14191 1432 aaPredicted RBP eCLIP28.78■■■□□ 2.2
OTUD1-201ENST00000376495 BICRAQ9NZM4 1560 aa28.74■■■□□ 2.19
OTUD1-201ENST00000376495 HNRNPUL2Q1KMD3 747 aaKnown RBP28.71■■■□□ 2.19
OTUD1-201ENST00000376495 DIEXFQ68CQ4 756 aaKnown RBP28.69■■■□□ 2.18
OTUD1-201ENST00000376495 EEA1Q15075 1411 aa28.65■■■□□ 2.18
OTUD1-201ENST00000376495 GOLGA3Q08378 1498 aa28.64■■■□□ 2.18
OTUD1-201ENST00000376495 SYNJ1O43426 1573 aa28.54■■■□□ 2.16
OTUD1-201ENST00000376495 NEUROD1Q13562 356 aa28.53■■■□□ 2.16
OTUD1-201ENST00000376495 ATAD2BQ9ULI0 1458 aa28.52■■■□□ 2.16
OTUD1-201ENST00000376495 BAZ1BQ9UIG0 1483 aaKnown RBP28.5■■■□□ 2.15
OTUD1-201ENST00000376495 APLP2Q06481 763 aa28.49■■■□□ 2.15
OTUD1-201ENST00000376495 CLIP1P30622 1438 aa28.47■■■□□ 2.15
OTUD1-201ENST00000376495 CEP164Q9UPV0 1460 aa28.44■■■□□ 2.14
OTUD1-201ENST00000376495 ACIN1Q9UKV3 1341 aaKnown RBP28.43■■■□□ 2.14
OTUD1-201ENST00000376495 RAPGEF2Q9Y4G8 1499 aa28.39■■■□□ 2.14
OTUD1-201ENST00000376495 PEG3Q9GZU2 1588 aa28.38■■■□□ 2.13
OTUD1-201ENST00000376495 ZNF316A6NFI3 1004 aaPredicted RBP28.34■■■□□ 2.13
OTUD1-201ENST00000376495 YTHDC1Q96MU7 727 aaKnown RBP28.33■■■□□ 2.13
OTUD1-201ENST00000376495 GTF3C3Q9Y5Q9 886 aa28.28■■■□□ 2.12
OTUD1-201ENST00000376495 CENPBP07199 599 aaPredicted RBP28.25■■■□□ 2.11
OTUD1-201ENST00000376495 VPS8Q8N3P4 1428 aa28.24■■■□□ 2.11
OTUD1-201ENST00000376495 KIF21BO75037 1637 aa28.21■■■□□ 2.11
OTUD1-201ENST00000376495 MIER1Q8N108 512 aa28.11■■■□□ 2.09
OTUD1-201ENST00000376495 KANK4Q5T7N3 995 aaPredicted RBP28.09■■■□□ 2.09
OTUD1-201ENST00000376495 ITGAEP38570 1179 aa28.03■■■□□ 2.08
OTUD1-201ENST00000376495 TOP2BQ02880 1626 aa28.02■■■□□ 2.08
OTUD1-201ENST00000376495 PELP1Q8IZL8 1130 aaKnown RBP27.98■■■□□ 2.07
OTUD1-201ENST00000376495 PRXQ9BXM0 1461 aa27.89■■■□□ 2.06
OTUD1-201ENST00000376495 CUX1P39880 1505 aa27.88■■■□□ 2.05
OTUD1-201ENST00000376495 ARAP1Q96P48 1450 aa27.86■■■□□ 2.05
OTUD1-201ENST00000376495 KIF27Q86VH2 1401 aa27.85■■■□□ 2.05
OTUD1-201ENST00000376495 NCAPD3P42695 1498 aa27.83■■■□□ 2.05
OTUD1-201ENST00000376495 BIVM-ERCC5R4GMW8 1640 aa27.8■■■□□ 2.04
OTUD1-201ENST00000376495 DHX57Q6P158 1386 aaKnown RBP27.76■■■□□ 2.03
OTUD1-201ENST00000376495 ATP1B4Q9UN42 357 aaPredicted RBP27.75■■■□□ 2.03
OTUD1-201ENST00000376495 P3H3Q8IVL6 736 aa27.74■■■□□ 2.03
OTUD1-201ENST00000376495 ERICH3Q5RHP9 1530 aa27.73■■■□□ 2.03
OTUD1-201ENST00000376495 CFTRP13569 1480 aa27.7■■■□□ 2.02
OTUD1-201ENST00000376495 HMGXB3Q12766 1538 aa27.68■■■□□ 2.02
OTUD1-201ENST00000376495 CUX2O14529 1486 aa27.66■■■□□ 2.02
OTUD1-201ENST00000376495 ARHGAP35Q9NRY4 1499 aa27.64■■■□□ 2.02
OTUD1-201ENST00000376495 IGF1RP08069 1367 aa27.6■■■□□ 2.01
OTUD1-201ENST00000376495 CCNB3Q8WWL7 1395 aa27.6■■■□□ 2.01
OTUD1-201ENST00000376495 FAM50AQ14320 339 aaKnown RBP27.55■■■□□ 2
OTUD1-201ENST00000376495 CLSPNQ9HAW4 1339 aa27.53■■■□□ 2
OTUD1-201ENST00000376495 CARMIL1Q5VZK9 1371 aa27.53■■■□□ 2
OTUD1-201ENST00000376495 RRBP1Q9P2E9 1410 aaKnown RBP27.52■■■□□ 2
OTUD1-201ENST00000376495 CADPSQ9ULU8 1353 aa27.49■■□□□ 1.99
OTUD1-201ENST00000376495 RAB3GAP2Q9H2M9 1393 aa27.43■■□□□ 1.98
OTUD1-201ENST00000376495 FGD5Q6ZNL6 1462 aa27.43■■□□□ 1.98
OTUD1-201ENST00000376495 SIN3AQ96ST3 1273 aa27.4■■□□□ 1.98
OTUD1-201ENST00000376495 PHLDB1Q86UU1 1377 aa27.34■■□□□ 1.97
OTUD1-201ENST00000376495 KCNH8Q96L42 1107 aa27.33■■□□□ 1.97
OTUD1-201ENST00000376495 HIRIP3Q9BW71 556 aaPredicted RBP27.31■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms