Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
RPS4Y2Q8TD47 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RPS4Y2Q8TD47 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RPS4Y2Q8TD47 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RPS4Y2Q8TD47 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
RPS4Y2Q8TD47 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
RPS4Y2Q8TD47 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RPS4Y2Q8TD47 GLI3-203ENST00000437480 451 ntTSL 2 BASIC17.29■□□□□ 0.36
RPS4Y2Q8TD47 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC17.29■□□□□ 0.36
RPS4Y2Q8TD47 PLLP-204ENST00000569059 665 ntTSL 3 BASIC17.29■□□□□ 0.36
RPS4Y2Q8TD47 AC105020.6-201ENST00000621523 1217 ntBASIC17.29■□□□□ 0.36
RPS4Y2Q8TD47 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RPS4Y2Q8TD47 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
RPS4Y2Q8TD47 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RPS4Y2Q8TD47 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RPS4Y2Q8TD47 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RPS4Y2Q8TD47 CROCCP3-202ENST00000420820 1947 ntBASIC17.29■□□□□ 0.36
RPS4Y2Q8TD47 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RPS4Y2Q8TD47 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RPS4Y2Q8TD47 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RPS4Y2Q8TD47 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
RPS4Y2Q8TD47 PHGDH-210ENST00000641115 1638 ntBASIC17.29■□□□□ 0.36
RPS4Y2Q8TD47 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPS4Y2Q8TD47 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
RPS4Y2Q8TD47 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RPS4Y2Q8TD47 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPS4Y2Q8TD47 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC17.28■□□□□ 0.36
RPS4Y2Q8TD47 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
RPS4Y2Q8TD47 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RPS4Y2Q8TD47 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.28■□□□□ 0.36
RPS4Y2Q8TD47 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPS4Y2Q8TD47 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPS4Y2Q8TD47 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPS4Y2Q8TD47 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RPS4Y2Q8TD47 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC17.28■□□□□ 0.36
RPS4Y2Q8TD47 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC17.28■□□□□ 0.36
RPS4Y2Q8TD47 BRI3-207ENST00000539286 699 ntTSL 2 BASIC17.28■□□□□ 0.36
RPS4Y2Q8TD47 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RPS4Y2Q8TD47 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC17.28■□□□□ 0.36
RPS4Y2Q8TD47 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPS4Y2Q8TD47 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
RPS4Y2Q8TD47 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPS4Y2Q8TD47 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPS4Y2Q8TD47 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPS4Y2Q8TD47 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RPS4Y2Q8TD47 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
RPS4Y2Q8TD47 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RPS4Y2Q8TD47 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
RPS4Y2Q8TD47 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
RPS4Y2Q8TD47 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.27■□□□□ 0.36
RPS4Y2Q8TD47 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RPS4Y2Q8TD47 KRT18P5-201ENST00000436075 1291 ntBASIC17.27■□□□□ 0.36
RPS4Y2Q8TD47 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.27■□□□□ 0.36
RPS4Y2Q8TD47 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC17.27■□□□□ 0.36
RPS4Y2Q8TD47 NTF6G-201ENST00000591094 616 ntBASIC17.27■□□□□ 0.36
RPS4Y2Q8TD47 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
RPS4Y2Q8TD47 AC013268.1-206ENST00000638368 961 ntBASIC17.27■□□□□ 0.36
RPS4Y2Q8TD47 AC112229.1-201ENST00000639295 961 ntBASIC17.27■□□□□ 0.36
RPS4Y2Q8TD47 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
RPS4Y2Q8TD47 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RPS4Y2Q8TD47 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RPS4Y2Q8TD47 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RPS4Y2Q8TD47 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RPS4Y2Q8TD47 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RPS4Y2Q8TD47 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
RPS4Y2Q8TD47 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RPS4Y2Q8TD47 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RPS4Y2Q8TD47 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.27■□□□□ 0.35
RPS4Y2Q8TD47 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RPS4Y2Q8TD47 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RPS4Y2Q8TD47 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RPS4Y2Q8TD47 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RPS4Y2Q8TD47 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RPS4Y2Q8TD47 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RPS4Y2Q8TD47 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RPS4Y2Q8TD47 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RPS4Y2Q8TD47 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RPS4Y2Q8TD47 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RPS4Y2Q8TD47 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RPS4Y2Q8TD47 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RPS4Y2Q8TD47 GXYLT1P2-201ENST00000433312 1230 ntBASIC17.26■□□□□ 0.35
RPS4Y2Q8TD47 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC17.26■□□□□ 0.35
RPS4Y2Q8TD47 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC17.26■□□□□ 0.35
RPS4Y2Q8TD47 AC092666.2-201ENST00000613287 246 ntBASIC17.26■□□□□ 0.35
RPS4Y2Q8TD47 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
RPS4Y2Q8TD47 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RPS4Y2Q8TD47 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
RPS4Y2Q8TD47 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.26■□□□□ 0.35
RPS4Y2Q8TD47 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
RPS4Y2Q8TD47 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RPS4Y2Q8TD47 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.26■□□□□ 0.35
RPS4Y2Q8TD47 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RPS4Y2Q8TD47 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RPS4Y2Q8TD47 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RPS4Y2Q8TD47 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RPS4Y2Q8TD47 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RPS4Y2Q8TD47 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RPS4Y2Q8TD47 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RPS4Y2Q8TD47 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RPS4Y2Q8TD47 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms