RNA–Protein interactions for RNA: ENST00000390329.3

AP000346.1-201, humanhuman

TSL 5 BASIC

Gene AP000346.1, Length 1,087 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000346.1-201ENST00000390329 NISCHQ9Y2I1 1504 aa27.34■■□□□ 1.97
AP000346.1-201ENST00000390329 ABCC9O60706 1549 aa25.8■■□□□ 1.72
AP000346.1-201ENST00000390329 DNAJC5BQ9UF47 199 aa25.09■■□□□ 1.61
AP000346.1-201ENST00000390329 CCDC180Q9P1Z9 1646 aa24.76■■□□□ 1.55
AP000346.1-201ENST00000390329 RB1CC1Q8TDY2 1594 aa24.04■■□□□ 1.44
AP000346.1-201ENST00000390329 PABPN1Q86U42 306 aaKnown RBP eCLIP23.99■■□□□ 1.437e-8■□□□□ 9.5
AP000346.1-201ENST00000390329 DCAF8L2P0C7V8 631 aa23.67■■□□□ 1.38
AP000346.1-201ENST00000390329 NACADO15069 1562 aa23.66■■□□□ 1.38
AP000346.1-201ENST00000390329 DNAJC5Q9H3Z4 198 aa23.57■■□□□ 1.36
AP000346.1-201ENST00000390329 UNC13AQ9UPW8 1703 aa23.51■■□□□ 1.35
AP000346.1-201ENST00000390329 BICRAQ9NZM4 1560 aa23.44■■□□□ 1.34
AP000346.1-201ENST00000390329 CECR2Q9BXF3 1484 aa23.29■■□□□ 1.32
AP000346.1-201ENST00000390329 CC2D2AQ9P2K1 1620 aa23.19■■□□□ 1.3
AP000346.1-201ENST00000390329 MYO15BQ96JP2 1530 aa23.01■■□□□ 1.27
AP000346.1-201ENST00000390329 EIF4G1Q04637 1599 aaKnown RBP22.9■■□□□ 1.26
AP000346.1-201ENST00000390329 SHROOM4Q9ULL8 1493 aa22.86■■□□□ 1.25
AP000346.1-201ENST00000390329 SCRIBQ14160 1630 aa22.65■■□□□ 1.22
AP000346.1-201ENST00000390329 CUX2O14529 1486 aa22.45■■□□□ 1.18
AP000346.1-201ENST00000390329 DCAF1Q9Y4B6 1507 aa22.43■■□□□ 1.18
AP000346.1-201ENST00000390329 ZCCHC6Q5VYS8 1495 aaKnown RBP22.42■■□□□ 1.18
AP000346.1-201ENST00000390329 ERCC6Q03468 1493 aa22.28■■□□□ 1.16
AP000346.1-201ENST00000390329 TRIM41Q8WV44 630 aa22.25■■□□□ 1.15
AP000346.1-201ENST00000390329 NESP48681 1621 aa21.94■■□□□ 1.1
AP000346.1-201ENST00000390329 NCAPD3P42695 1498 aa21.92■■□□□ 1.1
AP000346.1-201ENST00000390329 ATAD2BQ9ULI0 1458 aa21.76■■□□□ 1.07
AP000346.1-201ENST00000390329 THOC2Q8NI27 1593 aaKnown RBP21.74■■□□□ 1.07
AP000346.1-201ENST00000390329 SMARCA2P51531 1590 aa21.63■■□□□ 1.05
AP000346.1-201ENST00000390329 HMGXB3Q12766 1538 aa21.6■■□□□ 1.05
AP000346.1-201ENST00000390329 KIF21AQ7Z4S6 1674 aa21.53■■□□□ 1.04
AP000346.1-201ENST00000390329 LAMC3Q9Y6N6 1575 aa21.5■■□□□ 1.03
AP000346.1-201ENST00000390329 BAZ1BQ9UIG0 1483 aaKnown RBP21.47■■□□□ 1.03
AP000346.1-201ENST00000390329 SMARCA4P51532 1647 aa21.47■■□□□ 1.03
AP000346.1-201ENST00000390329 PDS5BQ9NTI5 1447 aa21.46■■□□□ 1.03
AP000346.1-201ENST00000390329 OSCARQ8IYS5 282 aa21.43■■□□□ 1.02
AP000346.1-201ENST00000390329 BAZ1AQ9NRL2 1556 aaPredicted RBP21.36■■□□□ 1.01
AP000346.1-201ENST00000390329 MRC2Q9UBG0 1479 aa21.32■■□□□ 1
AP000346.1-201ENST00000390329 WDR62O43379 1518 aa21.25■□□□□ 0.99
AP000346.1-201ENST00000390329 CADPSQ9ULU8 1353 aa21.24■□□□□ 0.99
AP000346.1-201ENST00000390329 PEG3Q9GZU2 1588 aa21.22■□□□□ 0.99
AP000346.1-201ENST00000390329 RIMBP3CA6NJZ7 1639 aa21.16■□□□□ 0.98
AP000346.1-201ENST00000390329 RIMBP3BA6NNM3 1639 aa21.16■□□□□ 0.98
AP000346.1-201ENST00000390329 RIMBP3Q9UFD9 1639 aa21.16■□□□□ 0.98
AP000346.1-201ENST00000390329 MROH2BQ7Z745 1585 aa21.1■□□□□ 0.97
AP000346.1-201ENST00000390329 TRHP20396 242 aaPredicted RBP21.09■□□□□ 0.97
AP000346.1-201ENST00000390329 AEBP2Q6ZN18 517 aaPredicted RBP21.07■□□□□ 0.96
AP000346.1-201ENST00000390329 CEP164Q9UPV0 1460 aa21.06■□□□□ 0.96
AP000346.1-201ENST00000390329 CYB5RLQ6IPT4 315 aa21.05■□□□□ 0.96
AP000346.1-201ENST00000390329 ARHGEF11O15085 1522 aa21■□□□□ 0.95
AP000346.1-201ENST00000390329 FANCD2Q9BXW9 1451 aa21■□□□□ 0.95
AP000346.1-201ENST00000390329 URB2Q14146 1524 aaKnown RBP20.89■□□□□ 0.94
AP000346.1-201ENST00000390329 ZNF608Q9ULD9 1512 aaPredicted RBP20.81■□□□□ 0.92
AP000346.1-201ENST00000390329 CFTRP13569 1480 aa20.79■□□□□ 0.92
AP000346.1-201ENST00000390329 WIZO95785 1651 aa20.79■□□□□ 0.92
AP000346.1-201ENST00000390329 ARAP1Q96P48 1450 aa20.76■□□□□ 0.91
AP000346.1-201ENST00000390329 IFT140Q96RY7 1462 aa20.67■□□□□ 0.9
AP000346.1-201ENST00000390329 FBLN2P98095 1184 aa20.64■□□□□ 0.89
AP000346.1-201ENST00000390329 CHD1O14646 1710 aa20.56■□□□□ 0.88
AP000346.1-201ENST00000390329 RSF1Q96T23 1441 aaPredicted RBP20.55■□□□□ 0.88
AP000346.1-201ENST00000390329 AQRO60306 1485 aaKnown RBP eCLIP20.54■□□□□ 0.88
AP000346.1-201ENST00000390329 EIF4G3O43432 1585 aaKnown RBP20.54■□□□□ 0.88
AP000346.1-201ENST00000390329 TOPBP1Q92547 1522 aa20.49■□□□□ 0.87
AP000346.1-201ENST00000390329 TOP2AP11388 1531 aaKnown RBP20.4■□□□□ 0.86
AP000346.1-201ENST00000390329 PRDM2Q13029 1718 aa20.38■□□□□ 0.85
AP000346.1-201ENST00000390329 TARBP1Q13395 1621 aaKnown RBP20.36■□□□□ 0.85
AP000346.1-201ENST00000390329 ABCC8Q09428 1581 aa20.33■□□□□ 0.84
AP000346.1-201ENST00000390329 ILDR1Q86SU0 546 aaPredicted RBP20.32■□□□□ 0.84
AP000346.1-201ENST00000390329 CLASP1Q7Z460 1538 aa20.3■□□□□ 0.84
AP000346.1-201ENST00000390329 TDRD9Q8NDG6 1382 aaKnown RBP20.3■□□□□ 0.84
AP000346.1-201ENST00000390329 DNMBPQ6XZF7 1577 aa20.29■□□□□ 0.84
AP000346.1-201ENST00000390329 CHMP7Q8WUX9 453 aaPredicted RBP20.29■□□□□ 0.84
AP000346.1-201ENST00000390329 CCDC88BA6NC98 1476 aa20.28■□□□□ 0.84
AP000346.1-201ENST00000390329 RAD54L2Q9Y4B4 1467 aa20.25■□□□□ 0.83
AP000346.1-201ENST00000390329 POLA1P09884 1462 aaPredicted RBP20.24■□□□□ 0.83
AP000346.1-201ENST00000390329 SNAPC4Q5SXM2 1469 aa20.23■□□□□ 0.83
AP000346.1-201ENST00000390329 GAPVD1Q14C86 1478 aa20.22■□□□□ 0.83
AP000346.1-201ENST00000390329 SYNJ1O43426 1573 aa20.2■□□□□ 0.82
AP000346.1-201ENST00000390329 SOGA1O94964 1423 aa20.19■□□□□ 0.82
AP000346.1-201ENST00000390329 MAGI1Q96QZ7 1491 aaPredicted RBP20.08■□□□□ 0.81
AP000346.1-201ENST00000390329 SYNJ2O15056 1496 aa20.05■□□□□ 0.8
AP000346.1-201ENST00000390329 KDM4FA0A1W2PPD8 638 aa20.04■□□□□ 0.8
AP000346.1-201ENST00000390329 GRIN2BQ13224 1484 aa20.04■□□□□ 0.8
AP000346.1-201ENST00000390329 ERCC6L2Q5T890 1561 aa20.03■□□□□ 0.8
AP000346.1-201ENST00000390329 FGD5Q6ZNL6 1462 aa19.99■□□□□ 0.79
AP000346.1-201ENST00000390329 WDR97A6NE52 1622 aa19.95■□□□□ 0.78
AP000346.1-201ENST00000390329 KIF13AQ9H1H9 1805 aa19.95■□□□□ 0.78
AP000346.1-201ENST00000390329 FAM69CQ0P6D2 419 aa19.89■□□□□ 0.77
AP000346.1-201ENST00000390329 CUX1P39880 1505 aa19.85■□□□□ 0.77
AP000346.1-201ENST00000390329 CEP170Q5SW79 1584 aa19.84■□□□□ 0.77
AP000346.1-201ENST00000390329 PBRM1Q86U86 1689 aa19.84■□□□□ 0.77
AP000346.1-201ENST00000390329 GRIN2AQ12879 1464 aa19.78■□□□□ 0.76
AP000346.1-201ENST00000390329 ABCC10Q5T3U5 1492 aa19.75■□□□□ 0.75
AP000346.1-201ENST00000390329 NUP160Q12769 1436 aa19.73■□□□□ 0.75
AP000346.1-201ENST00000390329 NPM1P06748 294 aaKnown RBP eCLIP19.71■□□□□ 0.75
AP000346.1-201ENST00000390329 KDM6BO15054 1643 aa19.7■□□□□ 0.74
AP000346.1-201ENST00000390329 SHROOM2Q13796 1616 aa19.7■□□□□ 0.74
AP000346.1-201ENST00000390329 ABCA5Q8WWZ7 1642 aa19.69■□□□□ 0.74
AP000346.1-201ENST00000390329 ABCA10Q8WWZ4 1543 aa19.69■□□□□ 0.74
AP000346.1-201ENST00000390329 PRG4Q92954 1404 aaPredicted RBP19.68■□□□□ 0.74
AP000346.1-201ENST00000390329 JPH4Q96JJ6 628 aa19.65■□□□□ 0.74
AP000346.1-201ENST00000390329 DIP2BQ9P265 1576 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms