RNA–Protein interactions for RNA: ENST00000522299.5

CLU-211, Transcript of clusterin, humanhuman

TSL 2

Gene CLU, Length 2,807 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLU-211ENST00000522299 NISCHQ9Y2I1 1504 aa23.28■■□□□ 1.32
CLU-211ENST00000522299 DCAF8L2P0C7V8 631 aa20.5■□□□□ 0.87
CLU-211ENST00000522299 ABCC9O60706 1549 aa19.95■□□□□ 0.78
CLU-211ENST00000522299 CCDC180Q9P1Z9 1646 aa19.94■□□□□ 0.78
CLU-211ENST00000522299 SHROOM4Q9ULL8 1493 aa19.94■□□□□ 0.78
CLU-211ENST00000522299 ZCCHC6Q5VYS8 1495 aaKnown RBP19.43■□□□□ 0.7
CLU-211ENST00000522299 SUPT5HO00267 1087 aaKnown RBP19.13■□□□□ 0.65
CLU-211ENST00000522299 PABPN1Q86U42 306 aaKnown RBP eCLIP19.12■□□□□ 0.65
CLU-211ENST00000522299 SCRIBQ14160 1630 aa19.03■□□□□ 0.64
CLU-211ENST00000522299 MYO15BQ96JP2 1530 aa18.81■□□□□ 0.6
CLU-211ENST00000522299 DCAF1Q9Y4B6 1507 aa18.75■□□□□ 0.59
CLU-211ENST00000522299 NACADO15069 1562 aa18.74■□□□□ 0.59
CLU-211ENST00000522299 RB1CC1Q8TDY2 1594 aa18.73■□□□□ 0.59
CLU-211ENST00000522299 CECR2Q9BXF3 1484 aa18.5■□□□□ 0.55
CLU-211ENST00000522299 UNC13AQ9UPW8 1703 aa18.42■□□□□ 0.54
CLU-211ENST00000522299 BICRAQ9NZM4 1560 aa18.3■□□□□ 0.52
CLU-211ENST00000522299 MROH2BQ7Z745 1585 aa18.22■□□□□ 0.51
CLU-211ENST00000522299 RSF1Q96T23 1441 aaPredicted RBP18.22■□□□□ 0.51
CLU-211ENST00000522299 HRCP23327 699 aa18.15■□□□□ 0.5
CLU-211ENST00000522299 DNAJC5BQ9UF47 199 aa18.09■□□□□ 0.49
CLU-211ENST00000522299 WIZO95785 1651 aa18.07■□□□□ 0.48
CLU-211ENST00000522299 PELP1Q8IZL8 1130 aaKnown RBP18.05■□□□□ 0.48
CLU-211ENST00000522299 EHMT2Q96KQ7 1210 aa18.02■□□□□ 0.47
CLU-211ENST00000522299 BAZ1AQ9NRL2 1556 aaPredicted RBP17.89■□□□□ 0.45
CLU-211ENST00000522299 SMARCA4P51532 1647 aa17.88■□□□□ 0.45
CLU-211ENST00000522299 FAM9AQ8IZU1 332 aaPredicted RBP17.84■□□□□ 0.45
CLU-211ENST00000522299 EIF4G1Q04637 1599 aaKnown RBP17.82■□□□□ 0.44
CLU-211ENST00000522299 CHIC1Q5VXU3 224 aa17.8■□□□□ 0.44
CLU-211ENST00000522299 ATAD2BQ9ULI0 1458 aa17.76■□□□□ 0.43
CLU-211ENST00000522299 BAZ1BQ9UIG0 1483 aaKnown RBP17.7■□□□□ 0.42
CLU-211ENST00000522299 CC2D2AQ9P2K1 1620 aa17.68■□□□□ 0.42
CLU-211ENST00000522299 CCDC88BA6NC98 1476 aa17.67■□□□□ 0.42
CLU-211ENST00000522299 TRIM41Q8WV44 630 aa17.66■□□□□ 0.42
CLU-211ENST00000522299 MYT1Q01538 1121 aa17.63■□□□□ 0.41
CLU-211ENST00000522299 LOC105371045A0A1W2PR82 267 aa17.57■□□□□ 0.4
CLU-211ENST00000522299 PCGF6Q9BYE7 350 aa17.55■□□□□ 0.4
CLU-211ENST00000522299 TOP2AP11388 1531 aaKnown RBP17.54■□□□□ 0.4
CLU-211ENST00000522299 SMARCA2P51531 1590 aa17.5■□□□□ 0.39
CLU-211ENST00000522299 ABCC8Q09428 1581 aa17.48■□□□□ 0.39
CLU-211ENST00000522299 PPARGC1BQ86YN6 1023 aaKnown RBP17.46■□□□□ 0.39
CLU-211ENST00000522299 NCAPD3P42695 1498 aa17.45■□□□□ 0.38
CLU-211ENST00000522299 NESP48681 1621 aa17.45■□□□□ 0.38
CLU-211ENST00000522299 RANGAP1P46060 587 aaPredicted RBP17.39■□□□□ 0.37
CLU-211ENST00000522299 PEG3Q9GZU2 1588 aa17.35■□□□□ 0.37
CLU-211ENST00000522299 HMGXB3Q12766 1538 aa17.24■□□□□ 0.35
CLU-211ENST00000522299 ZEB1P37275 1124 aaPredicted RBP17.23■□□□□ 0.35
CLU-211ENST00000522299 TRIM26Q12899 539 aaPredicted RBP17.23■□□□□ 0.35
CLU-211ENST00000522299 CADPSQ9ULU8 1353 aa17.22■□□□□ 0.35
CLU-211ENST00000522299 RUSC2Q8N2Y8 1516 aa17.18■□□□□ 0.34
CLU-211ENST00000522299 SOGA1O94964 1423 aa17.17■□□□□ 0.34
CLU-211ENST00000522299 WRNQ14191 1432 aaPredicted RBP eCLIP17.16■□□□□ 0.34
CLU-211ENST00000522299 CFTRP13569 1480 aa17.11■□□□□ 0.33
CLU-211ENST00000522299 TTBK1Q5TCY1 1321 aaPredicted RBP17.1■□□□□ 0.33
CLU-211ENST00000522299 FANCD2Q9BXW9 1451 aa17.07■□□□□ 0.32
CLU-211ENST00000522299 SYNJ1O43426 1573 aa17.06■□□□□ 0.32
CLU-211ENST00000522299 UBTFP17480 764 aaKnown RBP17.06■□□□□ 0.32
CLU-211ENST00000522299 SCAF1Q9H7N4 1312 aaKnown RBP17.05■□□□□ 0.32
CLU-211ENST00000522299 ERCC6Q03468 1493 aa17■□□□□ 0.31
CLU-211ENST00000522299 RAD54L2Q9Y4B4 1467 aa16.98■□□□□ 0.31
CLU-211ENST00000522299 CUX1P39880 1505 aa16.97■□□□□ 0.31
CLU-211ENST00000522299 CSRNP3Q8WYN3 585 aa16.95■□□□□ 0.3
CLU-211ENST00000522299 TDRD9Q8NDG6 1382 aaKnown RBP16.95■□□□□ 0.3
CLU-211ENST00000522299 FBLN2P98095 1184 aa16.91■□□□□ 0.3
CLU-211ENST00000522299 CEP164Q9UPV0 1460 aa16.9■□□□□ 0.3
CLU-211ENST00000522299 PDS5BQ9NTI5 1447 aa16.9■□□□□ 0.3
CLU-211ENST00000522299 KIF21AQ7Z4S6 1674 aa16.86■□□□□ 0.29
CLU-211ENST00000522299 FGD5Q6ZNL6 1462 aa16.86■□□□□ 0.29
CLU-211ENST00000522299 URB2Q14146 1524 aaKnown RBP16.86■□□□□ 0.29
CLU-211ENST00000522299 P3H3Q8IVL6 736 aa16.84■□□□□ 0.29
CLU-211ENST00000522299 CUX2O14529 1486 aa16.83■□□□□ 0.29
CLU-211ENST00000522299 TOPBP1Q92547 1522 aa16.8■□□□□ 0.28
CLU-211ENST00000522299 LAMC3Q9Y6N6 1575 aa16.79■□□□□ 0.28
CLU-211ENST00000522299 AQRO60306 1485 aaKnown RBP eCLIP16.78■□□□□ 0.281e-9■■■□□ 16.1
CLU-211ENST00000522299 POLA1P09884 1462 aaPredicted RBP16.77■□□□□ 0.28
CLU-211ENST00000522299 TOP2BQ02880 1626 aa16.75■□□□□ 0.27
CLU-211ENST00000522299 ACIN1Q9UKV3 1341 aaKnown RBP16.73■□□□□ 0.27
CLU-211ENST00000522299 ATP1B4Q9UN42 357 aaPredicted RBP16.73■□□□□ 0.27
CLU-211ENST00000522299 ZNF608Q9ULD9 1512 aaPredicted RBP16.71■□□□□ 0.27
CLU-211ENST00000522299 RAPGEF2Q9Y4G8 1499 aa16.71■□□□□ 0.27
CLU-211ENST00000522299 ARID3CA6NKF2 412 aa16.7■□□□□ 0.26
CLU-211ENST00000522299 KIF27Q86VH2 1401 aa16.67■□□□□ 0.26
CLU-211ENST00000522299 IGF1RP08069 1367 aa16.66■□□□□ 0.26
CLU-211ENST00000522299 MRC2Q9UBG0 1479 aa16.64■□□□□ 0.25
CLU-211ENST00000522299 DNMBPQ6XZF7 1577 aa16.62■□□□□ 0.25
CLU-211ENST00000522299 CARMIL1Q5VZK9 1371 aa16.6■□□□□ 0.25
CLU-211ENST00000522299 BIVM-ERCC5R4GMW8 1640 aa16.6■□□□□ 0.25
CLU-211ENST00000522299 PRDM2Q13029 1718 aa16.57■□□□□ 0.24
CLU-211ENST00000522299 NEUROD1Q13562 356 aa16.57■□□□□ 0.24
CLU-211ENST00000522299 CHMP7Q8WUX9 453 aaPredicted RBP16.56■□□□□ 0.24
CLU-211ENST00000522299 CENPBP07199 599 aaPredicted RBP16.55■□□□□ 0.24
CLU-211ENST00000522299 GAPVD1Q14C86 1478 aa16.54■□□□□ 0.24
CLU-211ENST00000522299 CEP162Q5TB80 1403 aa16.52■□□□□ 0.24
CLU-211ENST00000522299 GOLGA3Q08378 1498 aa16.49■□□□□ 0.23
CLU-211ENST00000522299 GTF3C3Q9Y5Q9 886 aa16.47■□□□□ 0.23
CLU-211ENST00000522299 ABCA10Q8WWZ4 1543 aa16.46■□□□□ 0.23
CLU-211ENST00000522299 THOC2Q8NI27 1593 aaKnown RBP16.44■□□□□ 0.22
CLU-211ENST00000522299 EEA1Q15075 1411 aa16.44■□□□□ 0.22
CLU-211ENST00000522299 WDR62O43379 1518 aa16.42■□□□□ 0.22
CLU-211ENST00000522299 PRXQ9BXM0 1461 aa16.42■□□□□ 0.22
CLU-211ENST00000522299 CLIP1P30622 1438 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms