Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.341e-8■■■□□ 15
LARP4Q71RC2 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.34■□□□□ 0.211e-16■■■□□ 15
LARP4Q71RC2 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC29.02■■■□□ 2.246e-11■■■□□ 15
LARP4Q71RC2 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.396e-11■■■□□ 15
LARP4Q71RC2 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.84■□□□□ 0.776e-11■■■□□ 15
LARP4Q71RC2 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.024e-17■■■□□ 15
LARP4Q71RC2 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC14.13□□□□□ -0.152e-6■■■□□ 15
LARP4Q71RC2 AL020996.2-201ENST00000559265 568 ntTSL 418.32■□□□□ 0.524e-7■■■□□ 15
LARP4Q71RC2 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.114e-7■■■□□ 15
LARP4Q71RC2 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.224e-7■■■□□ 15
LARP4Q71RC2 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.244e-7■■■□□ 15
LARP4Q71RC2 AL020996.2-202ENST00000527604 334 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.054e-7■■■□□ 15
LARP4Q71RC2 SELENON-205ENST00000630065 2994 ntTSL 1 (best) BASIC8.29□□□□□ -1.084e-7■■■□□ 15
LARP4Q71RC2 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.225e-26■■■□□ 15
LARP4Q71RC2 CLU-202ENST00000405140 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.475e-26■■■□□ 15
LARP4Q71RC2 CLU-201ENST00000316403 3080 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.595e-26■■■□□ 15
LARP4Q71RC2 CLU-211ENST00000522299 2807 ntTSL 210.76□□□□□ -0.695e-26■■■□□ 15
LARP4Q71RC2 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC15.44■□□□□ 0.061e-13■■■□□ 15
LARP4Q71RC2 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC13.05□□□□□ -0.321e-13■■■□□ 15
LARP4Q71RC2 GSTK1-201ENST00000358406 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.461e-13■■■□□ 15
LARP4Q71RC2 GSTK1-204ENST00000442394 2219 ntTSL 511.9□□□□□ -0.511e-13■■■□□ 15
LARP4Q71RC2 GSTK1-205ENST00000443571 850 ntTSL 2 BASIC10.97□□□□□ -0.651e-13■■■□□ 15
LARP4Q71RC2 GSTK1-206ENST00000473649 2692 ntTSL 28.67□□□□□ -1.021e-13■■■□□ 15
LARP4Q71RC2 ECI1-202ENST00000561688 705 ntTSL 224.57■■□□□ 1.523e-7■■■□□ 15
LARP4Q71RC2 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.273e-7■■■□□ 15
LARP4Q71RC2 P3H3-211ENST00000612048 2129 ntTSL 1 (best)16.85■□□□□ 0.293e-7■■■□□ 15
LARP4Q71RC2 P3H3-202ENST00000536140 3226 ntTSL 213.59□□□□□ -0.233e-7■■■□□ 15
LARP4Q71RC2 CHMP1A-206ENST00000549139 812 ntTSL 214.44□□□□□ -0.16e-9■■■□□ 14.9
LARP4Q71RC2 ERGIC3-216ENST00000488384 766 ntTSL 214.74□□□□□ -0.052e-7■■■□□ 14.9
LARP4Q71RC2 ERGIC3-210ENST00000451605 520 ntTSL 28.83□□□□□ -12e-7■■■□□ 14.9
LARP4Q71RC2 ABO-201ENST00000453660 6341 ntTSL 1 (best)12.42□□□□□ -0.422e-7■■■□□ 14.9
LARP4Q71RC2 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC13.7□□□□□ -0.222e-6■■■□□ 14.9
LARP4Q71RC2 CDC45-201ENST00000263201 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.332e-6■■■□□ 14.9
LARP4Q71RC2 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC12.42□□□□□ -0.422e-6■■■□□ 14.9
LARP4Q71RC2 CDC45-212ENST00000493724 469 ntTSL 212.02□□□□□ -0.492e-6■■■□□ 14.9
LARP4Q71RC2 CDC45-203ENST00000407835 2090 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.662e-6■■■□□ 14.9
LARP4Q71RC2 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC22.92■■□□□ 1.261e-19■■■□□ 14.9
LARP4Q71RC2 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC13.23□□□□□ -0.291e-19■■■□□ 14.9
LARP4Q71RC2 RPL27A-212ENST00000534599 651 ntTSL 512.06□□□□□ -0.481e-19■■■□□ 14.9
LARP4Q71RC2 RPL27A-201ENST00000314138 4916 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.571e-19■■■□□ 14.9
LARP4Q71RC2 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC6.67□□□□□ -1.341e-19■■■□□ 14.9
LARP4Q71RC2 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.373e-7■■■□□ 14.9
LARP4Q71RC2 PPT1-215ENST00000641471 2368 ntBASIC15.85■□□□□ 0.132e-8■■■□□ 14.9
LARP4Q71RC2 PPT1-212ENST00000641236 2481 nt14.69□□□□□ -0.062e-8■■■□□ 14.9
LARP4Q71RC2 PPT1-213ENST00000641319 2388 ntBASIC14.26□□□□□ -0.132e-8■■■□□ 14.9
LARP4Q71RC2 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.192e-8■■■□□ 14.9
LARP4Q71RC2 PPT1-217ENST00000641691 2253 nt13.79□□□□□ -0.22e-8■■■□□ 14.9
LARP4Q71RC2 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC13.78□□□□□ -0.22e-8■■■□□ 14.9
LARP4Q71RC2 PPT1-204ENST00000439754 2195 ntTSL 3 BASIC13.49□□□□□ -0.252e-8■■■□□ 14.9
LARP4Q71RC2 PPT1-210ENST00000530704 2340 ntTSL 1 (best)13.3□□□□□ -0.282e-8■■■□□ 14.9
LARP4Q71RC2 PPT1-211ENST00000641083 2353 nt11.76□□□□□ -0.532e-8■■■□□ 14.9
LARP4Q71RC2 PPT1-219ENST00000642050 4010 ntAPPRIS P2 BASIC11.56□□□□□ -0.562e-8■■■□□ 14.9
LARP4Q71RC2 PPT1-209ENST00000530076 1872 ntTSL 2 BASIC9.83□□□□□ -0.842e-8■■■□□ 14.9
LARP4Q71RC2 PDLIM2-218ENST00000614502 599 ntTSL 2 BASIC11.05□□□□□ -0.643e-7■■■□□ 14.9
LARP4Q71RC2 OAZ1-210ENST00000593012 1357 ntTSL 217.95■□□□□ 0.462e-11■■■□□ 14.9
LARP4Q71RC2 OAZ1-201ENST00000581150 1131 ntTSL 515.86■□□□□ 0.132e-11■■■□□ 14.9
LARP4Q71RC2 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.12e-11■■■□□ 14.9
LARP4Q71RC2 NCAPG2-201ENST00000356309 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.542e-18■■■□□ 14.9
LARP4Q71RC2 NCAPG2-203ENST00000409423 3957 ntAPPRIS P1 TSL 2 BASIC9.13□□□□□ -0.952e-18■■■□□ 14.9
LARP4Q71RC2 NCAPG2-205ENST00000441982 2926 ntTSL 28.31□□□□□ -1.082e-18■■■□□ 14.9
LARP4Q71RC2 NCAPG2-204ENST00000432615 4134 ntTSL 58.18□□□□□ -1.12e-18■■■□□ 14.9
LARP4Q71RC2 LIME1-210ENST00000621325 2410 ntTSL 221.08■□□□□ 0.975e-8■■■□□ 14.9
LARP4Q71RC2 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.445e-8■■■□□ 14.9
LARP4Q71RC2 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.13■□□□□ 0.175e-8■■■□□ 14.9
LARP4Q71RC2 LIME1-209ENST00000494776 391 ntTSL 514.63□□□□□ -0.075e-8■■■□□ 14.9
LARP4Q71RC2 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.185e-8■■■□□ 14.9
LARP4Q71RC2 CAPNS1-214ENST00000592483 431 ntTSL 522.24■■□□□ 1.155e-10■■■□□ 14.9
LARP4Q71RC2 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.765e-7■■■□□ 14.9
LARP4Q71RC2 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.745e-7■■■□□ 14.9
LARP4Q71RC2 GALK1-209ENST00000592997 717 ntTSL 217.61■□□□□ 0.415e-7■■■□□ 14.9
LARP4Q71RC2 GALK1-203ENST00000586733 465 ntTSL 216.73■□□□□ 0.275e-7■■■□□ 14.9
LARP4Q71RC2 GALK1-207ENST00000589643 313 ntTSL 313.38□□□□□ -0.275e-7■■■□□ 14.9
LARP4Q71RC2 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.77■□□□□ 0.127e-12■■■□□ 14.9
LARP4Q71RC2 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.511e-6■■■□□ 14.9
LARP4Q71RC2 SEZ6L2-203ENST00000350527 3173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.513e-7■■■□□ 14.9
LARP4Q71RC2 SEZ6L2-202ENST00000346932 3015 ntTSL 1 (best) BASIC10.82□□□□□ -0.683e-7■■■□□ 14.9
LARP4Q71RC2 SEZ6L2-204ENST00000537485 3423 ntAPPRIS ALT2 TSL 2 BASIC10.32□□□□□ -0.763e-7■■■□□ 14.9
LARP4Q71RC2 SEZ6L2-209ENST00000617533 3555 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.773e-7■■■□□ 14.9
LARP4Q71RC2 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.341e-6■■■□□ 14.8
LARP4Q71RC2 ASH1L-201ENST00000368346 11942 ntAPPRIS ALT1 TSL 1 (best) BASIC9.22□□□□□ -0.939e-7■■■□□ 14.8
LARP4Q71RC2 ASH1L-202ENST00000392403 10979 ntAPPRIS P2 TSL 5 BASIC7.56□□□□□ -1.29e-7■■■□□ 14.8
LARP4Q71RC2 NDUFA13-206ENST00000511584 640 ntTSL 213.33□□□□□ -0.288e-10■■■□□ 14.8
LARP4Q71RC2 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.033e-7■■■□□ 14.8
LARP4Q71RC2 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -06e-7■■■□□ 14.8
LARP4Q71RC2 COPG1-210ENST00000515725 3231 ntTSL 28.71□□□□□ -1.022e-6■■■□□ 14.8
LARP4Q71RC2 COPG1-201ENST00000314797 3078 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.072e-6■■■□□ 14.8
LARP4Q71RC2 RPL37A-207ENST00000478153 2082 ntTSL 1 (best)21.02■□□□□ 0.962e-40■■■□□ 14.8
LARP4Q71RC2 RPL37A-212ENST00000600880 425 ntTSL 2 BASIC10.9□□□□□ -0.662e-40■■■□□ 14.8
LARP4Q71RC2 RPL37A-208ENST00000487233 2225 ntTSL 28.7□□□□□ -1.022e-40■■■□□ 14.8
LARP4Q71RC2 RPL37A-209ENST00000490649 1701 ntTSL 1 (best)7.99□□□□□ -1.132e-40■■■□□ 14.8
LARP4Q71RC2 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.342e-40■■■□□ 14.8
LARP4Q71RC2 ECH1-215ENST00000601333 710 ntTSL 213.68□□□□□ -0.229e-13■■■□□ 14.8
LARP4Q71RC2 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.66□□□□□ -0.066e-7■■■□□ 14.8
LARP4Q71RC2 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC13.49□□□□□ -0.256e-7■■■□□ 14.8
LARP4Q71RC2 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.446e-7■■■□□ 14.8
LARP4Q71RC2 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.69■□□□□ 0.12e-6■■■□□ 14.8
LARP4Q71RC2 PSMF1-203ENST00000335877 4290 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.852e-6■■■□□ 14.8
LARP4Q71RC2 PSMF1-202ENST00000333082 3686 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.922e-6■■■□□ 14.8
LARP4Q71RC2 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC24.63■■□□□ 1.534e-10■■■□□ 14.8
LARP4Q71RC2 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.32■□□□□ 0.524e-10■■■□□ 14.8
Retrieved 100 of 15,922 protein–RNA pairs in 235.4 ms