RNA–Protein interactions for RNA: ENST00000567621.5

FANCA-225, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-225ENST00000567621 NISCHQ9Y2I1 1504 aa24.27■■□□□ 1.48
FANCA-225ENST00000567621 CCDC180Q9P1Z9 1646 aa21.76■■□□□ 1.07
FANCA-225ENST00000567621 ABCC9O60706 1549 aa21.08■□□□□ 0.96
FANCA-225ENST00000567621 RB1CC1Q8TDY2 1594 aa20.39■□□□□ 0.85
FANCA-225ENST00000567621 NACADO15069 1562 aa20.35■□□□□ 0.85
FANCA-225ENST00000567621 MYO15BQ96JP2 1530 aa20.24■□□□□ 0.83
FANCA-225ENST00000567621 ZCCHC6Q5VYS8 1495 aaKnown RBP20.23■□□□□ 0.83
FANCA-225ENST00000567621 DCAF1Q9Y4B6 1507 aa20.14■□□□□ 0.81
FANCA-225ENST00000567621 DCAF8L2P0C7V8 631 aa20.09■□□□□ 0.81
FANCA-225ENST00000567621 UNC13AQ9UPW8 1703 aa20.08■□□□□ 0.81
FANCA-225ENST00000567621 BICRAQ9NZM4 1560 aa19.75■□□□□ 0.75
FANCA-225ENST00000567621 SCRIBQ14160 1630 aa19.72■□□□□ 0.75
FANCA-225ENST00000567621 SHROOM4Q9ULL8 1493 aa19.6■□□□□ 0.73
FANCA-225ENST00000567621 PABPN1Q86U42 306 aaKnown RBP eCLIP19.58■□□□□ 0.721e-7■□□□□ 9.5
FANCA-225ENST00000567621 DNAJC5BQ9UF47 199 aa19.26■□□□□ 0.67
FANCA-225ENST00000567621 EIF4G1Q04637 1599 aaKnown RBP19.23■□□□□ 0.67
FANCA-225ENST00000567621 CC2D2AQ9P2K1 1620 aa19.17■□□□□ 0.66
FANCA-225ENST00000567621 CECR2Q9BXF3 1484 aa18.96■□□□□ 0.63
FANCA-225ENST00000567621 SMARCA4P51532 1647 aa18.89■□□□□ 0.62
FANCA-225ENST00000567621 BAZ1AQ9NRL2 1556 aaPredicted RBP18.85■□□□□ 0.61
FANCA-225ENST00000567621 SMARCA2P51531 1590 aa18.76■□□□□ 0.59
FANCA-225ENST00000567621 PEG3Q9GZU2 1588 aa18.73■□□□□ 0.59
FANCA-225ENST00000567621 NCAPD3P42695 1498 aa18.71■□□□□ 0.59
FANCA-225ENST00000567621 ATAD2BQ9ULI0 1458 aa18.71■□□□□ 0.59
FANCA-225ENST00000567621 HMGXB3Q12766 1538 aa18.7■□□□□ 0.58
FANCA-225ENST00000567621 MROH2BQ7Z745 1585 aa18.68■□□□□ 0.58
FANCA-225ENST00000567621 BAZ1BQ9UIG0 1483 aaKnown RBP18.58■□□□□ 0.56
FANCA-225ENST00000567621 WIZO95785 1651 aa18.54■□□□□ 0.56
FANCA-225ENST00000567621 RSF1Q96T23 1441 aaPredicted RBP18.42■□□□□ 0.54
FANCA-225ENST00000567621 TOP2AP11388 1531 aaKnown RBP18.33■□□□□ 0.53
FANCA-225ENST00000567621 LAMC3Q9Y6N6 1575 aa18.31■□□□□ 0.52
FANCA-225ENST00000567621 NESP48681 1621 aa18.24■□□□□ 0.51
FANCA-225ENST00000567621 KIF21AQ7Z4S6 1674 aa18.2■□□□□ 0.5
FANCA-225ENST00000567621 PRDM2Q13029 1718 aa18.2■□□□□ 0.5
FANCA-225ENST00000567621 ERCC6Q03468 1493 aa18.19■□□□□ 0.5
FANCA-225ENST00000567621 CADPSQ9ULU8 1353 aa18.12■□□□□ 0.49
FANCA-225ENST00000567621 THOC2Q8NI27 1593 aaKnown RBP18.09■□□□□ 0.49
FANCA-225ENST00000567621 PDS5BQ9NTI5 1447 aa18.08■□□□□ 0.49
FANCA-225ENST00000567621 CUX2O14529 1486 aa18.06■□□□□ 0.48
FANCA-225ENST00000567621 CFTRP13569 1480 aa18.05■□□□□ 0.48
FANCA-225ENST00000567621 CCDC88BA6NC98 1476 aa18.04■□□□□ 0.48
FANCA-225ENST00000567621 CEP164Q9UPV0 1460 aa17.95■□□□□ 0.46
FANCA-225ENST00000567621 FANCD2Q9BXW9 1451 aa17.95■□□□□ 0.46
FANCA-225ENST00000567621 MRC2Q9UBG0 1479 aa17.93■□□□□ 0.46
FANCA-225ENST00000567621 WDR62O43379 1518 aa17.92■□□□□ 0.46
FANCA-225ENST00000567621 SUPT5HO00267 1087 aaKnown RBP17.83■□□□□ 0.44
FANCA-225ENST00000567621 URB2Q14146 1524 aaKnown RBP17.78■□□□□ 0.44
FANCA-225ENST00000567621 ABCC8Q09428 1581 aa17.71■□□□□ 0.43
FANCA-225ENST00000567621 DNMBPQ6XZF7 1577 aa17.71■□□□□ 0.43
FANCA-225ENST00000567621 TOPBP1Q92547 1522 aa17.68■□□□□ 0.42
FANCA-225ENST00000567621 IFT140Q96RY7 1462 aa17.56■□□□□ 0.4
FANCA-225ENST00000567621 TARBP1Q13395 1621 aaKnown RBP17.56■□□□□ 0.4
FANCA-225ENST00000567621 CUX1P39880 1505 aa17.54■□□□□ 0.4
FANCA-225ENST00000567621 POLA1P09884 1462 aaPredicted RBP17.51■□□□□ 0.39
FANCA-225ENST00000567621 EIF4G3O43432 1585 aaKnown RBP17.51■□□□□ 0.39
FANCA-225ENST00000567621 BIVM-ERCC5R4GMW8 1640 aa17.5■□□□□ 0.39
FANCA-225ENST00000567621 WDR97A6NE52 1622 aa17.49■□□□□ 0.39
FANCA-225ENST00000567621 FGD5Q6ZNL6 1462 aa17.47■□□□□ 0.39
FANCA-225ENST00000567621 ZNF608Q9ULD9 1512 aaPredicted RBP17.46■□□□□ 0.39
FANCA-225ENST00000567621 TOP2BQ02880 1626 aa17.45■□□□□ 0.38
FANCA-225ENST00000567621 SYNJ1O43426 1573 aa17.41■□□□□ 0.38
FANCA-225ENST00000567621 DNAJC5Q9H3Z4 198 aa17.4■□□□□ 0.38
FANCA-225ENST00000567621 SOGA1O94964 1423 aa17.39■□□□□ 0.38
FANCA-225ENST00000567621 RAD54L2Q9Y4B4 1467 aa17.39■□□□□ 0.37
FANCA-225ENST00000567621 WRNQ14191 1432 aaPredicted RBP eCLIP17.38■□□□□ 0.37
FANCA-225ENST00000567621 PBRM1Q86U86 1689 aa17.38■□□□□ 0.37
FANCA-225ENST00000567621 CHD1O14646 1710 aa17.35■□□□□ 0.37
FANCA-225ENST00000567621 ABCA5Q8WWZ7 1642 aa17.33■□□□□ 0.37
FANCA-225ENST00000567621 AQRO60306 1485 aaKnown RBP eCLIP17.32■□□□□ 0.369e-7■■■■□ 23.8
FANCA-225ENST00000567621 ABCA10Q8WWZ4 1543 aa17.31■□□□□ 0.36
FANCA-225ENST00000567621 TDRD9Q8NDG6 1382 aaKnown RBP17.27■□□□□ 0.35
FANCA-225ENST00000567621 GRIN2BQ13224 1484 aa17.24■□□□□ 0.35
FANCA-225ENST00000567621 GAPVD1Q14C86 1478 aa17.24■□□□□ 0.35
FANCA-225ENST00000567621 MAGI1Q96QZ7 1491 aaPredicted RBP17.24■□□□□ 0.35
FANCA-225ENST00000567621 SNAPC4Q5SXM2 1469 aa17.21■□□□□ 0.35
FANCA-225ENST00000567621 OSCARQ8IYS5 282 aa17.19■□□□□ 0.34
FANCA-225ENST00000567621 SYNJ2O15056 1496 aa17.15■□□□□ 0.34
FANCA-225ENST00000567621 ERICH3Q5RHP9 1530 aa17.15■□□□□ 0.34
FANCA-225ENST00000567621 ADAMTS12P58397 1594 aa17.15■□□□□ 0.34
FANCA-225ENST00000567621 CLASP1Q7Z460 1538 aa17.07■□□□□ 0.32
FANCA-225ENST00000567621 CUL7Q14999 1698 aa17.07■□□□□ 0.32
FANCA-225ENST00000567621 RIMBP3CA6NJZ7 1639 aa17.07■□□□□ 0.32
FANCA-225ENST00000567621 RIMBP3BA6NNM3 1639 aa17.07■□□□□ 0.32
FANCA-225ENST00000567621 RIMBP3Q9UFD9 1639 aa17.07■□□□□ 0.32
FANCA-225ENST00000567621 FBLN2P98095 1184 aa17.06■□□□□ 0.32
FANCA-225ENST00000567621 CHMP7Q8WUX9 453 aaPredicted RBP17.04■□□□□ 0.32
FANCA-225ENST00000567621 GRIN2AQ12879 1464 aa17.04■□□□□ 0.32
FANCA-225ENST00000567621 FHAD1B1AJZ9 1412 aa17.03■□□□□ 0.32
FANCA-225ENST00000567621 KIF27Q86VH2 1401 aa17.02■□□□□ 0.31
FANCA-225ENST00000567621 ARHGEF11O15085 1522 aa17.01■□□□□ 0.31
FANCA-225ENST00000567621 CEP170Q5SW79 1584 aa16.98■□□□□ 0.31
FANCA-225ENST00000567621 NUP160Q12769 1436 aa16.94■□□□□ 0.3
FANCA-225ENST00000567621 SHROOM2Q13796 1616 aa16.93■□□□□ 0.3
FANCA-225ENST00000567621 RUSC2Q8N2Y8 1516 aa16.91■□□□□ 0.3
FANCA-225ENST00000567621 IGF1RP08069 1367 aa16.9■□□□□ 0.3
FANCA-225ENST00000567621 TRIM41Q8WV44 630 aa16.88■□□□□ 0.29
FANCA-225ENST00000567621 ARAP1Q96P48 1450 aa16.84■□□□□ 0.29
FANCA-225ENST00000567621 CTTNBP2Q8WZ74 1663 aa16.81■□□□□ 0.28
FANCA-225ENST00000567621 CARMIL1Q5VZK9 1371 aa16.81■□□□□ 0.28
FANCA-225ENST00000567621 ERCC6L2Q5T890 1561 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms