Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 CYP2T3P-201ENST00000601990 817 ntBASIC20.83■□□□□ 0.93
CTNNA1P35221 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CTNNA1P35221 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CTNNA1P35221 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CTNNA1P35221 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CTNNA1P35221 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.82■□□□□ 0.92
CTNNA1P35221 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CTNNA1P35221 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.82■□□□□ 0.92
CTNNA1P35221 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.82■□□□□ 0.92
CTNNA1P35221 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.82■□□□□ 0.92
CTNNA1P35221 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CTNNA1P35221 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CTNNA1P35221 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CTNNA1P35221 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.82■□□□□ 0.92
CTNNA1P35221 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
CTNNA1P35221 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CTNNA1P35221 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CTNNA1P35221 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.82■□□□□ 0.92
CTNNA1P35221 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CTNNA1P35221 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.82■□□□□ 0.92
CTNNA1P35221 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CTNNA1P35221 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.82■□□□□ 0.92
CTNNA1P35221 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
CTNNA1P35221 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CTNNA1P35221 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CTNNA1P35221 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.82■□□□□ 0.92
CTNNA1P35221 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CTNNA1P35221 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CTNNA1P35221 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CTNNA1P35221 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.82■□□□□ 0.92
CTNNA1P35221 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTNNA1P35221 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTNNA1P35221 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTNNA1P35221 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTNNA1P35221 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CTNNA1P35221 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTNNA1P35221 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTNNA1P35221 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
CTNNA1P35221 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTNNA1P35221 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTNNA1P35221 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTNNA1P35221 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC20.81■□□□□ 0.92
CTNNA1P35221 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTNNA1P35221 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
CTNNA1P35221 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CTNNA1P35221 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTNNA1P35221 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTNNA1P35221 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.81■□□□□ 0.92
CTNNA1P35221 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.81■□□□□ 0.92
CTNNA1P35221 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CTNNA1P35221 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
CTNNA1P35221 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTNNA1P35221 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTNNA1P35221 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.81■□□□□ 0.92
CTNNA1P35221 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTNNA1P35221 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTNNA1P35221 AP001271.2-201ENST00000624018 1556 ntBASIC20.8■□□□□ 0.92
CTNNA1P35221 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.8■□□□□ 0.92
CTNNA1P35221 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CTNNA1P35221 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CTNNA1P35221 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CTNNA1P35221 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.8■□□□□ 0.92
CTNNA1P35221 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.8■□□□□ 0.92
CTNNA1P35221 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.8■□□□□ 0.92
CTNNA1P35221 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CTNNA1P35221 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CTNNA1P35221 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CTNNA1P35221 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CTNNA1P35221 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.8■□□□□ 0.92
CTNNA1P35221 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.8■□□□□ 0.92
CTNNA1P35221 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.8■□□□□ 0.92
CTNNA1P35221 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.8■□□□□ 0.92
CTNNA1P35221 AC069236.1-201ENST00000604339 616 ntBASIC20.8■□□□□ 0.92
CTNNA1P35221 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CTNNA1P35221 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.8■□□□□ 0.92
CTNNA1P35221 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.8■□□□□ 0.92
CTNNA1P35221 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.8■□□□□ 0.92
CTNNA1P35221 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CTNNA1P35221 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CTNNA1P35221 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CTNNA1P35221 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.8■□□□□ 0.92
CTNNA1P35221 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CTNNA1P35221 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CTNNA1P35221 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
CTNNA1P35221 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CTNNA1P35221 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CTNNA1P35221 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.79■□□□□ 0.92
CTNNA1P35221 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CTNNA1P35221 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CTNNA1P35221 AC026271.2-201ENST00000428091 497 ntBASIC20.79■□□□□ 0.92
CTNNA1P35221 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CTNNA1P35221 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.79■□□□□ 0.92
CTNNA1P35221 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.79■□□□□ 0.92
CTNNA1P35221 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.79■□□□□ 0.92
CTNNA1P35221 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CTNNA1P35221 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CTNNA1P35221 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CTNNA1P35221 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
CTNNA1P35221 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
CTNNA1P35221 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms