RNA–Protein interactions for RNA: ENST00000415738.2

PRDM8-202, Transcript of PR/SET domain 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM8, Length 3,124 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM8-202ENST00000415738 NISCHQ9Y2I1 1504 aa40.35■■■■■ 4.05
PRDM8-202ENST00000415738 CCDC180Q9P1Z9 1646 aa34.66■■■■□ 3.14
PRDM8-202ENST00000415738 ZCCHC6Q5VYS8 1495 aaKnown RBP34■■■■□ 3.03
PRDM8-202ENST00000415738 SHROOM4Q9ULL8 1493 aa33.86■■■■□ 3.01
PRDM8-202ENST00000415738 DCAF8L2P0C7V8 631 aa33.65■■■□□ 2.98
PRDM8-202ENST00000415738 DCAF1Q9Y4B6 1507 aa33.14■■■□□ 2.9
PRDM8-202ENST00000415738 SUPT5HO00267 1087 aaKnown RBP32.9■■■□□ 2.86
PRDM8-202ENST00000415738 ABCC9O60706 1549 aa32.66■■■□□ 2.82
PRDM8-202ENST00000415738 MYO15BQ96JP2 1530 aa32.45■■■□□ 2.78
PRDM8-202ENST00000415738 SCRIBQ14160 1630 aa32.34■■■□□ 2.77
PRDM8-202ENST00000415738 HRCP23327 699 aa32.27■■■□□ 2.76
PRDM8-202ENST00000415738 NACADO15069 1562 aa32.22■■■□□ 2.75
PRDM8-202ENST00000415738 PELP1Q8IZL8 1130 aaKnown RBP31.99■■■□□ 2.71
PRDM8-202ENST00000415738 RB1CC1Q8TDY2 1594 aa31.84■■■□□ 2.69
PRDM8-202ENST00000415738 PPARGC1BQ86YN6 1023 aaKnown RBP31.84■■■□□ 2.69
PRDM8-202ENST00000415738 RSF1Q96T23 1441 aaPredicted RBP31.65■■■□□ 2.66
PRDM8-202ENST00000415738 CHIC1Q5VXU3 224 aa31.65■■■□□ 2.66
PRDM8-202ENST00000415738 CECR2Q9BXF3 1484 aa31.49■■■□□ 2.63
PRDM8-202ENST00000415738 PCGF6Q9BYE7 350 aa31.44■■■□□ 2.62
PRDM8-202ENST00000415738 MROH2BQ7Z745 1585 aa31.32■■■□□ 2.6
PRDM8-202ENST00000415738 UNC13AQ9UPW8 1703 aa31.27■■■□□ 2.6
PRDM8-202ENST00000415738 WIZO95785 1651 aa31.1■■■□□ 2.57
PRDM8-202ENST00000415738 PABPN1Q86U42 306 aaKnown RBP eCLIP31.08■■■□□ 2.57
PRDM8-202ENST00000415738 BAZ1AQ9NRL2 1556 aaPredicted RBP31.07■■■□□ 2.56
PRDM8-202ENST00000415738 SCAF1Q9H7N4 1312 aaKnown RBP31.04■■■□□ 2.56
PRDM8-202ENST00000415738 BICRAQ9NZM4 1560 aa30.94■■■□□ 2.54
PRDM8-202ENST00000415738 SMARCA4P51532 1647 aa30.88■■■□□ 2.53
PRDM8-202ENST00000415738 MYT1Q01538 1121 aa30.86■■■□□ 2.53
PRDM8-202ENST00000415738 TRIM41Q8WV44 630 aa30.73■■■□□ 2.51
PRDM8-202ENST00000415738 LOC105371045A0A1W2PR82 267 aa30.66■■■□□ 2.5
PRDM8-202ENST00000415738 TOP2AP11388 1531 aaKnown RBP30.65■■■□□ 2.5
PRDM8-202ENST00000415738 CCDC88BA6NC98 1476 aa30.49■■■□□ 2.47
PRDM8-202ENST00000415738 SMARCA2P51531 1590 aa30.44■■■□□ 2.46
PRDM8-202ENST00000415738 FAM9AQ8IZU1 332 aaPredicted RBP30.42■■■□□ 2.46
PRDM8-202ENST00000415738 EIF4G1Q04637 1599 aaKnown RBP30.37■■■□□ 2.45
PRDM8-202ENST00000415738 PEG3Q9GZU2 1588 aa30.32■■■□□ 2.44
PRDM8-202ENST00000415738 ATAD2BQ9ULI0 1458 aa30.26■■■□□ 2.43
PRDM8-202ENST00000415738 EHMT2Q96KQ7 1210 aa30.16■■■□□ 2.42
PRDM8-202ENST00000415738 ABCC8Q09428 1581 aa30.16■■■□□ 2.42
PRDM8-202ENST00000415738 BAZ1BQ9UIG0 1483 aaKnown RBP30.15■■■□□ 2.42
PRDM8-202ENST00000415738 TRIM26Q12899 539 aaPredicted RBP30.02■■■□□ 2.4
PRDM8-202ENST00000415738 ACIN1Q9UKV3 1341 aaKnown RBP29.96■■■□□ 2.39
PRDM8-202ENST00000415738 NEUROD1Q13562 356 aa29.95■■■□□ 2.39
PRDM8-202ENST00000415738 ZEB1P37275 1124 aaPredicted RBP29.88■■■□□ 2.37
PRDM8-202ENST00000415738 GTF3C3Q9Y5Q9 886 aa29.86■■■□□ 2.37
PRDM8-202ENST00000415738 NCAPD3P42695 1498 aa29.8■■■□□ 2.36
PRDM8-202ENST00000415738 WRNQ14191 1432 aaPredicted RBP eCLIP29.78■■■□□ 2.36
PRDM8-202ENST00000415738 SOGA1O94964 1423 aa29.74■■■□□ 2.35
PRDM8-202ENST00000415738 HMGXB3Q12766 1538 aa29.74■■■□□ 2.35
PRDM8-202ENST00000415738 SYNJ1O43426 1573 aa29.63■■■□□ 2.33
PRDM8-202ENST00000415738 RUSC2Q8N2Y8 1516 aa29.62■■■□□ 2.33
PRDM8-202ENST00000415738 CSRNP3Q8WYN3 585 aa29.55■■■□□ 2.32
PRDM8-202ENST00000415738 EEA1Q15075 1411 aa29.54■■■□□ 2.32
PRDM8-202ENST00000415738 CENPBP07199 599 aaPredicted RBP29.42■■■□□ 2.3
PRDM8-202ENST00000415738 CC2D2AQ9P2K1 1620 aa29.4■■■□□ 2.3
PRDM8-202ENST00000415738 UBTFP17480 764 aaKnown RBP29.38■■■□□ 2.29
PRDM8-202ENST00000415738 CFTRP13569 1480 aa29.36■■■□□ 2.29
PRDM8-202ENST00000415738 TOP2BQ02880 1626 aa29.34■■■□□ 2.29
PRDM8-202ENST00000415738 TNIKQ9UKE5 1360 aa29.32■■■□□ 2.28
PRDM8-202ENST00000415738 CEP162Q5TB80 1403 aa29.3■■■□□ 2.28
PRDM8-202ENST00000415738 GOLGA3Q08378 1498 aa29.29■■■□□ 2.28
PRDM8-202ENST00000415738 BIVM-ERCC5R4GMW8 1640 aa29.25■■■□□ 2.27
PRDM8-202ENST00000415738 CUX1P39880 1505 aa29.21■■■□□ 2.27
PRDM8-202ENST00000415738 CEP164Q9UPV0 1460 aa29.2■■■□□ 2.26
PRDM8-202ENST00000415738 CADPSQ9ULU8 1353 aa29.18■■■□□ 2.26
PRDM8-202ENST00000415738 BCL11AQ9H165 835 aa29.16■■■□□ 2.26
PRDM8-202ENST00000415738 KIF21BO75037 1637 aa29.13■■■□□ 2.25
PRDM8-202ENST00000415738 DIEXFQ68CQ4 756 aaKnown RBP29.11■■■□□ 2.25
PRDM8-202ENST00000415738 TTBK1Q5TCY1 1321 aaPredicted RBP29.08■■■□□ 2.25
PRDM8-202ENST00000415738 PRDM2Q13029 1718 aa29.07■■■□□ 2.24
PRDM8-202ENST00000415738 RAPGEF2Q9Y4G8 1499 aa29.06■■■□□ 2.24
PRDM8-202ENST00000415738 RANGAP1P46060 587 aaPredicted RBP28.96■■■□□ 2.23
PRDM8-202ENST00000415738 KIF27Q86VH2 1401 aa28.94■■■□□ 2.22
PRDM8-202ENST00000415738 YTHDC1Q96MU7 727 aaKnown RBP28.94■■■□□ 2.22
PRDM8-202ENST00000415738 CLIP1P30622 1438 aa28.93■■■□□ 2.22
PRDM8-202ENST00000415738 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.9■■■□□ 2.22
PRDM8-202ENST00000415738 FANCD2Q9BXW9 1451 aa28.89■■■□□ 2.22
PRDM8-202ENST00000415738 NESP48681 1621 aa28.88■■■□□ 2.21
PRDM8-202ENST00000415738 PRXQ9BXM0 1461 aa28.87■■■□□ 2.21
PRDM8-202ENST00000415738 FGD5Q6ZNL6 1462 aa28.81■■■□□ 2.2
PRDM8-202ENST00000415738 DNAJC5BQ9UF47 199 aa28.8■■■□□ 2.2
PRDM8-202ENST00000415738 ERICH3Q5RHP9 1530 aa28.8■■■□□ 2.2
PRDM8-202ENST00000415738 CUX2O14529 1486 aa28.8■■■□□ 2.2
PRDM8-202ENST00000415738 CCER1Q8TC90 406 aaPredicted RBP28.78■■■□□ 2.2
PRDM8-202ENST00000415738 VPS8Q8N3P4 1428 aa28.7■■■□□ 2.19
PRDM8-202ENST00000415738 IGF1RP08069 1367 aa28.66■■■□□ 2.18
PRDM8-202ENST00000415738 DNMBPQ6XZF7 1577 aa28.64■■■□□ 2.18
PRDM8-202ENST00000415738 LAMC3Q9Y6N6 1575 aa28.64■■■□□ 2.18
PRDM8-202ENST00000415738 TOPBP1Q92547 1522 aa28.63■■■□□ 2.17
PRDM8-202ENST00000415738 ANP32EQ9BTT0 268 aa28.62■■■□□ 2.17
PRDM8-202ENST00000415738 APLP2Q06481 763 aa28.6■■■□□ 2.17
PRDM8-202ENST00000415738 RAD54L2Q9Y4B4 1467 aa28.59■■■□□ 2.17
PRDM8-202ENST00000415738 POLA1P09884 1462 aaPredicted RBP28.56■■■□□ 2.16
PRDM8-202ENST00000415738 CARMIL1Q5VZK9 1371 aa28.55■■■□□ 2.16
PRDM8-202ENST00000415738 ARAP1Q96P48 1450 aa28.51■■■□□ 2.16
PRDM8-202ENST00000415738 PDS5BQ9NTI5 1447 aa28.5■■■□□ 2.15
PRDM8-202ENST00000415738 PRKCSHP14314 528 aaPredicted RBP28.5■■■□□ 2.15
PRDM8-202ENST00000415738 URB2Q14146 1524 aaKnown RBP28.5■■■□□ 2.15
PRDM8-202ENST00000415738 ABCA10Q8WWZ4 1543 aa28.46■■■□□ 2.15
PRDM8-202ENST00000415738 ARHGAP35Q9NRY4 1499 aa28.39■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms