RNA–Protein interactions for RNA: ENST00000333082.7

PSMF1-202, Transcript of proteasome inhibitor subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PSMF1, Length 3,686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMF1-202ENST00000333082 NISCHQ9Y2I1 1504 aa19.74■□□□□ 0.75
PSMF1-202ENST00000333082 DCAF8L2P0C7V8 631 aa17.63■□□□□ 0.41
PSMF1-202ENST00000333082 SHROOM4Q9ULL8 1493 aa17.34■□□□□ 0.37
PSMF1-202ENST00000333082 SUPT5HO00267 1087 aaKnown RBP16.95■□□□□ 0.3
PSMF1-202ENST00000333082 CCDC180Q9P1Z9 1646 aa16.64■□□□□ 0.25
PSMF1-202ENST00000333082 ZCCHC6Q5VYS8 1495 aaKnown RBP16.52■□□□□ 0.24
PSMF1-202ENST00000333082 ABCC9O60706 1549 aa16.48■□□□□ 0.23
PSMF1-202ENST00000333082 SCRIBQ14160 1630 aa16.04■□□□□ 0.16
PSMF1-202ENST00000333082 PABPN1Q86U42 306 aaKnown RBP eCLIP15.93■□□□□ 0.14
PSMF1-202ENST00000333082 EHMT2Q96KQ7 1210 aa15.92■□□□□ 0.14
PSMF1-202ENST00000333082 DCAF1Q9Y4B6 1507 aa15.89■□□□□ 0.13
PSMF1-202ENST00000333082 CHIC1Q5VXU3 224 aa15.86■□□□□ 0.13
PSMF1-202ENST00000333082 FAM9AQ8IZU1 332 aaPredicted RBP15.8■□□□□ 0.12
PSMF1-202ENST00000333082 NACADO15069 1562 aa15.7■□□□□ 0.1
PSMF1-202ENST00000333082 TRIM41Q8WV44 630 aa15.68■□□□□ 0.1
PSMF1-202ENST00000333082 RB1CC1Q8TDY2 1594 aa15.64■□□□□ 0.09
PSMF1-202ENST00000333082 LOC105371045A0A1W2PR82 267 aa15.62■□□□□ 0.09
PSMF1-202ENST00000333082 RSF1Q96T23 1441 aaPredicted RBP15.6■□□□□ 0.09
PSMF1-202ENST00000333082 CECR2Q9BXF3 1484 aa15.6■□□□□ 0.09
PSMF1-202ENST00000333082 MYO15BQ96JP2 1530 aa15.52■□□□□ 0.08
PSMF1-202ENST00000333082 MROH2BQ7Z745 1585 aa15.41■□□□□ 0.06
PSMF1-202ENST00000333082 PCGF6Q9BYE7 350 aa15.36■□□□□ 0.05
PSMF1-202ENST00000333082 WIZO95785 1651 aa15.27■□□□□ 0.04
PSMF1-202ENST00000333082 TTBK1Q5TCY1 1321 aaPredicted RBP15.26■□□□□ 0.03
PSMF1-202ENST00000333082 PPARGC1BQ86YN6 1023 aaKnown RBP15.24■□□□□ 0.03
PSMF1-202ENST00000333082 RANGAP1P46060 587 aaPredicted RBP15.24■□□□□ 0.03
PSMF1-202ENST00000333082 BAZ1AQ9NRL2 1556 aaPredicted RBP15.23■□□□□ 0.03
PSMF1-202ENST00000333082 UBTFP17480 764 aaKnown RBP15.15■□□□□ 0.02
PSMF1-202ENST00000333082 SMARCA4P51532 1647 aa15.06■□□□□ 0
PSMF1-202ENST00000333082 CCDC88BA6NC98 1476 aa15.05■□□□□ -0
PSMF1-202ENST00000333082 UNC13AQ9UPW8 1703 aa15.04■□□□□ -0
PSMF1-202ENST00000333082 BICRAQ9NZM4 1560 aa15.01□□□□□ -0.01
PSMF1-202ENST00000333082 BAZ1BQ9UIG0 1483 aaKnown RBP14.99□□□□□ -0.01
PSMF1-202ENST00000333082 ABCC8Q09428 1581 aa14.97□□□□□ -0.01
PSMF1-202ENST00000333082 TOP2AP11388 1531 aaKnown RBP14.95□□□□□ -0.02
PSMF1-202ENST00000333082 ATAD2BQ9ULI0 1458 aa14.9□□□□□ -0.02
PSMF1-202ENST00000333082 TRIM26Q12899 539 aaPredicted RBP14.89□□□□□ -0.03
PSMF1-202ENST00000333082 CSRNP3Q8WYN3 585 aa14.89□□□□□ -0.03
PSMF1-202ENST00000333082 SMARCA2P51531 1590 aa14.84□□□□□ -0.03
PSMF1-202ENST00000333082 SOGA1O94964 1423 aa14.83□□□□□ -0.04
PSMF1-202ENST00000333082 WRNQ14191 1432 aaPredicted RBP eCLIP14.82□□□□□ -0.04
PSMF1-202ENST00000333082 APLP2Q06481 763 aa14.81□□□□□ -0.04
PSMF1-202ENST00000333082 HRCP23327 699 aa14.76□□□□□ -0.05
PSMF1-202ENST00000333082 ATP1B4Q9UN42 357 aaPredicted RBP14.73□□□□□ -0.05
PSMF1-202ENST00000333082 EIF4G1Q04637 1599 aaKnown RBP14.73□□□□□ -0.05
PSMF1-202ENST00000333082 RUSC2Q8N2Y8 1516 aa14.71□□□□□ -0.05
PSMF1-202ENST00000333082 CCER1Q8TC90 406 aaPredicted RBP14.63□□□□□ -0.07
PSMF1-202ENST00000333082 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.61□□□□□ -0.07
PSMF1-202ENST00000333082 NCAPD3P42695 1498 aa14.6□□□□□ -0.07
PSMF1-202ENST00000333082 HNRNPUL2Q1KMD3 747 aaKnown RBP14.6□□□□□ -0.07
PSMF1-202ENST00000333082 DNAJC5BQ9UF47 199 aa14.59□□□□□ -0.07
PSMF1-202ENST00000333082 CEP162Q5TB80 1403 aa14.59□□□□□ -0.07
PSMF1-202ENST00000333082 P3H3Q8IVL6 736 aa14.57□□□□□ -0.08
PSMF1-202ENST00000333082 PEG3Q9GZU2 1588 aa14.53□□□□□ -0.08
PSMF1-202ENST00000333082 ITGAEP38570 1179 aa14.52□□□□□ -0.09
PSMF1-202ENST00000333082 EEA1Q15075 1411 aa14.52□□□□□ -0.09
PSMF1-202ENST00000333082 GOLGA3Q08378 1498 aa14.52□□□□□ -0.09
PSMF1-202ENST00000333082 SYNJ1O43426 1573 aa14.51□□□□□ -0.09
PSMF1-202ENST00000333082 CADPSQ9ULU8 1353 aa14.51□□□□□ -0.09
PSMF1-202ENST00000333082 TNIKQ9UKE5 1360 aa14.5□□□□□ -0.09
PSMF1-202ENST00000333082 CC2D2AQ9P2K1 1620 aa14.5□□□□□ -0.09
PSMF1-202ENST00000333082 PELP1Q8IZL8 1130 aaKnown RBP14.49□□□□□ -0.09
PSMF1-202ENST00000333082 CLIP1P30622 1438 aa14.47□□□□□ -0.09
PSMF1-202ENST00000333082 CEP164Q9UPV0 1460 aa14.45□□□□□ -0.1
PSMF1-202ENST00000333082 KIF27Q86VH2 1401 aa14.44□□□□□ -0.1
PSMF1-202ENST00000333082 RAPGEF2Q9Y4G8 1499 aa14.43□□□□□ -0.1
PSMF1-202ENST00000333082 HMGXB3Q12766 1538 aa14.43□□□□□ -0.1
PSMF1-202ENST00000333082 CUX2O14529 1486 aa14.43□□□□□ -0.1
PSMF1-202ENST00000333082 NESP48681 1621 aa14.42□□□□□ -0.1
PSMF1-202ENST00000333082 ZEB1P37275 1124 aaPredicted RBP14.4□□□□□ -0.1
PSMF1-202ENST00000333082 CFTRP13569 1480 aa14.4□□□□□ -0.11
PSMF1-202ENST00000333082 FBLN2P98095 1184 aa14.37□□□□□ -0.11
PSMF1-202ENST00000333082 ARID3CA6NKF2 412 aa14.36□□□□□ -0.11
PSMF1-202ENST00000333082 FANCD2Q9BXW9 1451 aa14.36□□□□□ -0.11
PSMF1-202ENST00000333082 CUX1P39880 1505 aa14.34□□□□□ -0.11
PSMF1-202ENST00000333082 TDRD9Q8NDG6 1382 aaKnown RBP14.33□□□□□ -0.12
PSMF1-202ENST00000333082 CARMIL1Q5VZK9 1371 aa14.3□□□□□ -0.12
PSMF1-202ENST00000333082 FGD5Q6ZNL6 1462 aa14.29□□□□□ -0.12
PSMF1-202ENST00000333082 RAD54L2Q9Y4B4 1467 aa14.29□□□□□ -0.12
PSMF1-202ENST00000333082 TOP2BQ02880 1626 aa14.28□□□□□ -0.12
PSMF1-202ENST00000333082 FAM50AQ14320 339 aaKnown RBP14.27□□□□□ -0.13
PSMF1-202ENST00000333082 PDS5BQ9NTI5 1447 aa14.23□□□□□ -0.13
PSMF1-202ENST00000333082 KANK4Q5T7N3 995 aaPredicted RBP14.23□□□□□ -0.13
PSMF1-202ENST00000333082 IGF1RP08069 1367 aa14.23□□□□□ -0.13
PSMF1-202ENST00000333082 VPS8Q8N3P4 1428 aa14.2□□□□□ -0.14
PSMF1-202ENST00000333082 ERCC6Q03468 1493 aa14.17□□□□□ -0.14
PSMF1-202ENST00000333082 KIF21BO75037 1637 aa14.13□□□□□ -0.15
PSMF1-202ENST00000333082 PRXQ9BXM0 1461 aa14.13□□□□□ -0.15
PSMF1-202ENST00000333082 TOPBP1Q92547 1522 aa14.12□□□□□ -0.15
PSMF1-202ENST00000333082 POLA1P09884 1462 aaPredicted RBP14.12□□□□□ -0.15
PSMF1-202ENST00000333082 CHMP7Q8WUX9 453 aaPredicted RBP14.1□□□□□ -0.15
PSMF1-202ENST00000333082 BIVM-ERCC5R4GMW8 1640 aa14.1□□□□□ -0.15
PSMF1-202ENST00000333082 MYT1Q01538 1121 aa14.08□□□□□ -0.16
PSMF1-202ENST00000333082 FHOD3Q2V2M9 1422 aa14.07□□□□□ -0.16
PSMF1-202ENST00000333082 ARAP1Q96P48 1450 aa14.07□□□□□ -0.16
PSMF1-202ENST00000333082 AQRO60306 1485 aaKnown RBP eCLIP14.06□□□□□ -0.161e-6■■■■■ 27.8
PSMF1-202ENST00000333082 URB2Q14146 1524 aaKnown RBP14.03□□□□□ -0.16
PSMF1-202ENST00000333082 GAPVD1Q14C86 1478 aa14.02□□□□□ -0.16
PSMF1-202ENST00000333082 NEUROD1Q13562 356 aa14.02□□□□□ -0.17
PSMF1-202ENST00000333082 DNMBPQ6XZF7 1577 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms