RNA–Protein interactions for RNA: ENST00000267101.7

ERBB3-201, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERBB3, Length 5,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-201ENST00000267101 NISCHQ9Y2I1 1504 aa21.16■□□□□ 0.98
ERBB3-201ENST00000267101 DCAF8L2P0C7V8 631 aa19.96■□□□□ 0.79
ERBB3-201ENST00000267101 SHROOM4Q9ULL8 1493 aa18.96■□□□□ 0.63
ERBB3-201ENST00000267101 SUPT5HO00267 1087 aaKnown RBP18.78■□□□□ 0.6
ERBB3-201ENST00000267101 ABCC9O60706 1549 aa18.01■□□□□ 0.47
ERBB3-201ENST00000267101 CCDC180Q9P1Z9 1646 aa17.98■□□□□ 0.47
ERBB3-201ENST00000267101 EHMT2Q96KQ7 1210 aa17.75■□□□□ 0.43
ERBB3-201ENST00000267101 ZCCHC6Q5VYS8 1495 aaKnown RBP17.61■□□□□ 0.41
ERBB3-201ENST00000267101 FAM9AQ8IZU1 332 aaPredicted RBP17.57■□□□□ 0.4
ERBB3-201ENST00000267101 TRIM41Q8WV44 630 aa17.56■□□□□ 0.4
ERBB3-201ENST00000267101 PABPN1Q86U42 306 aaKnown RBP eCLIP17.48■□□□□ 0.394e-8■□□□□ 9.3
ERBB3-201ENST00000267101 SCRIBQ14160 1630 aa17.39■□□□□ 0.37
ERBB3-201ENST00000267101 APLP2Q06481 763 aa17.38■□□□□ 0.37
ERBB3-201ENST00000267101 RB1CC1Q8TDY2 1594 aa17.25■□□□□ 0.35
ERBB3-201ENST00000267101 PCGF6Q9BYE7 350 aa17.25■□□□□ 0.35
ERBB3-201ENST00000267101 RANGAP1P46060 587 aaPredicted RBP17.18■□□□□ 0.34
ERBB3-201ENST00000267101 NACADO15069 1562 aa17.16■□□□□ 0.34
ERBB3-201ENST00000267101 UBTFP17480 764 aaKnown RBP17.16■□□□□ 0.34
ERBB3-201ENST00000267101 TTBK1Q5TCY1 1321 aaPredicted RBP17.08■□□□□ 0.33
ERBB3-201ENST00000267101 CHIC1Q5VXU3 224 aa17.08■□□□□ 0.32
ERBB3-201ENST00000267101 PELP1Q8IZL8 1130 aaKnown RBP17.02■□□□□ 0.32
ERBB3-201ENST00000267101 DCAF1Q9Y4B6 1507 aa17.02■□□□□ 0.32
ERBB3-201ENST00000267101 ATP1B4Q9UN42 357 aaPredicted RBP16.98■□□□□ 0.31
ERBB3-201ENST00000267101 ZEB1P37275 1124 aaPredicted RBP16.93■□□□□ 0.3
ERBB3-201ENST00000267101 CCER1Q8TC90 406 aaPredicted RBP16.85■□□□□ 0.29
ERBB3-201ENST00000267101 LOC105371045A0A1W2PR82 267 aa16.8■□□□□ 0.28
ERBB3-201ENST00000267101 CENPBP07199 599 aaPredicted RBP16.7■□□□□ 0.26
ERBB3-201ENST00000267101 PPARGC1BQ86YN6 1023 aaKnown RBP16.67■□□□□ 0.26
ERBB3-201ENST00000267101 MYO15BQ96JP2 1530 aa16.66■□□□□ 0.26
ERBB3-201ENST00000267101 RSF1Q96T23 1441 aaPredicted RBP16.65■□□□□ 0.26
ERBB3-201ENST00000267101 TRIM26Q12899 539 aaPredicted RBP16.61■□□□□ 0.25
ERBB3-201ENST00000267101 BAZ1AQ9NRL2 1556 aaPredicted RBP16.57■□□□□ 0.24
ERBB3-201ENST00000267101 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.54■□□□□ 0.24
ERBB3-201ENST00000267101 HNRNPUL2Q1KMD3 747 aaKnown RBP16.54■□□□□ 0.24
ERBB3-201ENST00000267101 BAZ1BQ9UIG0 1483 aaKnown RBP16.52■□□□□ 0.24
ERBB3-201ENST00000267101 CECR2Q9BXF3 1484 aa16.47■□□□□ 0.23
ERBB3-201ENST00000267101 HRCP23327 699 aa16.45■□□□□ 0.22
ERBB3-201ENST00000267101 CSRNP3Q8WYN3 585 aa16.42■□□□□ 0.22
ERBB3-201ENST00000267101 ITGAEP38570 1179 aa16.37■□□□□ 0.21
ERBB3-201ENST00000267101 FBLN2P98095 1184 aa16.37■□□□□ 0.21
ERBB3-201ENST00000267101 MROH2BQ7Z745 1585 aa16.34■□□□□ 0.21
ERBB3-201ENST00000267101 YTHDC1Q96MU7 727 aaKnown RBP16.34■□□□□ 0.21
ERBB3-201ENST00000267101 SMARCA2P51531 1590 aa16.29■□□□□ 0.2
ERBB3-201ENST00000267101 MYT1LQ9UL68 1186 aa16.28■□□□□ 0.2
ERBB3-201ENST00000267101 NEFLP07196 543 aa16.27■□□□□ 0.19
ERBB3-201ENST00000267101 ERICH6Q7L0X2 663 aa16.23■□□□□ 0.19
ERBB3-201ENST00000267101 WIZO95785 1651 aa16.22■□□□□ 0.19
ERBB3-201ENST00000267101 WRNQ14191 1432 aaPredicted RBP eCLIP16.2■□□□□ 0.18
ERBB3-201ENST00000267101 FAM50AQ14320 339 aaKnown RBP16.19■□□□□ 0.18
ERBB3-201ENST00000267101 P3H3Q8IVL6 736 aa16.18■□□□□ 0.18
ERBB3-201ENST00000267101 TOP2AP11388 1531 aaKnown RBP16.18■□□□□ 0.18
ERBB3-201ENST00000267101 SMARCA4P51532 1647 aa16.18■□□□□ 0.18
ERBB3-201ENST00000267101 CCDC88BA6NC98 1476 aa16.16■□□□□ 0.18
ERBB3-201ENST00000267101 EEA1Q15075 1411 aa16.12■□□□□ 0.17
ERBB3-201ENST00000267101 ERCC6Q03468 1493 aa16.07■□□□□ 0.16
ERBB3-201ENST00000267101 ATAD2BQ9ULI0 1458 aa16.04■□□□□ 0.16
ERBB3-201ENST00000267101 GOLGA3Q08378 1498 aa16.03■□□□□ 0.16
ERBB3-201ENST00000267101 KIF27Q86VH2 1401 aa16.02■□□□□ 0.15
ERBB3-201ENST00000267101 ARID3CA6NKF2 412 aa16.02■□□□□ 0.15
ERBB3-201ENST00000267101 CHMP7Q8WUX9 453 aaPredicted RBP15.98■□□□□ 0.15
ERBB3-201ENST00000267101 TRIM52Q96A61 297 aa15.97■□□□□ 0.15
ERBB3-201ENST00000267101 CDK11AQ9UQ88 783 aaPredicted RBP15.96■□□□□ 0.15
ERBB3-201ENST00000267101 POLR3GLQ9BT43 218 aa15.96■□□□□ 0.15
ERBB3-201ENST00000267101 ABCC8Q09428 1581 aa15.95■□□□□ 0.14
ERBB3-201ENST00000267101 CLIP1P30622 1438 aa15.94■□□□□ 0.14
ERBB3-201ENST00000267101 CEP164Q9UPV0 1460 aa15.94■□□□□ 0.14
ERBB3-201ENST00000267101 DIEXFQ68CQ4 756 aaKnown RBP15.93■□□□□ 0.14
ERBB3-201ENST00000267101 PDS5BQ9NTI5 1447 aa15.92■□□□□ 0.14
ERBB3-201ENST00000267101 CEP162Q5TB80 1403 aa15.87■□□□□ 0.13
ERBB3-201ENST00000267101 EIF4G1Q04637 1599 aaKnown RBP15.85■□□□□ 0.13
ERBB3-201ENST00000267101 CADPSQ9ULU8 1353 aa15.85■□□□□ 0.13
ERBB3-201ENST00000267101 CUX2O14529 1486 aa15.85■□□□□ 0.13
ERBB3-201ENST00000267101 TNIKQ9UKE5 1360 aa15.85■□□□□ 0.13
ERBB3-201ENST00000267101 ZNF777Q9ULD5 760 aaPredicted RBP15.84■□□□□ 0.13
ERBB3-201ENST00000267101 SOGA1O94964 1423 aa15.83■□□□□ 0.12
ERBB3-201ENST00000267101 MYT1Q01538 1121 aa15.82■□□□□ 0.12
ERBB3-201ENST00000267101 NEUROD1Q13562 356 aa15.81■□□□□ 0.12
ERBB3-201ENST00000267101 CNGB1Q14028 1251 aaPredicted RBP15.8■□□□□ 0.12
ERBB3-201ENST00000267101 NPM1P06748 294 aaKnown RBP eCLIP15.78■□□□□ 0.12
ERBB3-201ENST00000267101 CARMIL1Q5VZK9 1371 aa15.76■□□□□ 0.11
ERBB3-201ENST00000267101 NCAPD3P42695 1498 aa15.75■□□□□ 0.11
ERBB3-201ENST00000267101 MTUS2Q5JR59 1369 aa15.74■□□□□ 0.11
ERBB3-201ENST00000267101 FANCD2Q9BXW9 1451 aa15.7■□□□□ 0.1
ERBB3-201ENST00000267101 BICRAQ9NZM4 1560 aa15.69■□□□□ 0.1
ERBB3-201ENST00000267101 UNC13AQ9UPW8 1703 aa15.67■□□□□ 0.1
ERBB3-201ENST00000267101 CC2D2AQ9P2K1 1620 aa15.66■□□□□ 0.1
ERBB3-201ENST00000267101 DAXXQ9UER7 740 aaPredicted RBP15.65■□□□□ 0.1
ERBB3-201ENST00000267101 ZNF316A6NFI3 1004 aaPredicted RBP15.63■□□□□ 0.09
ERBB3-201ENST00000267101 HMGXB3Q12766 1538 aa15.61■□□□□ 0.09
ERBB3-201ENST00000267101 ZNF326Q5BKZ1 582 aaKnown RBP15.61■□□□□ 0.09
ERBB3-201ENST00000267101 TDRD9Q8NDG6 1382 aaKnown RBP15.61■□□□□ 0.09
ERBB3-201ENST00000267101 FHAD1B1AJZ9 1412 aa15.59■□□□□ 0.09
ERBB3-201ENST00000267101 PLEKHD1A6NEE1 506 aa15.58■□□□□ 0.09
ERBB3-201ENST00000267101 SLC4A1APQ9BWU0 796 aaKnown RBP15.58■□□□□ 0.09
ERBB3-201ENST00000267101 CHIC2Q9UKJ5 165 aa15.58■□□□□ 0.08
ERBB3-201ENST00000267101 ANP32CO43423 234 aa15.56■□□□□ 0.08
ERBB3-201ENST00000267101 RAPGEF2Q9Y4G8 1499 aa15.55■□□□□ 0.08
ERBB3-201ENST00000267101 GTF3C3Q9Y5Q9 886 aa15.53■□□□□ 0.08
ERBB3-201ENST00000267101 TSPY4P0CV99 314 aa15.53■□□□□ 0.08
ERBB3-201ENST00000267101 TSPY10P0CW01 314 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms