RNA–Protein interactions for RNA: ENST00000316403.14

CLU-201, Transcript of clusterin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLU, Length 3,080 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLU-201ENST00000316403 NISCHQ9Y2I1 1504 aa22.5■■□□□ 1.19
CLU-201ENST00000316403 CCDC180Q9P1Z9 1646 aa20.41■□□□□ 0.86
CLU-201ENST00000316403 SHROOM4Q9ULL8 1493 aa19.63■□□□□ 0.73
CLU-201ENST00000316403 SUPT5HO00267 1087 aaKnown RBP19.4■□□□□ 0.7
CLU-201ENST00000316403 MYO15BQ96JP2 1530 aa19.18■□□□□ 0.66
CLU-201ENST00000316403 ZCCHC6Q5VYS8 1495 aaKnown RBP19.09■□□□□ 0.65
CLU-201ENST00000316403 ABCC9O60706 1549 aa19.05■□□□□ 0.64
CLU-201ENST00000316403 NACADO15069 1562 aa18.97■□□□□ 0.63
CLU-201ENST00000316403 HRCP23327 699 aa18.95■□□□□ 0.62
CLU-201ENST00000316403 CHIC1Q5VXU3 224 aa18.95■□□□□ 0.62
CLU-201ENST00000316403 DCAF1Q9Y4B6 1507 aa18.95■□□□□ 0.62
CLU-201ENST00000316403 RB1CC1Q8TDY2 1594 aa18.89■□□□□ 0.62
CLU-201ENST00000316403 DCAF8L2P0C7V8 631 aa18.77■□□□□ 0.6
CLU-201ENST00000316403 PCGF6Q9BYE7 350 aa18.77■□□□□ 0.6
CLU-201ENST00000316403 UNC13AQ9UPW8 1703 aa18.66■□□□□ 0.58
CLU-201ENST00000316403 PPARGC1BQ86YN6 1023 aaKnown RBP18.6■□□□□ 0.57
CLU-201ENST00000316403 LOC105371045A0A1W2PR82 267 aa18.47■□□□□ 0.55
CLU-201ENST00000316403 BICRAQ9NZM4 1560 aa18.38■□□□□ 0.53
CLU-201ENST00000316403 TRIM26Q12899 539 aaPredicted RBP18.26■□□□□ 0.51
CLU-201ENST00000316403 TRIM41Q8WV44 630 aa17.99■□□□□ 0.47
CLU-201ENST00000316403 ZEB1P37275 1124 aaPredicted RBP17.98■□□□□ 0.47
CLU-201ENST00000316403 RSF1Q96T23 1441 aaPredicted RBP17.98■□□□□ 0.47
CLU-201ENST00000316403 FAM9AQ8IZU1 332 aaPredicted RBP17.95■□□□□ 0.46
CLU-201ENST00000316403 SCRIBQ14160 1630 aa17.91■□□□□ 0.46
CLU-201ENST00000316403 EHMT2Q96KQ7 1210 aa17.86■□□□□ 0.45
CLU-201ENST00000316403 EIF4G1Q04637 1599 aaKnown RBP17.75■□□□□ 0.43
CLU-201ENST00000316403 SCAF1Q9H7N4 1312 aaKnown RBP17.71■□□□□ 0.43
CLU-201ENST00000316403 PELP1Q8IZL8 1130 aaKnown RBP17.67■□□□□ 0.42
CLU-201ENST00000316403 CC2D2AQ9P2K1 1620 aa17.66■□□□□ 0.42
CLU-201ENST00000316403 CECR2Q9BXF3 1484 aa17.61■□□□□ 0.41
CLU-201ENST00000316403 PEG3Q9GZU2 1588 aa17.6■□□□□ 0.41
CLU-201ENST00000316403 MROH2BQ7Z745 1585 aa17.55■□□□□ 0.4
CLU-201ENST00000316403 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.54■□□□□ 0.4
CLU-201ENST00000316403 DNAJC5BQ9UF47 199 aa17.51■□□□□ 0.39
CLU-201ENST00000316403 CCER1Q8TC90 406 aaPredicted RBP17.5■□□□□ 0.39
CLU-201ENST00000316403 WIZO95785 1651 aa17.48■□□□□ 0.39
CLU-201ENST00000316403 HMGXB3Q12766 1538 aa17.45■□□□□ 0.38
CLU-201ENST00000316403 PABPN1Q86U42 306 aaKnown RBP eCLIP17.42■□□□□ 0.38
CLU-201ENST00000316403 SMARCA4P51532 1647 aa17.41■□□□□ 0.38
CLU-201ENST00000316403 ACIN1Q9UKV3 1341 aaKnown RBP17.41■□□□□ 0.38
CLU-201ENST00000316403 SMARCA2P51531 1590 aa17.4■□□□□ 0.38
CLU-201ENST00000316403 NEUROD1Q13562 356 aa17.38■□□□□ 0.37
CLU-201ENST00000316403 NCAPD3P42695 1498 aa17.38■□□□□ 0.37
CLU-201ENST00000316403 TTBK1Q5TCY1 1321 aaPredicted RBP17.37■□□□□ 0.37
CLU-201ENST00000316403 BAZ1AQ9NRL2 1556 aaPredicted RBP17.35■□□□□ 0.37
CLU-201ENST00000316403 DIEXFQ68CQ4 756 aaKnown RBP17.32■□□□□ 0.36
CLU-201ENST00000316403 ABCC8Q09428 1581 aa17.25■□□□□ 0.35
CLU-201ENST00000316403 CENPBP07199 599 aaPredicted RBP17.25■□□□□ 0.35
CLU-201ENST00000316403 GTF3C3Q9Y5Q9 886 aa17.24■□□□□ 0.35
CLU-201ENST00000316403 CCDC88BA6NC98 1476 aa17.24■□□□□ 0.35
CLU-201ENST00000316403 WRNQ14191 1432 aaPredicted RBP eCLIP17.24■□□□□ 0.35
CLU-201ENST00000316403 CEP162Q5TB80 1403 aa17.23■□□□□ 0.35
CLU-201ENST00000316403 ATAD2BQ9ULI0 1458 aa17.2■□□□□ 0.34
CLU-201ENST00000316403 SOGA1O94964 1423 aa17.17■□□□□ 0.34
CLU-201ENST00000316403 TOP2AP11388 1531 aaKnown RBP17.16■□□□□ 0.34
CLU-201ENST00000316403 TNIKQ9UKE5 1360 aa17.14■□□□□ 0.33
CLU-201ENST00000316403 UBTFP17480 764 aaKnown RBP17.12■□□□□ 0.33
CLU-201ENST00000316403 ZNF316A6NFI3 1004 aaPredicted RBP17.09■□□□□ 0.33
CLU-201ENST00000316403 CSRNP3Q8WYN3 585 aa17.09■□□□□ 0.33
CLU-201ENST00000316403 RUSC2Q8N2Y8 1516 aa17.07■□□□□ 0.32
CLU-201ENST00000316403 PRDM2Q13029 1718 aa17.04■□□□□ 0.32
CLU-201ENST00000316403 EEA1Q15075 1411 aa17.03■□□□□ 0.32
CLU-201ENST00000316403 LAMC3Q9Y6N6 1575 aa17.03■□□□□ 0.32
CLU-201ENST00000316403 YTHDC1Q96MU7 727 aaKnown RBP17.02■□□□□ 0.32
CLU-201ENST00000316403 GOLGA3Q08378 1498 aa16.99■□□□□ 0.31
CLU-201ENST00000316403 HNRNPUL2Q1KMD3 747 aaKnown RBP16.97■□□□□ 0.31
CLU-201ENST00000316403 MIER1Q8N108 512 aa16.92■□□□□ 0.3
CLU-201ENST00000316403 CUX2O14529 1486 aa16.92■□□□□ 0.3
CLU-201ENST00000316403 BAZ1BQ9UIG0 1483 aaKnown RBP16.92■□□□□ 0.3
CLU-201ENST00000316403 THOC2Q8NI27 1593 aaKnown RBP16.88■□□□□ 0.29
CLU-201ENST00000316403 MYT1Q01538 1121 aa16.84■□□□□ 0.29
CLU-201ENST00000316403 CEP164Q9UPV0 1460 aa16.84■□□□□ 0.29
CLU-201ENST00000316403 CLIP1P30622 1438 aa16.84■□□□□ 0.29
CLU-201ENST00000316403 APLP2Q06481 763 aa16.78■□□□□ 0.28
CLU-201ENST00000316403 KIF21BO75037 1637 aa16.78■□□□□ 0.28
CLU-201ENST00000316403 VPS8Q8N3P4 1428 aa16.78■□□□□ 0.28
CLU-201ENST00000316403 SYNJ1O43426 1573 aa16.78■□□□□ 0.28
CLU-201ENST00000316403 RANGAP1P46060 587 aaPredicted RBP16.78■□□□□ 0.28
CLU-201ENST00000316403 KIF21AQ7Z4S6 1674 aa16.73■□□□□ 0.27
CLU-201ENST00000316403 RAPGEF2Q9Y4G8 1499 aa16.71■□□□□ 0.27
CLU-201ENST00000316403 WDR62O43379 1518 aa16.7■□□□□ 0.26
CLU-201ENST00000316403 CFTRP13569 1480 aa16.67■□□□□ 0.26
CLU-201ENST00000316403 CADPSQ9ULU8 1353 aa16.6■□□□□ 0.25
CLU-201ENST00000316403 DHX57Q6P158 1386 aaKnown RBP16.6■□□□□ 0.25
CLU-201ENST00000316403 PDS5BQ9NTI5 1447 aa16.59■□□□□ 0.25
CLU-201ENST00000316403 CLSPNQ9HAW4 1339 aa16.57■□□□□ 0.24
CLU-201ENST00000316403 WDR97A6NE52 1622 aa16.56■□□□□ 0.24
CLU-201ENST00000316403 MRC2Q9UBG0 1479 aa16.53■□□□□ 0.24
CLU-201ENST00000316403 KANK4Q5T7N3 995 aaPredicted RBP16.53■□□□□ 0.24
CLU-201ENST00000316403 NESP48681 1621 aa16.53■□□□□ 0.24
CLU-201ENST00000316403 ARAP1Q96P48 1450 aa16.51■□□□□ 0.23
CLU-201ENST00000316403 SUPT16HQ9Y5B9 1047 aaKnown RBP16.51■□□□□ 0.23
CLU-201ENST00000316403 TOP2BQ02880 1626 aa16.5■□□□□ 0.23
CLU-201ENST00000316403 PRXQ9BXM0 1461 aa16.45■□□□□ 0.22
CLU-201ENST00000316403 ERICH3Q5RHP9 1530 aa16.45■□□□□ 0.22
CLU-201ENST00000316403 ERCC6Q03468 1493 aa16.43■□□□□ 0.22
CLU-201ENST00000316403 RRBP1Q9P2E9 1410 aaKnown RBP16.42■□□□□ 0.22
CLU-201ENST00000316403 ITGAEP38570 1179 aa16.42■□□□□ 0.22
CLU-201ENST00000316403 BIVM-ERCC5R4GMW8 1640 aa16.41■□□□□ 0.22
CLU-201ENST00000316403 FANCD2Q9BXW9 1451 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms