RNA–Protein interactions for RNA: ENST00000587275.1

U2AF2-204, Transcript of U2 small nuclear RNA auxiliary factor 2, humanhuman

TSL 4

Gene U2AF2, Length 554 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2-204ENST00000587275 NISCHQ9Y2I1 1504 aa50.95■■■■■ 5.75
U2AF2-204ENST00000587275 CCDC180Q9P1Z9 1646 aa45.81■■■■■ 4.92
U2AF2-204ENST00000587275 ABCC9O60706 1549 aa45.64■■■■■ 4.9
U2AF2-204ENST00000587275 RB1CC1Q8TDY2 1594 aa43.45■■■■■ 4.55
U2AF2-204ENST00000587275 NACADO15069 1562 aa43.16■■■■■ 4.5
U2AF2-204ENST00000587275 UNC13AQ9UPW8 1703 aa42.83■■■■■ 4.45
U2AF2-204ENST00000587275 DNAJC5BQ9UF47 199 aa42.79■■■■■ 4.44
U2AF2-204ENST00000587275 DCAF8L2P0C7V8 631 aa42.7■■■■■ 4.43
U2AF2-204ENST00000587275 MYO15BQ96JP2 1530 aa42.57■■■■■ 4.41
U2AF2-204ENST00000587275 PABPN1Q86U42 306 aaKnown RBP eCLIP42.4■■■■■ 4.384e-8■□□□□ 9.3
U2AF2-204ENST00000587275 BICRAQ9NZM4 1560 aa42.37■■■■■ 4.37
U2AF2-204ENST00000587275 ZCCHC6Q5VYS8 1495 aaKnown RBP42.28■■■■■ 4.36
U2AF2-204ENST00000587275 DCAF1Q9Y4B6 1507 aa42.07■■■■■ 4.33
U2AF2-204ENST00000587275 SCRIBQ14160 1630 aa41.73■■■■■ 4.27
U2AF2-204ENST00000587275 SHROOM4Q9ULL8 1493 aa41.58■■■■■ 4.25
U2AF2-204ENST00000587275 CC2D2AQ9P2K1 1620 aa41.32■■■■■ 4.2
U2AF2-204ENST00000587275 EIF4G1Q04637 1599 aaKnown RBP41.22■■■■■ 4.19
U2AF2-204ENST00000587275 CECR2Q9BXF3 1484 aa41.06■■■■■ 4.16
U2AF2-204ENST00000587275 SMARCA4P51532 1647 aa39.82■■■■□ 3.96
U2AF2-204ENST00000587275 NCAPD3P42695 1498 aa39.81■■■■□ 3.96
U2AF2-204ENST00000587275 ATAD2BQ9ULI0 1458 aa39.74■■■■□ 3.95
U2AF2-204ENST00000587275 HMGXB3Q12766 1538 aa39.6■■■■□ 3.93
U2AF2-204ENST00000587275 SMARCA2P51531 1590 aa39.6■■■■□ 3.93
U2AF2-204ENST00000587275 BAZ1AQ9NRL2 1556 aaPredicted RBP39.51■■■■□ 3.92
U2AF2-204ENST00000587275 PEG3Q9GZU2 1588 aa39.42■■■■□ 3.9
U2AF2-204ENST00000587275 BAZ1BQ9UIG0 1483 aaKnown RBP39.32■■■■□ 3.89
U2AF2-204ENST00000587275 MROH2BQ7Z745 1585 aa39.32■■■■□ 3.88
U2AF2-204ENST00000587275 NESP48681 1621 aa39.3■■■■□ 3.88
U2AF2-204ENST00000587275 ERCC6Q03468 1493 aa39.29■■■■□ 3.88
U2AF2-204ENST00000587275 CUX2O14529 1486 aa39.25■■■■□ 3.87
U2AF2-204ENST00000587275 DNAJC5Q9H3Z4 198 aa39.1■■■■□ 3.85
U2AF2-204ENST00000587275 THOC2Q8NI27 1593 aaKnown RBP38.98■■■■□ 3.83
U2AF2-204ENST00000587275 LAMC3Q9Y6N6 1575 aa38.96■■■■□ 3.83
U2AF2-204ENST00000587275 WIZO95785 1651 aa38.93■■■■□ 3.82
U2AF2-204ENST00000587275 KIF21AQ7Z4S6 1674 aa38.93■■■■□ 3.82
U2AF2-204ENST00000587275 PDS5BQ9NTI5 1447 aa38.57■■■■□ 3.77
U2AF2-204ENST00000587275 CADPSQ9ULU8 1353 aa38.55■■■■□ 3.76
U2AF2-204ENST00000587275 RSF1Q96T23 1441 aaPredicted RBP38.43■■■■□ 3.74
U2AF2-204ENST00000587275 MRC2Q9UBG0 1479 aa38.36■■■■□ 3.73
U2AF2-204ENST00000587275 WDR62O43379 1518 aa38.36■■■■□ 3.73
U2AF2-204ENST00000587275 TOP2AP11388 1531 aaKnown RBP38.33■■■■□ 3.73
U2AF2-204ENST00000587275 CEP164Q9UPV0 1460 aa38.21■■■■□ 3.71
U2AF2-204ENST00000587275 CFTRP13569 1480 aa38.2■■■■□ 3.71
U2AF2-204ENST00000587275 FANCD2Q9BXW9 1451 aa38.17■■■■□ 3.7
U2AF2-204ENST00000587275 PRDM2Q13029 1718 aa38.09■■■■□ 3.69
U2AF2-204ENST00000587275 URB2Q14146 1524 aaKnown RBP37.96■■■■□ 3.67
U2AF2-204ENST00000587275 CCDC88BA6NC98 1476 aa37.86■■■■□ 3.65
U2AF2-204ENST00000587275 TOPBP1Q92547 1522 aa37.51■■■■□ 3.6
U2AF2-204ENST00000587275 ZNF608Q9ULD9 1512 aaPredicted RBP37.47■■■■□ 3.59
U2AF2-204ENST00000587275 IFT140Q96RY7 1462 aa37.41■■■■□ 3.58
U2AF2-204ENST00000587275 DNMBPQ6XZF7 1577 aa37.4■■■■□ 3.58
U2AF2-204ENST00000587275 TRIM41Q8WV44 630 aa37.37■■■■□ 3.57
U2AF2-204ENST00000587275 EIF4G3O43432 1585 aaKnown RBP37.34■■■■□ 3.57
U2AF2-204ENST00000587275 OSCARQ8IYS5 282 aa37.3■■■■□ 3.56
U2AF2-204ENST00000587275 TARBP1Q13395 1621 aaKnown RBP37.28■■■■□ 3.56
U2AF2-204ENST00000587275 ABCC8Q09428 1581 aa37.28■■■■□ 3.56
U2AF2-204ENST00000587275 RIMBP3CA6NJZ7 1639 aa37.14■■■■□ 3.54
U2AF2-204ENST00000587275 RIMBP3BA6NNM3 1639 aa37.14■■■■□ 3.54
U2AF2-204ENST00000587275 RIMBP3Q9UFD9 1639 aa37.14■■■■□ 3.54
U2AF2-204ENST00000587275 POLA1P09884 1462 aaPredicted RBP37.13■■■■□ 3.54
U2AF2-204ENST00000587275 CHD1O14646 1710 aa37.13■■■■□ 3.53
U2AF2-204ENST00000587275 AQRO60306 1485 aaKnown RBP eCLIP37.07■■■■□ 3.521e-10■■■■■ 61.5
U2AF2-204ENST00000587275 RAD54L2Q9Y4B4 1467 aa37■■■■□ 3.51
U2AF2-204ENST00000587275 ARHGEF11O15085 1522 aa36.95■■■■□ 3.5
U2AF2-204ENST00000587275 CUX1P39880 1505 aa36.94■■■■□ 3.5
U2AF2-204ENST00000587275 FGD5Q6ZNL6 1462 aa36.9■■■■□ 3.5
U2AF2-204ENST00000587275 WDR97A6NE52 1622 aa36.85■■■■□ 3.49
U2AF2-204ENST00000587275 SOGA1O94964 1423 aa36.85■■■■□ 3.49
U2AF2-204ENST00000587275 TDRD9Q8NDG6 1382 aaKnown RBP36.79■■■■□ 3.48
U2AF2-204ENST00000587275 SNAPC4Q5SXM2 1469 aa36.71■■■■□ 3.47
U2AF2-204ENST00000587275 PBRM1Q86U86 1689 aa36.67■■■■□ 3.46
U2AF2-204ENST00000587275 FBLN2P98095 1184 aa36.62■■■■□ 3.45
U2AF2-204ENST00000587275 ARAP1Q96P48 1450 aa36.61■■■■□ 3.45
U2AF2-204ENST00000587275 CLASP1Q7Z460 1538 aa36.6■■■■□ 3.45
U2AF2-204ENST00000587275 SUPT5HO00267 1087 aaKnown RBP36.6■■■■□ 3.45
U2AF2-204ENST00000587275 MAGI1Q96QZ7 1491 aaPredicted RBP36.56■■■■□ 3.44
U2AF2-204ENST00000587275 ABCA5Q8WWZ7 1642 aa36.55■■■■□ 3.44
U2AF2-204ENST00000587275 GRIN2BQ13224 1484 aa36.55■■■■□ 3.44
U2AF2-204ENST00000587275 CYB5RLQ6IPT4 315 aa36.48■■■■□ 3.43
U2AF2-204ENST00000587275 ABCA10Q8WWZ4 1543 aa36.47■■■■□ 3.43
U2AF2-204ENST00000587275 SYNJ1O43426 1573 aa36.47■■■■□ 3.43
U2AF2-204ENST00000587275 SYNJ2O15056 1496 aa36.45■■■■□ 3.43
U2AF2-204ENST00000587275 GAPVD1Q14C86 1478 aa36.44■■■■□ 3.42
U2AF2-204ENST00000587275 BIVM-ERCC5R4GMW8 1640 aa36.42■■■■□ 3.42
U2AF2-204ENST00000587275 TOP2BQ02880 1626 aa36.35■■■■□ 3.41
U2AF2-204ENST00000587275 CHMP7Q8WUX9 453 aaPredicted RBP36.34■■■■□ 3.41
U2AF2-204ENST00000587275 ADAMTS12P58397 1594 aa36.24■■■■□ 3.39
U2AF2-204ENST00000587275 WRNQ14191 1432 aaPredicted RBP eCLIP36.2■■■■□ 3.39
U2AF2-204ENST00000587275 GRIN2AQ12879 1464 aa36.14■■■■□ 3.38
U2AF2-204ENST00000587275 CEP170Q5SW79 1584 aa36.13■■■■□ 3.37
U2AF2-204ENST00000587275 ERCC6L2Q5T890 1561 aa36.1■■■■□ 3.37
U2AF2-204ENST00000587275 NUP160Q12769 1436 aa36.02■■■■□ 3.36
U2AF2-204ENST00000587275 ERICH3Q5RHP9 1530 aa36■■■■□ 3.35
U2AF2-204ENST00000587275 SHROOM2Q13796 1616 aa35.99■■■■□ 3.35
U2AF2-204ENST00000587275 TRHP20396 242 aaPredicted RBP35.98■■■■□ 3.35
U2AF2-204ENST00000587275 FHAD1B1AJZ9 1412 aa35.95■■■■□ 3.35
U2AF2-204ENST00000587275 RUSC2Q8N2Y8 1516 aa35.75■■■■□ 3.31
U2AF2-204ENST00000587275 PRG4Q92954 1404 aaPredicted RBP35.59■■■■□ 3.29
U2AF2-204ENST00000587275 KIF13AQ9H1H9 1805 aa35.57■■■■□ 3.28
U2AF2-204ENST00000587275 CUL7Q14999 1698 aa35.55■■■■□ 3.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms