RNA–Protein interactions for RNA: ENST00000263201.5

CDC45-201, Transcript of cell division cycle 45, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC45, Length 1,976 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC45-201ENST00000263201 NISCHQ9Y2I1 1504 aa30.5■■■□□ 2.47
CDC45-201ENST00000263201 CCDC180Q9P1Z9 1646 aa26.64■■□□□ 1.85
CDC45-201ENST00000263201 ZCCHC6Q5VYS8 1495 aaKnown RBP25.58■■□□□ 1.69
CDC45-201ENST00000263201 ABCC9O60706 1549 aa25.28■■□□□ 1.64
CDC45-201ENST00000263201 DCAF8L2P0C7V8 631 aa25.23■■□□□ 1.63
CDC45-201ENST00000263201 DCAF1Q9Y4B6 1507 aa25.23■■□□□ 1.63
CDC45-201ENST00000263201 MYO15BQ96JP2 1530 aa24.97■■□□□ 1.59
CDC45-201ENST00000263201 NACADO15069 1562 aa24.85■■□□□ 1.57
CDC45-201ENST00000263201 SHROOM4Q9ULL8 1493 aa24.77■■□□□ 1.56
CDC45-201ENST00000263201 RB1CC1Q8TDY2 1594 aa24.65■■□□□ 1.54
CDC45-201ENST00000263201 SCRIBQ14160 1630 aa24.46■■□□□ 1.51
CDC45-201ENST00000263201 UNC13AQ9UPW8 1703 aa24.16■■□□□ 1.46
CDC45-201ENST00000263201 BICRAQ9NZM4 1560 aa23.92■■□□□ 1.42
CDC45-201ENST00000263201 PABPN1Q86U42 306 aaKnown RBP eCLIP23.84■■□□□ 1.41
CDC45-201ENST00000263201 SUPT5HO00267 1087 aaKnown RBP23.8■■□□□ 1.4
CDC45-201ENST00000263201 CECR2Q9BXF3 1484 aa23.71■■□□□ 1.39
CDC45-201ENST00000263201 RSF1Q96T23 1441 aaPredicted RBP23.62■■□□□ 1.37
CDC45-201ENST00000263201 MROH2BQ7Z745 1585 aa23.56■■□□□ 1.36
CDC45-201ENST00000263201 BAZ1AQ9NRL2 1556 aaPredicted RBP23.54■■□□□ 1.36
CDC45-201ENST00000263201 SMARCA4P51532 1647 aa23.46■■□□□ 1.35
CDC45-201ENST00000263201 WIZO95785 1651 aa23.36■■□□□ 1.33
CDC45-201ENST00000263201 EIF4G1Q04637 1599 aaKnown RBP23.19■■□□□ 1.3
CDC45-201ENST00000263201 PEG3Q9GZU2 1588 aa23.19■■□□□ 1.3
CDC45-201ENST00000263201 ATAD2BQ9ULI0 1458 aa23.11■■□□□ 1.29
CDC45-201ENST00000263201 TOP2AP11388 1531 aaKnown RBP23.1■■□□□ 1.29
CDC45-201ENST00000263201 SMARCA2P51531 1590 aa23.08■■□□□ 1.29
CDC45-201ENST00000263201 BAZ1BQ9UIG0 1483 aaKnown RBP22.95■■□□□ 1.26
CDC45-201ENST00000263201 NCAPD3P42695 1498 aa22.95■■□□□ 1.26
CDC45-201ENST00000263201 CCDC88BA6NC98 1476 aa22.89■■□□□ 1.25
CDC45-201ENST00000263201 CC2D2AQ9P2K1 1620 aa22.88■■□□□ 1.25
CDC45-201ENST00000263201 HMGXB3Q12766 1538 aa22.87■■□□□ 1.25
CDC45-201ENST00000263201 CHIC1Q5VXU3 224 aa22.76■■□□□ 1.23
CDC45-201ENST00000263201 DNAJC5BQ9UF47 199 aa22.44■■□□□ 1.18
CDC45-201ENST00000263201 TRIM41Q8WV44 630 aa22.4■■□□□ 1.18
CDC45-201ENST00000263201 CFTRP13569 1480 aa22.39■■□□□ 1.18
CDC45-201ENST00000263201 ABCC8Q09428 1581 aa22.34■■□□□ 1.17
CDC45-201ENST00000263201 CADPSQ9ULU8 1353 aa22.34■■□□□ 1.17
CDC45-201ENST00000263201 PRDM2Q13029 1718 aa22.26■■□□□ 1.15
CDC45-201ENST00000263201 WRNQ14191 1432 aaPredicted RBP eCLIP22.22■■□□□ 1.15
CDC45-201ENST00000263201 NESP48681 1621 aa22.17■■□□□ 1.14
CDC45-201ENST00000263201 LAMC3Q9Y6N6 1575 aa22.16■■□□□ 1.14
CDC45-201ENST00000263201 SYNJ1O43426 1573 aa22.13■■□□□ 1.13
CDC45-201ENST00000263201 FANCD2Q9BXW9 1451 aa22.08■■□□□ 1.12
CDC45-201ENST00000263201 TOP2BQ02880 1626 aa22.06■■□□□ 1.12
CDC45-201ENST00000263201 BIVM-ERCC5R4GMW8 1640 aa22.04■■□□□ 1.12
CDC45-201ENST00000263201 CUX1P39880 1505 aa22.03■■□□□ 1.12
CDC45-201ENST00000263201 PDS5BQ9NTI5 1447 aa22■■□□□ 1.11
CDC45-201ENST00000263201 FAM9AQ8IZU1 332 aaPredicted RBP21.98■■□□□ 1.11
CDC45-201ENST00000263201 CEP164Q9UPV0 1460 aa21.94■■□□□ 1.1
CDC45-201ENST00000263201 SOGA1O94964 1423 aa21.92■■□□□ 1.1
CDC45-201ENST00000263201 KIF21AQ7Z4S6 1674 aa21.9■■□□□ 1.1
CDC45-201ENST00000263201 LOC105371045A0A1W2PR82 267 aa21.89■■□□□ 1.09
CDC45-201ENST00000263201 DNMBPQ6XZF7 1577 aa21.86■■□□□ 1.09
CDC45-201ENST00000263201 RUSC2Q8N2Y8 1516 aa21.85■■□□□ 1.09
CDC45-201ENST00000263201 EEA1Q15075 1411 aa21.85■■□□□ 1.09
CDC45-201ENST00000263201 TOPBP1Q92547 1522 aa21.83■■□□□ 1.09
CDC45-201ENST00000263201 URB2Q14146 1524 aaKnown RBP21.82■■□□□ 1.08
CDC45-201ENST00000263201 FGD5Q6ZNL6 1462 aa21.8■■□□□ 1.08
CDC45-201ENST00000263201 CSRNP3Q8WYN3 585 aa21.78■■□□□ 1.08
CDC45-201ENST00000263201 POLA1P09884 1462 aaPredicted RBP21.71■■□□□ 1.07
CDC45-201ENST00000263201 MRC2Q9UBG0 1479 aa21.71■■□□□ 1.07
CDC45-201ENST00000263201 KIF27Q86VH2 1401 aa21.67■■□□□ 1.06
CDC45-201ENST00000263201 ERCC6Q03468 1493 aa21.67■■□□□ 1.06
CDC45-201ENST00000263201 RAD54L2Q9Y4B4 1467 aa21.65■■□□□ 1.06
CDC45-201ENST00000263201 EHMT2Q96KQ7 1210 aa21.65■■□□□ 1.06
CDC45-201ENST00000263201 CUX2O14529 1486 aa21.64■■□□□ 1.05
CDC45-201ENST00000263201 ABCA10Q8WWZ4 1543 aa21.61■■□□□ 1.05
CDC45-201ENST00000263201 WDR62O43379 1518 aa21.6■■□□□ 1.05
CDC45-201ENST00000263201 KIF21BO75037 1637 aa21.56■■□□□ 1.04
CDC45-201ENST00000263201 THOC2Q8NI27 1593 aaKnown RBP21.56■■□□□ 1.04
CDC45-201ENST00000263201 WDR97A6NE52 1622 aa21.54■■□□□ 1.04
CDC45-201ENST00000263201 GOLGA3Q08378 1498 aa21.53■■□□□ 1.04
CDC45-201ENST00000263201 TARBP1Q13395 1621 aaKnown RBP21.53■■□□□ 1.04
CDC45-201ENST00000263201 IGF1RP08069 1367 aa21.53■■□□□ 1.04
CDC45-201ENST00000263201 PRXQ9BXM0 1461 aa21.51■■□□□ 1.03
CDC45-201ENST00000263201 TNIKQ9UKE5 1360 aa21.47■■□□□ 1.03
CDC45-201ENST00000263201 RAPGEF2Q9Y4G8 1499 aa21.47■■□□□ 1.03
CDC45-201ENST00000263201 UBTFP17480 764 aaKnown RBP21.46■■□□□ 1.03
CDC45-201ENST00000263201 TDRD9Q8NDG6 1382 aaKnown RBP21.45■■□□□ 1.03
CDC45-201ENST00000263201 ERICH3Q5RHP9 1530 aa21.44■■□□□ 1.02
CDC45-201ENST00000263201 IFT140Q96RY7 1462 aa21.44■■□□□ 1.02
CDC45-201ENST00000263201 ABCA5Q8WWZ7 1642 aa21.44■■□□□ 1.02
CDC45-201ENST00000263201 GAPVD1Q14C86 1478 aa21.41■■□□□ 1.02
CDC45-201ENST00000263201 CARMIL1Q5VZK9 1371 aa21.4■■□□□ 1.02
CDC45-201ENST00000263201 AQRO60306 1485 aaKnown RBP eCLIP21.33■■□□□ 1.013e-10■■■■■ 55.1
CDC45-201ENST00000263201 CUL7Q14999 1698 aa21.33■■□□□ 1.01
CDC45-201ENST00000263201 ZNF608Q9ULD9 1512 aaPredicted RBP21.32■■□□□ 1
CDC45-201ENST00000263201 CEP162Q5TB80 1403 aa21.31■■□□□ 1
CDC45-201ENST00000263201 PBRM1Q86U86 1689 aa21.29■■□□□ 1
CDC45-201ENST00000263201 GRIN2BQ13224 1484 aa21.26■□□□□ 0.99
CDC45-201ENST00000263201 EIF4G3O43432 1585 aaKnown RBP21.23■□□□□ 0.99
CDC45-201ENST00000263201 CLIP1P30622 1438 aa21.19■□□□□ 0.98
CDC45-201ENST00000263201 FHAD1B1AJZ9 1412 aa21.18■□□□□ 0.98
CDC45-201ENST00000263201 ADAMTS12P58397 1594 aa21.15■□□□□ 0.98
CDC45-201ENST00000263201 RANGAP1P46060 587 aaPredicted RBP21.12■□□□□ 0.97
CDC45-201ENST00000263201 SNAPC4Q5SXM2 1469 aa21.11■□□□□ 0.97
CDC45-201ENST00000263201 MAGI1Q96QZ7 1491 aaPredicted RBP21.08■□□□□ 0.97
CDC45-201ENST00000263201 CTTNBP2Q8WZ74 1663 aa21.08■□□□□ 0.97
CDC45-201ENST00000263201 ARHGAP35Q9NRY4 1499 aa21.02■□□□□ 0.96
CDC45-201ENST00000263201 SYNJ2O15056 1496 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms