RNA–Protein interactions for RNA: ENST00000542612.1

ARAP1-217, Transcript of ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1, humanhuman

TSL 5

Gene ARAP1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARAP1-217ENST00000542612 NISCHQ9Y2I1 1504 aa35.18■■■■□ 3.22
ARAP1-217ENST00000542612 CCDC180Q9P1Z9 1646 aa31.39■■■□□ 2.62
ARAP1-217ENST00000542612 ABCC9O60706 1549 aa31.14■■■□□ 2.57
ARAP1-217ENST00000542612 RB1CC1Q8TDY2 1594 aa29.62■■■□□ 2.33
ARAP1-217ENST00000542612 NACADO15069 1562 aa29.56■■■□□ 2.32
ARAP1-217ENST00000542612 DCAF8L2P0C7V8 631 aa29.45■■■□□ 2.31
ARAP1-217ENST00000542612 DNAJC5BQ9UF47 199 aa29.39■■■□□ 2.3
ARAP1-217ENST00000542612 MYO15BQ96JP2 1530 aa29.36■■■□□ 2.29
ARAP1-217ENST00000542612 ZCCHC6Q5VYS8 1495 aaKnown RBP29.25■■■□□ 2.27
ARAP1-217ENST00000542612 DCAF1Q9Y4B6 1507 aa29.16■■■□□ 2.26
ARAP1-217ENST00000542612 PABPN1Q86U42 306 aaKnown RBP eCLIP28.93■■■□□ 2.223e-6■□□□□ 9.3
ARAP1-217ENST00000542612 UNC13AQ9UPW8 1703 aa28.92■■■□□ 2.22
ARAP1-217ENST00000542612 BICRAQ9NZM4 1560 aa28.68■■■□□ 2.18
ARAP1-217ENST00000542612 SCRIBQ14160 1630 aa28.54■■■□□ 2.16
ARAP1-217ENST00000542612 SHROOM4Q9ULL8 1493 aa28.46■■■□□ 2.15
ARAP1-217ENST00000542612 CC2D2AQ9P2K1 1620 aa28.14■■■□□ 2.1
ARAP1-217ENST00000542612 CECR2Q9BXF3 1484 aa28.1■■■□□ 2.09
ARAP1-217ENST00000542612 EIF4G1Q04637 1599 aaKnown RBP28.02■■■□□ 2.08
ARAP1-217ENST00000542612 SMARCA4P51532 1647 aa27.32■■□□□ 1.96
ARAP1-217ENST00000542612 BAZ1AQ9NRL2 1556 aaPredicted RBP27.31■■□□□ 1.96
ARAP1-217ENST00000542612 NCAPD3P42695 1498 aa27.26■■□□□ 1.95
ARAP1-217ENST00000542612 DNAJC5Q9H3Z4 198 aa27.25■■□□□ 1.95
ARAP1-217ENST00000542612 SMARCA2P51531 1590 aa27.22■■□□□ 1.95
ARAP1-217ENST00000542612 ATAD2BQ9ULI0 1458 aa27.22■■□□□ 1.95
ARAP1-217ENST00000542612 HMGXB3Q12766 1538 aa27.11■■□□□ 1.93
ARAP1-217ENST00000542612 PEG3Q9GZU2 1588 aa27.09■■□□□ 1.93
ARAP1-217ENST00000542612 MROH2BQ7Z745 1585 aa27.07■■□□□ 1.92
ARAP1-217ENST00000542612 CUX2O14529 1486 aa27■■□□□ 1.91
ARAP1-217ENST00000542612 BAZ1BQ9UIG0 1483 aaKnown RBP26.99■■□□□ 1.91
ARAP1-217ENST00000542612 ERCC6Q03468 1493 aa26.94■■□□□ 1.9
ARAP1-217ENST00000542612 WIZO95785 1651 aa26.78■■□□□ 1.88
ARAP1-217ENST00000542612 RSF1Q96T23 1441 aaPredicted RBP26.73■■□□□ 1.87
ARAP1-217ENST00000542612 NESP48681 1621 aa26.66■■□□□ 1.86
ARAP1-217ENST00000542612 LAMC3Q9Y6N6 1575 aa26.58■■□□□ 1.85
ARAP1-217ENST00000542612 TOP2AP11388 1531 aaKnown RBP26.51■■□□□ 1.83
ARAP1-217ENST00000542612 THOC2Q8NI27 1593 aaKnown RBP26.48■■□□□ 1.83
ARAP1-217ENST00000542612 CADPSQ9ULU8 1353 aa26.46■■□□□ 1.83
ARAP1-217ENST00000542612 PDS5BQ9NTI5 1447 aa26.42■■□□□ 1.82
ARAP1-217ENST00000542612 KIF21AQ7Z4S6 1674 aa26.36■■□□□ 1.81
ARAP1-217ENST00000542612 CFTRP13569 1480 aa26.25■■□□□ 1.79
ARAP1-217ENST00000542612 CCDC88BA6NC98 1476 aa26.19■■□□□ 1.78
ARAP1-217ENST00000542612 MRC2Q9UBG0 1479 aa26.13■■□□□ 1.77
ARAP1-217ENST00000542612 FANCD2Q9BXW9 1451 aa26.12■■□□□ 1.77
ARAP1-217ENST00000542612 CEP164Q9UPV0 1460 aa26.11■■□□□ 1.77
ARAP1-217ENST00000542612 WDR62O43379 1518 aa26.08■■□□□ 1.77
ARAP1-217ENST00000542612 PRDM2Q13029 1718 aa26.08■■□□□ 1.76
ARAP1-217ENST00000542612 TRIM41Q8WV44 630 aa25.92■■□□□ 1.74
ARAP1-217ENST00000542612 SUPT5HO00267 1087 aaKnown RBP25.91■■□□□ 1.74
ARAP1-217ENST00000542612 URB2Q14146 1524 aaKnown RBP25.84■■□□□ 1.73
ARAP1-217ENST00000542612 ABCC8Q09428 1581 aa25.78■■□□□ 1.72
ARAP1-217ENST00000542612 OSCARQ8IYS5 282 aa25.71■■□□□ 1.71
ARAP1-217ENST00000542612 TOPBP1Q92547 1522 aa25.68■■□□□ 1.7
ARAP1-217ENST00000542612 DNMBPQ6XZF7 1577 aa25.65■■□□□ 1.7
ARAP1-217ENST00000542612 IFT140Q96RY7 1462 aa25.6■■□□□ 1.69
ARAP1-217ENST00000542612 POLA1P09884 1462 aaPredicted RBP25.45■■□□□ 1.66
ARAP1-217ENST00000542612 ZNF608Q9ULD9 1512 aaPredicted RBP25.42■■□□□ 1.66
ARAP1-217ENST00000542612 TARBP1Q13395 1621 aaKnown RBP25.41■■□□□ 1.66
ARAP1-217ENST00000542612 CUX1P39880 1505 aa25.4■■□□□ 1.66
ARAP1-217ENST00000542612 RIMBP3CA6NJZ7 1639 aa25.4■■□□□ 1.66
ARAP1-217ENST00000542612 RIMBP3BA6NNM3 1639 aa25.4■■□□□ 1.66
ARAP1-217ENST00000542612 RIMBP3Q9UFD9 1639 aa25.4■■□□□ 1.66
ARAP1-217ENST00000542612 SOGA1O94964 1423 aa25.37■■□□□ 1.65
ARAP1-217ENST00000542612 FGD5Q6ZNL6 1462 aa25.35■■□□□ 1.65
ARAP1-217ENST00000542612 EIF4G3O43432 1585 aaKnown RBP25.33■■□□□ 1.65
ARAP1-217ENST00000542612 RAD54L2Q9Y4B4 1467 aa25.31■■□□□ 1.64
ARAP1-217ENST00000542612 WDR97A6NE52 1622 aa25.3■■□□□ 1.64
ARAP1-217ENST00000542612 ARHGEF11O15085 1522 aa25.28■■□□□ 1.64
ARAP1-217ENST00000542612 AQRO60306 1485 aaKnown RBP eCLIP25.28■■□□□ 1.64
ARAP1-217ENST00000542612 WRNQ14191 1432 aaPredicted RBP eCLIP25.22■■□□□ 1.63
ARAP1-217ENST00000542612 TDRD9Q8NDG6 1382 aaKnown RBP25.2■■□□□ 1.63
ARAP1-217ENST00000542612 TOP2BQ02880 1626 aa25.19■■□□□ 1.62
ARAP1-217ENST00000542612 BIVM-ERCC5R4GMW8 1640 aa25.19■■□□□ 1.62
ARAP1-217ENST00000542612 CHD1O14646 1710 aa25.17■■□□□ 1.62
ARAP1-217ENST00000542612 ABCA10Q8WWZ4 1543 aa25.14■■□□□ 1.62
ARAP1-217ENST00000542612 SYNJ1O43426 1573 aa25.12■■□□□ 1.61
ARAP1-217ENST00000542612 GRIN2BQ13224 1484 aa25.1■■□□□ 1.61
ARAP1-217ENST00000542612 CYB5RLQ6IPT4 315 aa25.1■■□□□ 1.61
ARAP1-217ENST00000542612 GAPVD1Q14C86 1478 aa25.07■■□□□ 1.6
ARAP1-217ENST00000542612 MAGI1Q96QZ7 1491 aaPredicted RBP25.06■■□□□ 1.6
ARAP1-217ENST00000542612 FBLN2P98095 1184 aa25.05■■□□□ 1.6
ARAP1-217ENST00000542612 SNAPC4Q5SXM2 1469 aa25.04■■□□□ 1.6
ARAP1-217ENST00000542612 ABCA5Q8WWZ7 1642 aa25.03■■□□□ 1.6
ARAP1-217ENST00000542612 PBRM1Q86U86 1689 aa25.02■■□□□ 1.6
ARAP1-217ENST00000542612 ARAP1Q96P48 1450 aa25■■□□□ 1.59
ARAP1-217ENST00000542612 CHMP7Q8WUX9 453 aaPredicted RBP24.98■■□□□ 1.59
ARAP1-217ENST00000542612 SYNJ2O15056 1496 aa24.96■■□□□ 1.59
ARAP1-217ENST00000542612 TRHP20396 242 aaPredicted RBP24.92■■□□□ 1.58
ARAP1-217ENST00000542612 ERICH3Q5RHP9 1530 aa24.86■■□□□ 1.57
ARAP1-217ENST00000542612 CLASP1Q7Z460 1538 aa24.86■■□□□ 1.57
ARAP1-217ENST00000542612 FHAD1B1AJZ9 1412 aa24.79■■□□□ 1.56
ARAP1-217ENST00000542612 ADAMTS12P58397 1594 aa24.79■■□□□ 1.56
ARAP1-217ENST00000542612 GRIN2AQ12879 1464 aa24.76■■□□□ 1.55
ARAP1-217ENST00000542612 KIF27Q86VH2 1401 aa24.74■■□□□ 1.55
ARAP1-217ENST00000542612 NUP160Q12769 1436 aa24.66■■□□□ 1.54
ARAP1-217ENST00000542612 IGF1RP08069 1367 aa24.63■■□□□ 1.53
ARAP1-217ENST00000542612 CEP170Q5SW79 1584 aa24.61■■□□□ 1.53
ARAP1-217ENST00000542612 CUL7Q14999 1698 aa24.6■■□□□ 1.53
ARAP1-217ENST00000542612 CARMIL1Q5VZK9 1371 aa24.5■■□□□ 1.51
ARAP1-217ENST00000542612 SHROOM2Q13796 1616 aa24.5■■□□□ 1.51
ARAP1-217ENST00000542612 JPH4Q96JJ6 628 aa24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 146.4 ms