RNA–Protein interactions for RNA: ENST00000541623.5

ARAP1-214, Transcript of ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1, humanhuman

TSL 5

Gene ARAP1, Length 533 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARAP1-214ENST00000541623 NISCHQ9Y2I1 1504 aa38.61■■■■□ 3.77
ARAP1-214ENST00000541623 CCDC180Q9P1Z9 1646 aa34.3■■■■□ 3.08
ARAP1-214ENST00000541623 ABCC9O60706 1549 aa33.39■■■□□ 2.94
ARAP1-214ENST00000541623 NACADO15069 1562 aa32.28■■■□□ 2.76
ARAP1-214ENST00000541623 RB1CC1Q8TDY2 1594 aa32.28■■■□□ 2.76
ARAP1-214ENST00000541623 DCAF8L2P0C7V8 631 aa32.21■■■□□ 2.75
ARAP1-214ENST00000541623 MYO15BQ96JP2 1530 aa32.18■■■□□ 2.74
ARAP1-214ENST00000541623 ZCCHC6Q5VYS8 1495 aaKnown RBP32.16■■■□□ 2.74
ARAP1-214ENST00000541623 DCAF1Q9Y4B6 1507 aa32.04■■■□□ 2.72
ARAP1-214ENST00000541623 UNC13AQ9UPW8 1703 aa31.33■■■□□ 2.61
ARAP1-214ENST00000541623 PABPN1Q86U42 306 aaKnown RBP eCLIP31.22■■■□□ 2.592e-6■□□□□ 9.3
ARAP1-214ENST00000541623 SCRIBQ14160 1630 aa31.19■■■□□ 2.58
ARAP1-214ENST00000541623 BICRAQ9NZM4 1560 aa31.17■■■□□ 2.58
ARAP1-214ENST00000541623 SHROOM4Q9ULL8 1493 aa31.08■■■□□ 2.57
ARAP1-214ENST00000541623 DNAJC5BQ9UF47 199 aa30.52■■■□□ 2.48
ARAP1-214ENST00000541623 EIF4G1Q04637 1599 aaKnown RBP30.4■■■□□ 2.46
ARAP1-214ENST00000541623 CC2D2AQ9P2K1 1620 aa30.22■■■□□ 2.43
ARAP1-214ENST00000541623 CECR2Q9BXF3 1484 aa30.06■■■□□ 2.4
ARAP1-214ENST00000541623 BAZ1AQ9NRL2 1556 aaPredicted RBP29.96■■■□□ 2.39
ARAP1-214ENST00000541623 SMARCA4P51532 1647 aa29.9■■■□□ 2.38
ARAP1-214ENST00000541623 SMARCA2P51531 1590 aa29.79■■■□□ 2.36
ARAP1-214ENST00000541623 NCAPD3P42695 1498 aa29.79■■■□□ 2.36
ARAP1-214ENST00000541623 ATAD2BQ9ULI0 1458 aa29.75■■■□□ 2.35
ARAP1-214ENST00000541623 MROH2BQ7Z745 1585 aa29.69■■■□□ 2.34
ARAP1-214ENST00000541623 PEG3Q9GZU2 1588 aa29.67■■■□□ 2.34
ARAP1-214ENST00000541623 HMGXB3Q12766 1538 aa29.62■■■□□ 2.33
ARAP1-214ENST00000541623 BAZ1BQ9UIG0 1483 aaKnown RBP29.54■■■□□ 2.32
ARAP1-214ENST00000541623 RSF1Q96T23 1441 aaPredicted RBP29.44■■■□□ 2.3
ARAP1-214ENST00000541623 WIZO95785 1651 aa29.33■■■□□ 2.29
ARAP1-214ENST00000541623 TOP2AP11388 1531 aaKnown RBP29.13■■■□□ 2.25
ARAP1-214ENST00000541623 LAMC3Q9Y6N6 1575 aa28.96■■■□□ 2.23
ARAP1-214ENST00000541623 CADPSQ9ULU8 1353 aa28.92■■■□□ 2.22
ARAP1-214ENST00000541623 NESP48681 1621 aa28.88■■■□□ 2.21
ARAP1-214ENST00000541623 ERCC6Q03468 1493 aa28.86■■■□□ 2.21
ARAP1-214ENST00000541623 PDS5BQ9NTI5 1447 aa28.83■■■□□ 2.21
ARAP1-214ENST00000541623 CCDC88BA6NC98 1476 aa28.76■■■□□ 2.19
ARAP1-214ENST00000541623 CFTRP13569 1480 aa28.75■■■□□ 2.19
ARAP1-214ENST00000541623 SUPT5HO00267 1087 aaKnown RBP28.73■■■□□ 2.19
ARAP1-214ENST00000541623 CUX2O14529 1486 aa28.58■■■□□ 2.17
ARAP1-214ENST00000541623 FANCD2Q9BXW9 1451 aa28.53■■■□□ 2.16
ARAP1-214ENST00000541623 KIF21AQ7Z4S6 1674 aa28.52■■■□□ 2.16
ARAP1-214ENST00000541623 CEP164Q9UPV0 1460 aa28.52■■■□□ 2.16
ARAP1-214ENST00000541623 MRC2Q9UBG0 1479 aa28.46■■■□□ 2.15
ARAP1-214ENST00000541623 THOC2Q8NI27 1593 aaKnown RBP28.45■■■□□ 2.15
ARAP1-214ENST00000541623 PRDM2Q13029 1718 aa28.43■■■□□ 2.14
ARAP1-214ENST00000541623 WDR62O43379 1518 aa28.33■■■□□ 2.13
ARAP1-214ENST00000541623 ABCC8Q09428 1581 aa28.23■■■□□ 2.11
ARAP1-214ENST00000541623 URB2Q14146 1524 aaKnown RBP28.19■■■□□ 2.1
ARAP1-214ENST00000541623 TOPBP1Q92547 1522 aa28.08■■■□□ 2.08
ARAP1-214ENST00000541623 DNMBPQ6XZF7 1577 aa28.07■■■□□ 2.08
ARAP1-214ENST00000541623 IFT140Q96RY7 1462 aa27.95■■■□□ 2.06
ARAP1-214ENST00000541623 CUX1P39880 1505 aa27.86■■■□□ 2.05
ARAP1-214ENST00000541623 POLA1P09884 1462 aaPredicted RBP27.83■■■□□ 2.05
ARAP1-214ENST00000541623 WRNQ14191 1432 aaPredicted RBP eCLIP27.79■■■□□ 2.04
ARAP1-214ENST00000541623 FGD5Q6ZNL6 1462 aa27.77■■■□□ 2.04
ARAP1-214ENST00000541623 SOGA1O94964 1423 aa27.77■■■□□ 2.04
ARAP1-214ENST00000541623 TARBP1Q13395 1621 aaKnown RBP27.74■■■□□ 2.03
ARAP1-214ENST00000541623 ZNF608Q9ULD9 1512 aaPredicted RBP27.68■■■□□ 2.02
ARAP1-214ENST00000541623 TOP2BQ02880 1626 aa27.68■■■□□ 2.02
ARAP1-214ENST00000541623 RAD54L2Q9Y4B4 1467 aa27.66■■■□□ 2.02
ARAP1-214ENST00000541623 WDR97A6NE52 1622 aa27.66■■■□□ 2.02
ARAP1-214ENST00000541623 BIVM-ERCC5R4GMW8 1640 aa27.66■■■□□ 2.02
ARAP1-214ENST00000541623 SYNJ1O43426 1573 aa27.6■■■□□ 2.01
ARAP1-214ENST00000541623 EIF4G3O43432 1585 aaKnown RBP27.59■■■□□ 2.01
ARAP1-214ENST00000541623 DNAJC5Q9H3Z4 198 aa27.58■■■□□ 2.01
ARAP1-214ENST00000541623 AQRO60306 1485 aaKnown RBP eCLIP27.57■■■□□ 2
ARAP1-214ENST00000541623 ABCA10Q8WWZ4 1543 aa27.57■■■□□ 2
ARAP1-214ENST00000541623 TDRD9Q8NDG6 1382 aaKnown RBP27.56■■■□□ 2
ARAP1-214ENST00000541623 GRIN2BQ13224 1484 aa27.46■■□□□ 1.99
ARAP1-214ENST00000541623 GAPVD1Q14C86 1478 aa27.45■■□□□ 1.99
ARAP1-214ENST00000541623 OSCARQ8IYS5 282 aa27.44■■□□□ 1.98
ARAP1-214ENST00000541623 MAGI1Q96QZ7 1491 aaPredicted RBP27.38■■□□□ 1.97
ARAP1-214ENST00000541623 ABCA5Q8WWZ7 1642 aa27.38■■□□□ 1.97
ARAP1-214ENST00000541623 SNAPC4Q5SXM2 1469 aa27.33■■□□□ 1.97
ARAP1-214ENST00000541623 FBLN2P98095 1184 aa27.28■■□□□ 1.96
ARAP1-214ENST00000541623 CHMP7Q8WUX9 453 aaPredicted RBP27.28■■□□□ 1.96
ARAP1-214ENST00000541623 PBRM1Q86U86 1689 aa27.27■■□□□ 1.96
ARAP1-214ENST00000541623 ERICH3Q5RHP9 1530 aa27.26■■□□□ 1.95
ARAP1-214ENST00000541623 SYNJ2O15056 1496 aa27.25■■□□□ 1.95
ARAP1-214ENST00000541623 KIF27Q86VH2 1401 aa27.25■■□□□ 1.95
ARAP1-214ENST00000541623 TRIM41Q8WV44 630 aa27.23■■□□□ 1.95
ARAP1-214ENST00000541623 CHD1O14646 1710 aa27.18■■□□□ 1.94
ARAP1-214ENST00000541623 FHAD1B1AJZ9 1412 aa27.17■■□□□ 1.94
ARAP1-214ENST00000541623 ADAMTS12P58397 1594 aa27.11■■□□□ 1.93
ARAP1-214ENST00000541623 IGF1RP08069 1367 aa27.08■■□□□ 1.93
ARAP1-214ENST00000541623 GRIN2AQ12879 1464 aa27.06■■□□□ 1.92
ARAP1-214ENST00000541623 CUL7Q14999 1698 aa27■■□□□ 1.91
ARAP1-214ENST00000541623 CLASP1Q7Z460 1538 aa26.96■■□□□ 1.91
ARAP1-214ENST00000541623 NUP160Q12769 1436 aa26.96■■□□□ 1.91
ARAP1-214ENST00000541623 CARMIL1Q5VZK9 1371 aa26.94■■□□□ 1.9
ARAP1-214ENST00000541623 CHIC1Q5VXU3 224 aa26.89■■□□□ 1.9
ARAP1-214ENST00000541623 ARHGEF11O15085 1522 aa26.87■■□□□ 1.89
ARAP1-214ENST00000541623 CEP170Q5SW79 1584 aa26.85■■□□□ 1.89
ARAP1-214ENST00000541623 EEA1Q15075 1411 aa26.84■■□□□ 1.89
ARAP1-214ENST00000541623 RUSC2Q8N2Y8 1516 aa26.84■■□□□ 1.89
ARAP1-214ENST00000541623 RIMBP3CA6NJZ7 1639 aa26.82■■□□□ 1.88
ARAP1-214ENST00000541623 RIMBP3BA6NNM3 1639 aa26.82■■□□□ 1.88
ARAP1-214ENST00000541623 RIMBP3Q9UFD9 1639 aa26.82■■□□□ 1.88
ARAP1-214ENST00000541623 RAPGEF2Q9Y4G8 1499 aa26.79■■□□□ 1.88
ARAP1-214ENST00000541623 KIAA0586Q9BVV6 1533 aa26.75■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 129.8 ms