RNA–Protein interactions for RNA: ENST00000525155.5

CHKA-203, Transcript of choline kinase alpha, humanhuman

TSL 5

Gene CHKA, Length 1,201 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-203ENST00000525155 NISCHQ9Y2I1 1504 aa30.22■■■□□ 2.43
CHKA-203ENST00000525155 ABCC9O60706 1549 aa27.1■■□□□ 1.93
CHKA-203ENST00000525155 CCDC180Q9P1Z9 1646 aa26.87■■□□□ 1.89
CHKA-203ENST00000525155 DNAJC5BQ9UF47 199 aa25.64■■□□□ 1.7
CHKA-203ENST00000525155 RB1CC1Q8TDY2 1594 aa25.64■■□□□ 1.69
CHKA-203ENST00000525155 DCAF8L2P0C7V8 631 aa25.6■■□□□ 1.69
CHKA-203ENST00000525155 NACADO15069 1562 aa25.52■■□□□ 1.68
CHKA-203ENST00000525155 PABPN1Q86U42 306 aaKnown RBP eCLIP25.37■■□□□ 1.657e-8■□□□□ 9.5
CHKA-203ENST00000525155 MYO15BQ96JP2 1530 aa25.21■■□□□ 1.63
CHKA-203ENST00000525155 BICRAQ9NZM4 1560 aa25.05■■□□□ 1.6
CHKA-203ENST00000525155 ZCCHC6Q5VYS8 1495 aaKnown RBP25.03■■□□□ 1.6
CHKA-203ENST00000525155 UNC13AQ9UPW8 1703 aa25.01■■□□□ 1.59
CHKA-203ENST00000525155 DCAF1Q9Y4B6 1507 aa24.91■■□□□ 1.58
CHKA-203ENST00000525155 SCRIBQ14160 1630 aa24.61■■□□□ 1.53
CHKA-203ENST00000525155 SHROOM4Q9ULL8 1493 aa24.53■■□□□ 1.52
CHKA-203ENST00000525155 CC2D2AQ9P2K1 1620 aa24.39■■□□□ 1.5
CHKA-203ENST00000525155 CECR2Q9BXF3 1484 aa24.38■■□□□ 1.49
CHKA-203ENST00000525155 EIF4G1Q04637 1599 aaKnown RBP24.36■■□□□ 1.49
CHKA-203ENST00000525155 NCAPD3P42695 1498 aa23.68■■□□□ 1.38
CHKA-203ENST00000525155 ATAD2BQ9ULI0 1458 aa23.62■■□□□ 1.37
CHKA-203ENST00000525155 SMARCA4P51532 1647 aa23.48■■□□□ 1.35
CHKA-203ENST00000525155 SMARCA2P51531 1590 aa23.4■■□□□ 1.34
CHKA-203ENST00000525155 DNAJC5Q9H3Z4 198 aa23.39■■□□□ 1.33
CHKA-203ENST00000525155 HMGXB3Q12766 1538 aa23.38■■□□□ 1.33
CHKA-203ENST00000525155 BAZ1AQ9NRL2 1556 aaPredicted RBP23.35■■□□□ 1.33
CHKA-203ENST00000525155 MROH2BQ7Z745 1585 aa23.34■■□□□ 1.33
CHKA-203ENST00000525155 NESP48681 1621 aa23.33■■□□□ 1.33
CHKA-203ENST00000525155 BAZ1BQ9UIG0 1483 aaKnown RBP23.29■■□□□ 1.32
CHKA-203ENST00000525155 ERCC6Q03468 1493 aa23.28■■□□□ 1.32
CHKA-203ENST00000525155 PEG3Q9GZU2 1588 aa23.27■■□□□ 1.32
CHKA-203ENST00000525155 CUX2O14529 1486 aa23.24■■□□□ 1.31
CHKA-203ENST00000525155 LAMC3Q9Y6N6 1575 aa22.99■■□□□ 1.27
CHKA-203ENST00000525155 CADPSQ9ULU8 1353 aa22.99■■□□□ 1.27
CHKA-203ENST00000525155 WIZO95785 1651 aa22.97■■□□□ 1.27
CHKA-203ENST00000525155 PDS5BQ9NTI5 1447 aa22.93■■□□□ 1.26
CHKA-203ENST00000525155 THOC2Q8NI27 1593 aaKnown RBP22.93■■□□□ 1.26
CHKA-203ENST00000525155 RSF1Q96T23 1441 aaPredicted RBP22.91■■□□□ 1.26
CHKA-203ENST00000525155 KIF21AQ7Z4S6 1674 aa22.82■■□□□ 1.24
CHKA-203ENST00000525155 MRC2Q9UBG0 1479 aa22.73■■□□□ 1.23
CHKA-203ENST00000525155 CFTRP13569 1480 aa22.71■■□□□ 1.23
CHKA-203ENST00000525155 WDR62O43379 1518 aa22.66■■□□□ 1.22
CHKA-203ENST00000525155 FANCD2Q9BXW9 1451 aa22.66■■□□□ 1.22
CHKA-203ENST00000525155 TOP2AP11388 1531 aaKnown RBP22.65■■□□□ 1.22
CHKA-203ENST00000525155 CEP164Q9UPV0 1460 aa22.61■■□□□ 1.21
CHKA-203ENST00000525155 CCDC88BA6NC98 1476 aa22.53■■□□□ 1.2
CHKA-203ENST00000525155 URB2Q14146 1524 aaKnown RBP22.51■■□□□ 1.19
CHKA-203ENST00000525155 OSCARQ8IYS5 282 aa22.32■■□□□ 1.16
CHKA-203ENST00000525155 TRIM41Q8WV44 630 aa22.32■■□□□ 1.16
CHKA-203ENST00000525155 ZNF608Q9ULD9 1512 aaPredicted RBP22.26■■□□□ 1.15
CHKA-203ENST00000525155 TOPBP1Q92547 1522 aa22.23■■□□□ 1.15
CHKA-203ENST00000525155 IFT140Q96RY7 1462 aa22.19■■□□□ 1.14
CHKA-203ENST00000525155 PRDM2Q13029 1718 aa22.14■■□□□ 1.14
CHKA-203ENST00000525155 ABCC8Q09428 1581 aa22.1■■□□□ 1.13
CHKA-203ENST00000525155 AQRO60306 1485 aaKnown RBP eCLIP22.08■■□□□ 1.125e-7■■■■□ 25.6
CHKA-203ENST00000525155 DNMBPQ6XZF7 1577 aa22.08■■□□□ 1.12
CHKA-203ENST00000525155 POLA1P09884 1462 aaPredicted RBP22.03■■□□□ 1.12
CHKA-203ENST00000525155 TARBP1Q13395 1621 aaKnown RBP22.01■■□□□ 1.11
CHKA-203ENST00000525155 RAD54L2Q9Y4B4 1467 aa22.01■■□□□ 1.11
CHKA-203ENST00000525155 TDRD9Q8NDG6 1382 aaKnown RBP21.97■■□□□ 1.11
CHKA-203ENST00000525155 SOGA1O94964 1423 aa21.96■■□□□ 1.11
CHKA-203ENST00000525155 EIF4G3O43432 1585 aaKnown RBP21.95■■□□□ 1.11
CHKA-203ENST00000525155 SUPT5HO00267 1087 aaKnown RBP21.94■■□□□ 1.1
CHKA-203ENST00000525155 CUX1P39880 1505 aa21.9■■□□□ 1.1
CHKA-203ENST00000525155 FBLN2P98095 1184 aa21.89■■□□□ 1.09
CHKA-203ENST00000525155 RIMBP3CA6NJZ7 1639 aa21.88■■□□□ 1.09
CHKA-203ENST00000525155 RIMBP3BA6NNM3 1639 aa21.88■■□□□ 1.09
CHKA-203ENST00000525155 RIMBP3Q9UFD9 1639 aa21.88■■□□□ 1.09
CHKA-203ENST00000525155 ARHGEF11O15085 1522 aa21.87■■□□□ 1.09
CHKA-203ENST00000525155 FGD5Q6ZNL6 1462 aa21.87■■□□□ 1.09
CHKA-203ENST00000525155 CYB5RLQ6IPT4 315 aa21.84■■□□□ 1.09
CHKA-203ENST00000525155 SNAPC4Q5SXM2 1469 aa21.76■■□□□ 1.07
CHKA-203ENST00000525155 CHD1O14646 1710 aa21.74■■□□□ 1.07
CHKA-203ENST00000525155 CHMP7Q8WUX9 453 aaPredicted RBP21.73■■□□□ 1.07
CHKA-203ENST00000525155 ARAP1Q96P48 1450 aa21.71■■□□□ 1.07
CHKA-203ENST00000525155 GRIN2BQ13224 1484 aa21.7■■□□□ 1.06
CHKA-203ENST00000525155 MAGI1Q96QZ7 1491 aaPredicted RBP21.65■■□□□ 1.06
CHKA-203ENST00000525155 GAPVD1Q14C86 1478 aa21.64■■□□□ 1.06
CHKA-203ENST00000525155 WDR97A6NE52 1622 aa21.63■■□□□ 1.05
CHKA-203ENST00000525155 ABCA10Q8WWZ4 1543 aa21.63■■□□□ 1.05
CHKA-203ENST00000525155 CLASP1Q7Z460 1538 aa21.62■■□□□ 1.05
CHKA-203ENST00000525155 SYNJ2O15056 1496 aa21.61■■□□□ 1.05
CHKA-203ENST00000525155 WRNQ14191 1432 aaPredicted RBP eCLIP21.55■■□□□ 1.04
CHKA-203ENST00000525155 ABCA5Q8WWZ7 1642 aa21.51■■□□□ 1.03
CHKA-203ENST00000525155 SYNJ1O43426 1573 aa21.5■■□□□ 1.03
CHKA-203ENST00000525155 TRHP20396 242 aaPredicted RBP21.49■■□□□ 1.03
CHKA-203ENST00000525155 TOP2BQ02880 1626 aa21.46■■□□□ 1.03
CHKA-203ENST00000525155 PBRM1Q86U86 1689 aa21.44■■□□□ 1.02
CHKA-203ENST00000525155 BIVM-ERCC5R4GMW8 1640 aa21.41■■□□□ 1.02
CHKA-203ENST00000525155 GRIN2AQ12879 1464 aa21.41■■□□□ 1.02
CHKA-203ENST00000525155 NUP160Q12769 1436 aa21.4■■□□□ 1.02
CHKA-203ENST00000525155 ERCC6L2Q5T890 1561 aa21.38■■□□□ 1.01
CHKA-203ENST00000525155 FHAD1B1AJZ9 1412 aa21.37■■□□□ 1.01
CHKA-203ENST00000525155 ADAMTS12P58397 1594 aa21.34■■□□□ 1.01
CHKA-203ENST00000525155 CEP170Q5SW79 1584 aa21.34■■□□□ 1.01
CHKA-203ENST00000525155 ERICH3Q5RHP9 1530 aa21.29■■□□□ 1
CHKA-203ENST00000525155 JPH4Q96JJ6 628 aa21.26■□□□□ 0.99
CHKA-203ENST00000525155 IGF1RP08069 1367 aa21.23■□□□□ 0.99
CHKA-203ENST00000525155 PRG4Q92954 1404 aaPredicted RBP21.19■□□□□ 0.98
CHKA-203ENST00000525155 SHROOM2Q13796 1616 aa21.18■□□□□ 0.98
CHKA-203ENST00000525155 KIF27Q86VH2 1401 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms