Protein–RNA interactions for Protein: Q86U42

PABPN1, Polyadenylate-binding protein 2, humanhuman

Known RBP eCLIP

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1Q86U42 GUSBP11-202ENST00000430357 696 ntTSL 328.85■■■□□ 2.217e-8■□□□□ 9.5
PABPN1Q86U42 SSUH2-206ENST00000427408 559 ntTSL 328.31■■■□□ 2.127e-8■□□□□ 9.5
PABPN1Q86U42 CABIN1-212ENST00000495121 361 ntTSL 527.53■■■□□ 27e-8■□□□□ 9.5
PABPN1Q86U42 HNRNPH1-224ENST00000514731 1371 ntTSL 227.21■■□□□ 1.954e-13■□□□□ 9.5
PABPN1Q86U42 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC26.73■■□□□ 1.877e-8■□□□□ 9.5
PABPN1Q86U42 GUSBP11-204ENST00000451837 3234 ntTSL 1 (best)25.68■■□□□ 1.77e-8■□□□□ 9.5
PABPN1Q86U42 MSH5-SAPCD1-205ENST00000476085 950 ntAPPRIS ALT2 TSL 225.63■■□□□ 1.697e-8■□□□□ 9.5
PABPN1Q86U42 CHKA-203ENST00000525155 1201 ntTSL 525.37■■□□□ 1.657e-8■□□□□ 9.5
PABPN1Q86U42 AP000346.2-202ENST00000425948 383 ntBASIC25.19■■□□□ 1.627e-8■□□□□ 9.5
PABPN1Q86U42 CYP4F12-205ENST00000518629 1915 ntTSL 225.16■■□□□ 1.627e-8■□□□□ 9.5
PABPN1Q86U42 CYP4F12-201ENST00000324632 1687 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.457e-8■□□□□ 9.5
PABPN1Q86U42 AP000346.1-201ENST00000390329 1087 ntTSL 5 BASIC23.99■■□□□ 1.437e-8■□□□□ 9.5
PABPN1Q86U42 AP000346.2-201ENST00000430707 906 ntTSL 1 (best) BASIC23.72■■□□□ 1.397e-8■□□□□ 9.5
PABPN1Q86U42 CYP4F12-215ENST00000550308 2044 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.227e-8■□□□□ 9.5
PABPN1Q86U42 HNRNPH1-247ENST00000523921 584 ntTSL 222.68■■□□□ 1.224e-13■□□□□ 9.5
PABPN1Q86U42 CYP4F12-216ENST00000550627 2264 ntTSL 222.26■■□□□ 1.157e-8■□□□□ 9.5
PABPN1Q86U42 HNRNPH1-239ENST00000521173 831 ntTSL 520.82■□□□□ 0.924e-13■□□□□ 9.5
PABPN1Q86U42 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC20.46■□□□□ 0.877e-8■□□□□ 9.5
PABPN1Q86U42 FANCA-225ENST00000567621 618 ntTSL 319.58■□□□□ 0.721e-7■□□□□ 9.5
PABPN1Q86U42 CHKA-207ENST00000533728 662 ntTSL 219.12■□□□□ 0.657e-8■□□□□ 9.5
PABPN1Q86U42 GUSBP11-203ENST00000445682 3350 ntTSL 218.98■□□□□ 0.637e-8■□□□□ 9.5
PABPN1Q86U42 CYP4F12-204ENST00000517734 2860 ntTSL 216.25■□□□□ 0.197e-8■□□□□ 9.5
PABPN1Q86U42 CYP4F12-206ENST00000546608 3256 ntTSL 213.33□□□□□ -0.287e-8■□□□□ 9.5
PABPN1Q86U42 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC29.68■■■□□ 2.342e-11■□□□□ 9.4
PABPN1Q86U42 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC24.64■■□□□ 1.542e-11■□□□□ 9.4
PABPN1Q86U42 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC24.01■■□□□ 1.432e-11■□□□□ 9.4
PABPN1Q86U42 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC23.69■■□□□ 1.382e-11■□□□□ 9.4
PABPN1Q86U42 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.212e-11■□□□□ 9.4
PABPN1Q86U42 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC22.21■■□□□ 1.152e-11■□□□□ 9.4
PABPN1Q86U42 HMGCS1-201ENST00000325110 3506 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.763e-10■□□□□ 9.4
PABPN1Q86U42 HMGCS1-202ENST00000433297 3466 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.193e-10■□□□□ 9.4
PABPN1Q86U42 SPG7-207ENST00000563218 654 ntTSL 528.33■■■□□ 2.137e-8■□□□□ 9.4
PABPN1Q86U42 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC47.35■■■■■ 5.171e-8■□□□□ 9.4
PABPN1Q86U42 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC46.79■■■■■ 5.081e-8■□□□□ 9.4
PABPN1Q86U42 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC30.86■■■□□ 2.531e-8■□□□□ 9.4
PABPN1Q86U42 BRD1-204ENST00000438393 3051 ntTSL 223.52■■□□□ 1.361e-8■□□□□ 9.4
PABPN1Q86U42 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC21.54■■□□□ 1.041e-8■□□□□ 9.4
PABPN1Q86U42 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC21.13■□□□□ 0.971e-8■□□□□ 9.4
PABPN1Q86U42 LMNA-206ENST00000368300 3190 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.861e-8■□□□□ 9.4
PABPN1Q86U42 BRD1-201ENST00000216267 4614 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.811e-8■□□□□ 9.4
PABPN1Q86U42 BRD1-202ENST00000404034 4312 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.761e-8■□□□□ 9.4
PABPN1Q86U42 ARPC2-212ENST00000477992 2221 ntTSL 219.59■□□□□ 0.731e-8■□□□□ 9.4
PABPN1Q86U42 BRD1-203ENST00000404760 4550 ntTSL 2 BASIC17.26■□□□□ 0.351e-8■□□□□ 9.4
PABPN1Q86U42 ARPC2-209ENST00000470146 2226 ntTSL 216.46■□□□□ 0.231e-8■□□□□ 9.4
PABPN1Q86U42 ARPC2-206ENST00000456575 644 ntTSL 313.53□□□□□ -0.241e-8■□□□□ 9.4
PABPN1Q86U42 ARPC2-216ENST00000487321 550 ntTSL 213.32□□□□□ -0.281e-8■□□□□ 9.4
PABPN1Q86U42 ANAPC7-207ENST00000486321 748 ntTSL 211.08□□□□□ -0.641e-8■□□□□ 9.4
PABPN1Q86U42 FGFR4-213ENST00000511076 838 ntTSL 538.1■■■■□ 3.698e-7■□□□□ 9.3
PABPN1Q86U42 CTSA-215ENST00000607187 509 ntTSL 219.96■□□□□ 0.792e-8■□□□□ 9.3
PABPN1Q86U42 UQCRC2-202ENST00000561553 1415 ntTSL 5 BASIC17.8■□□□□ 0.442e-7■□□□□ 9.3
PABPN1Q86U42 UQCRC2-201ENST00000268379 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.32e-7■□□□□ 9.3
PABPN1Q86U42 UQCRC2-205ENST00000563898 1406 ntTSL 514.78□□□□□ -0.042e-7■□□□□ 9.3
PABPN1Q86U42 UQCRC2-207ENST00000565331 565 ntTSL 311.87□□□□□ -0.512e-7■□□□□ 9.3
PABPN1Q86U42 U2AF2-204ENST00000587275 554 ntTSL 442.4■■■■■ 4.384e-8■□□□□ 9.3
PABPN1Q86U42 ZSWIM5-202ENST00000464588 390 ntTSL 332.31■■■□□ 2.764e-8■□□□□ 9.3
PABPN1Q86U42 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.684e-8■□□□□ 9.3
PABPN1Q86U42 ERBB3-201ENST00000267101 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.394e-8■□□□□ 9.3
PABPN1Q86U42 ERBB3-213ENST00000549832 3289 ntTSL 2 BASIC13.78□□□□□ -0.24e-8■□□□□ 9.3
PABPN1Q86U42 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.344e-8■□□□□ 9.3
PABPN1Q86U42 ARAP1-217ENST00000542612 428 ntTSL 528.93■■■□□ 2.223e-6■□□□□ 9.3
PABPN1Q86U42 HNRNPH1-240ENST00000521720 539 ntTSL 332.67■■■□□ 2.821e-13■□□□□ 9.3
PABPN1Q86U42 HNRNPH1-205ENST00000502632 1509 ntTSL 227.71■■■□□ 2.031e-13■□□□□ 9.3
PABPN1Q86U42 ARAP1-212ENST00000536885 639 ntTSL 236.23■■■■□ 3.392e-6■□□□□ 9.3
PABPN1Q86U42 ARAP1-214ENST00000541623 533 ntTSL 531.22■■■□□ 2.592e-6■□□□□ 9.3
PABPN1Q86U42 ANAPC7-211ENST00000552087 910 ntTSL 531.99■■■□□ 2.711e-6■□□□□ 9.3
PABPN1Q86U42 ANAPC7-206ENST00000481473 1836 ntTSL 1 (best)22.94■■□□□ 1.261e-6■□□□□ 9.3
PABPN1Q86U42 ANAPC7-203ENST00000455511 3045 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.711e-6■□□□□ 9.3
PABPN1Q86U42 SRPK1-201ENST00000346162 4762 ntTSL 222.62■■□□□ 1.211e-9■□□□□ 9.3
PABPN1Q86U42 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.731e-9■□□□□ 9.3
PABPN1Q86U42 SRPK1-202ENST00000361690 4286 ntTSL 1 (best)17.38■□□□□ 0.371e-9■□□□□ 9.3
PABPN1Q86U42 SRPK1-205ENST00000423325 4357 ntTSL 2 BASIC16.25■□□□□ 0.191e-9■□□□□ 9.3
PABPN1Q86U42 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC56.4■■■■■ 6.621e-8■□□□□ 9.3
PABPN1Q86U42 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC49.78■■■■■ 5.561e-8■□□□□ 9.3
PABPN1Q86U42 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC49.78■■■■■ 5.561e-8■□□□□ 9.3
PABPN1Q86U42 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC47.6■■■■■ 5.211e-8■□□□□ 9.3
PABPN1Q86U42 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC40.48■■■■■ 4.071e-8■□□□□ 9.3
PABPN1Q86U42 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC37.96■■■■□ 3.671e-8■□□□□ 9.3
PABPN1Q86U42 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC37.22■■■■□ 3.551e-8■□□□□ 9.3
PABPN1Q86U42 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC34.45■■■■□ 3.111e-8■□□□□ 9.3
PABPN1Q86U42 MAZ-213ENST00000568411 599 ntTSL 333.71■■■□□ 2.991e-8■□□□□ 9.3
PABPN1Q86U42 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC33.18■■■□□ 2.91e-8■□□□□ 9.3
PABPN1Q86U42 MAZ-209ENST00000565777 1313 ntTSL 231.74■■■□□ 2.671e-8■□□□□ 9.3
PABPN1Q86U42 MAP3K11-211ENST00000533032 579 ntTSL 356.42■■■■■ 6.627e-7■□□□□ 9.3
PABPN1Q86U42 MAP3K11-202ENST00000524848 2139 ntTSL 232.75■■■□□ 2.837e-7■□□□□ 9.3
PABPN1Q86U42 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC24.17■■□□□ 1.467e-7■□□□□ 9.3
PABPN1Q86U42 RETSAT-205ENST00000449375 1759 ntTSL 528.1■■■□□ 2.097e-8■□□□□ 9.3
PABPN1Q86U42 RETSAT-204ENST00000438611 1500 ntTSL 522.3■■□□□ 1.167e-8■□□□□ 9.3
PABPN1Q86U42 RETSAT-203ENST00000429806 2335 ntTSL 1 (best)19.38■□□□□ 0.697e-8■□□□□ 9.3
PABPN1Q86U42 RETSAT-201ENST00000295802 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.177e-8■□□□□ 9.3
PABPN1Q86U42 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC48.61■■■■■ 5.374e-6■□□□□ 9.3
PABPN1Q86U42 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC45.37■■■■■ 4.854e-6■□□□□ 9.3
PABPN1Q86U42 TCF3-219ENST00000610756 1343 ntTSL 1 (best)38.78■■■■□ 3.81e-6■□□□□ 9.3
PABPN1Q86U42 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC35.27■■■■□ 3.244e-6■□□□□ 9.3
PABPN1Q86U42 RPL13A-208ENST00000477613 796 ntTSL 535.21■■■■□ 3.234e-6■□□□□ 9.3
PABPN1Q86U42 TRAP1-213ENST00000575707 785 ntTSL 534.18■■■■□ 3.064e-6■□□□□ 9.3
PABPN1Q86U42 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC33.83■■■■□ 3.011e-6■□□□□ 9.3
PABPN1Q86U42 FGFR1-239ENST00000533619 540 ntTSL 433.35■■■□□ 2.934e-6■□□□□ 9.3
PABPN1Q86U42 RPL13A-211ENST00000486930 652 ntTSL 332■■■□□ 2.714e-6■□□□□ 9.3
PABPN1Q86U42 TPI1-206ENST00000488464 791 ntTSL 5 BASIC31.89■■■□□ 2.74e-6■□□□□ 9.3
PABPN1Q86U42 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC31.83■■■□□ 2.694e-6■□□□□ 9.3
Retrieved 100 of 8,254 protein–RNA pairs in 84.7 ms