RNA–Protein interactions for RNA: ENST00000438611.4

RETSAT-204, Transcript of retinol saturase, humanhuman

TSL 5

Gene RETSAT, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETSAT-204ENST00000438611 NISCHQ9Y2I1 1504 aa26.3■■□□□ 1.8
RETSAT-204ENST00000438611 ABCC9O60706 1549 aa24.06■■□□□ 1.44
RETSAT-204ENST00000438611 CCDC180Q9P1Z9 1646 aa23.77■■□□□ 1.4
RETSAT-204ENST00000438611 DNAJC5BQ9UF47 199 aa22.87■■□□□ 1.25
RETSAT-204ENST00000438611 RB1CC1Q8TDY2 1594 aa22.76■■□□□ 1.23
RETSAT-204ENST00000438611 NACADO15069 1562 aa22.53■■□□□ 1.2
RETSAT-204ENST00000438611 PABPN1Q86U42 306 aaKnown RBP eCLIP22.3■■□□□ 1.167e-8■□□□□ 9.3
RETSAT-204ENST00000438611 UNC13AQ9UPW8 1703 aa22.26■■□□□ 1.15
RETSAT-204ENST00000438611 BICRAQ9NZM4 1560 aa22.17■■□□□ 1.14
RETSAT-204ENST00000438611 MYO15BQ96JP2 1530 aa22.16■■□□□ 1.14
RETSAT-204ENST00000438611 DCAF8L2P0C7V8 631 aa22.16■■□□□ 1.14
RETSAT-204ENST00000438611 SHROOM4Q9ULL8 1493 aa21.85■■□□□ 1.09
RETSAT-204ENST00000438611 ZCCHC6Q5VYS8 1495 aaKnown RBP21.81■■□□□ 1.08
RETSAT-204ENST00000438611 CC2D2AQ9P2K1 1620 aa21.74■■□□□ 1.07
RETSAT-204ENST00000438611 DCAF1Q9Y4B6 1507 aa21.74■■□□□ 1.07
RETSAT-204ENST00000438611 CECR2Q9BXF3 1484 aa21.72■■□□□ 1.07
RETSAT-204ENST00000438611 EIF4G1Q04637 1599 aaKnown RBP21.63■■□□□ 1.05
RETSAT-204ENST00000438611 SCRIBQ14160 1630 aa21.61■■□□□ 1.05
RETSAT-204ENST00000438611 DNAJC5Q9H3Z4 198 aa21.23■□□□□ 0.99
RETSAT-204ENST00000438611 CUX2O14529 1486 aa20.92■□□□□ 0.94
RETSAT-204ENST00000438611 NCAPD3P42695 1498 aa20.81■□□□□ 0.92
RETSAT-204ENST00000438611 ERCC6Q03468 1493 aa20.77■□□□□ 0.92
RETSAT-204ENST00000438611 ATAD2BQ9ULI0 1458 aa20.71■□□□□ 0.91
RETSAT-204ENST00000438611 HMGXB3Q12766 1538 aa20.66■□□□□ 0.9
RETSAT-204ENST00000438611 SMARCA2P51531 1590 aa20.62■□□□□ 0.89
RETSAT-204ENST00000438611 SMARCA4P51532 1647 aa20.6■□□□□ 0.89
RETSAT-204ENST00000438611 NESP48681 1621 aa20.59■□□□□ 0.89
RETSAT-204ENST00000438611 THOC2Q8NI27 1593 aaKnown RBP20.5■□□□□ 0.87
RETSAT-204ENST00000438611 BAZ1BQ9UIG0 1483 aaKnown RBP20.47■□□□□ 0.87
RETSAT-204ENST00000438611 PEG3Q9GZU2 1588 aa20.45■□□□□ 0.86
RETSAT-204ENST00000438611 BAZ1AQ9NRL2 1556 aaPredicted RBP20.43■□□□□ 0.86
RETSAT-204ENST00000438611 LAMC3Q9Y6N6 1575 aa20.39■□□□□ 0.86
RETSAT-204ENST00000438611 KIF21AQ7Z4S6 1674 aa20.31■□□□□ 0.84
RETSAT-204ENST00000438611 MROH2BQ7Z745 1585 aa20.27■□□□□ 0.84
RETSAT-204ENST00000438611 PDS5BQ9NTI5 1447 aa20.25■□□□□ 0.83
RETSAT-204ENST00000438611 MRC2Q9UBG0 1479 aa20.14■□□□□ 0.81
RETSAT-204ENST00000438611 WDR62O43379 1518 aa20.14■□□□□ 0.81
RETSAT-204ENST00000438611 CADPSQ9ULU8 1353 aa20.13■□□□□ 0.81
RETSAT-204ENST00000438611 TRIM41Q8WV44 630 aa20.1■□□□□ 0.81
RETSAT-204ENST00000438611 RSF1Q96T23 1441 aaPredicted RBP20.05■□□□□ 0.8
RETSAT-204ENST00000438611 SUPT5HO00267 1087 aaKnown RBP20.03■□□□□ 0.8
RETSAT-204ENST00000438611 WIZO95785 1651 aa19.98■□□□□ 0.79
RETSAT-204ENST00000438611 CEP164Q9UPV0 1460 aa19.98■□□□□ 0.79
RETSAT-204ENST00000438611 FANCD2Q9BXW9 1451 aa19.92■□□□□ 0.78
RETSAT-204ENST00000438611 CFTRP13569 1480 aa19.87■□□□□ 0.77
RETSAT-204ENST00000438611 URB2Q14146 1524 aaKnown RBP19.81■□□□□ 0.76
RETSAT-204ENST00000438611 OSCARQ8IYS5 282 aa19.79■□□□□ 0.76
RETSAT-204ENST00000438611 TOP2AP11388 1531 aaKnown RBP19.74■□□□□ 0.75
RETSAT-204ENST00000438611 RIMBP3CA6NJZ7 1639 aa19.67■□□□□ 0.74
RETSAT-204ENST00000438611 RIMBP3BA6NNM3 1639 aa19.67■□□□□ 0.74
RETSAT-204ENST00000438611 RIMBP3Q9UFD9 1639 aa19.67■□□□□ 0.74
RETSAT-204ENST00000438611 PRDM2Q13029 1718 aa19.63■□□□□ 0.73
RETSAT-204ENST00000438611 ZNF608Q9ULD9 1512 aaPredicted RBP19.61■□□□□ 0.73
RETSAT-204ENST00000438611 IFT140Q96RY7 1462 aa19.59■□□□□ 0.73
RETSAT-204ENST00000438611 ARHGEF11O15085 1522 aa19.59■□□□□ 0.73
RETSAT-204ENST00000438611 TOPBP1Q92547 1522 aa19.52■□□□□ 0.71
RETSAT-204ENST00000438611 EIF4G3O43432 1585 aaKnown RBP19.51■□□□□ 0.71
RETSAT-204ENST00000438611 CCDC88BA6NC98 1476 aa19.49■□□□□ 0.71
RETSAT-204ENST00000438611 DNMBPQ6XZF7 1577 aa19.42■□□□□ 0.7
RETSAT-204ENST00000438611 ABCC8Q09428 1581 aa19.41■□□□□ 0.7
RETSAT-204ENST00000438611 TARBP1Q13395 1621 aaKnown RBP19.39■□□□□ 0.69
RETSAT-204ENST00000438611 CHD1O14646 1710 aa19.39■□□□□ 0.69
RETSAT-204ENST00000438611 ARAP1Q96P48 1450 aa19.38■□□□□ 0.69
RETSAT-204ENST00000438611 AQRO60306 1485 aaKnown RBP eCLIP19.35■□□□□ 0.692e-6■■■■□ 25.4
RETSAT-204ENST00000438611 CYB5RLQ6IPT4 315 aa19.35■□□□□ 0.69
RETSAT-204ENST00000438611 POLA1P09884 1462 aaPredicted RBP19.31■□□□□ 0.68
RETSAT-204ENST00000438611 RAD54L2Q9Y4B4 1467 aa19.21■□□□□ 0.67
RETSAT-204ENST00000438611 CLASP1Q7Z460 1538 aa19.21■□□□□ 0.67
RETSAT-204ENST00000438611 TRHP20396 242 aaPredicted RBP19.2■□□□□ 0.66
RETSAT-204ENST00000438611 FBLN2P98095 1184 aa19.19■□□□□ 0.66
RETSAT-204ENST00000438611 SNAPC4Q5SXM2 1469 aa19.18■□□□□ 0.66
RETSAT-204ENST00000438611 WDR97A6NE52 1622 aa19.17■□□□□ 0.66
RETSAT-204ENST00000438611 TDRD9Q8NDG6 1382 aaKnown RBP19.16■□□□□ 0.66
RETSAT-204ENST00000438611 SOGA1O94964 1423 aa19.15■□□□□ 0.66
RETSAT-204ENST00000438611 FGD5Q6ZNL6 1462 aa19.12■□□□□ 0.65
RETSAT-204ENST00000438611 MAGI1Q96QZ7 1491 aaPredicted RBP19.12■□□□□ 0.65
RETSAT-204ENST00000438611 SYNJ1O43426 1573 aa19.11■□□□□ 0.65
RETSAT-204ENST00000438611 CUX1P39880 1505 aa19.07■□□□□ 0.64
RETSAT-204ENST00000438611 GRIN2BQ13224 1484 aa19.06■□□□□ 0.64
RETSAT-204ENST00000438611 SYNJ2O15056 1496 aa19.05■□□□□ 0.64
RETSAT-204ENST00000438611 CHMP7Q8WUX9 453 aaPredicted RBP19.02■□□□□ 0.64
RETSAT-204ENST00000438611 PBRM1Q86U86 1689 aa18.97■□□□□ 0.63
RETSAT-204ENST00000438611 GAPVD1Q14C86 1478 aa18.97■□□□□ 0.63
RETSAT-204ENST00000438611 CHIC1Q5VXU3 224 aa18.95■□□□□ 0.62
RETSAT-204ENST00000438611 WRNQ14191 1432 aaPredicted RBP eCLIP18.93■□□□□ 0.62
RETSAT-204ENST00000438611 ABCA5Q8WWZ7 1642 aa18.93■□□□□ 0.62
RETSAT-204ENST00000438611 ABCA10Q8WWZ4 1543 aa18.9■□□□□ 0.62
RETSAT-204ENST00000438611 AEBP2Q6ZN18 517 aaPredicted RBP18.88■□□□□ 0.61
RETSAT-204ENST00000438611 ERCC6L2Q5T890 1561 aa18.87■□□□□ 0.61
RETSAT-204ENST00000438611 GRIN2AQ12879 1464 aa18.83■□□□□ 0.61
RETSAT-204ENST00000438611 ADAMTS12P58397 1594 aa18.81■□□□□ 0.6
RETSAT-204ENST00000438611 NUP160Q12769 1436 aa18.81■□□□□ 0.6
RETSAT-204ENST00000438611 CEP170Q5SW79 1584 aa18.8■□□□□ 0.6
RETSAT-204ENST00000438611 TOP2BQ02880 1626 aa18.8■□□□□ 0.6
RETSAT-204ENST00000438611 BIVM-ERCC5R4GMW8 1640 aa18.78■□□□□ 0.6
RETSAT-204ENST00000438611 SHROOM2Q13796 1616 aa18.77■□□□□ 0.59
RETSAT-204ENST00000438611 FHAD1B1AJZ9 1412 aa18.69■□□□□ 0.58
RETSAT-204ENST00000438611 KIF13AQ9H1H9 1805 aa18.67■□□□□ 0.58
RETSAT-204ENST00000438611 ERICH3Q5RHP9 1530 aa18.65■□□□□ 0.58
RETSAT-204ENST00000438611 PRG4Q92954 1404 aaPredicted RBP18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms