Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SND1-IT1Q9HBX3 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SND1-IT1Q9HBX3 AC099791.1-201ENST00000416440 715 ntBASIC13.28□□□□□ -0.28
SND1-IT1Q9HBX3 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC13.28□□□□□ -0.28
SND1-IT1Q9HBX3 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC13.28□□□□□ -0.28
SND1-IT1Q9HBX3 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SND1-IT1Q9HBX3 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC13.28□□□□□ -0.28
SND1-IT1Q9HBX3 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SND1-IT1Q9HBX3 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
SND1-IT1Q9HBX3 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SND1-IT1Q9HBX3 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SND1-IT1Q9HBX3 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SND1-IT1Q9HBX3 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC13.28□□□□□ -0.28
SND1-IT1Q9HBX3 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SND1-IT1Q9HBX3 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
SND1-IT1Q9HBX3 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SND1-IT1Q9HBX3 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC13.28□□□□□ -0.28
SND1-IT1Q9HBX3 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SND1-IT1Q9HBX3 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
SND1-IT1Q9HBX3 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC13.28□□□□□ -0.28
SND1-IT1Q9HBX3 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
SND1-IT1Q9HBX3 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
SND1-IT1Q9HBX3 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC13.28□□□□□ -0.28
SND1-IT1Q9HBX3 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
SND1-IT1Q9HBX3 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
SND1-IT1Q9HBX3 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.28
SND1-IT1Q9HBX3 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SND1-IT1Q9HBX3 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SND1-IT1Q9HBX3 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
SND1-IT1Q9HBX3 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC13.27□□□□□ -0.28
SND1-IT1Q9HBX3 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
SND1-IT1Q9HBX3 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC13.27□□□□□ -0.28
SND1-IT1Q9HBX3 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC13.27□□□□□ -0.28
SND1-IT1Q9HBX3 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
SND1-IT1Q9HBX3 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC13.27□□□□□ -0.28
SND1-IT1Q9HBX3 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SND1-IT1Q9HBX3 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC13.27□□□□□ -0.29
SND1-IT1Q9HBX3 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SND1-IT1Q9HBX3 AC245052.3-201ENST00000450182 901 ntBASIC13.27□□□□□ -0.29
SND1-IT1Q9HBX3 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC13.27□□□□□ -0.29
SND1-IT1Q9HBX3 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC13.27□□□□□ -0.29
SND1-IT1Q9HBX3 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC13.27□□□□□ -0.29
SND1-IT1Q9HBX3 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SND1-IT1Q9HBX3 NEFHP1-201ENST00000412845 2629 ntBASIC13.27□□□□□ -0.29
SND1-IT1Q9HBX3 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SND1-IT1Q9HBX3 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SND1-IT1Q9HBX3 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
SND1-IT1Q9HBX3 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC13.27□□□□□ -0.29
SND1-IT1Q9HBX3 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SND1-IT1Q9HBX3 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC13.27□□□□□ -0.29
SND1-IT1Q9HBX3 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SND1-IT1Q9HBX3 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SND1-IT1Q9HBX3 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SND1-IT1Q9HBX3 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC13.27□□□□□ -0.29
SND1-IT1Q9HBX3 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
SND1-IT1Q9HBX3 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SND1-IT1Q9HBX3 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC13.27□□□□□ -0.29
SND1-IT1Q9HBX3 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
SND1-IT1Q9HBX3 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SND1-IT1Q9HBX3 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SND1-IT1Q9HBX3 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SND1-IT1Q9HBX3 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SND1-IT1Q9HBX3 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC13.26□□□□□ -0.29
SND1-IT1Q9HBX3 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SND1-IT1Q9HBX3 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
SND1-IT1Q9HBX3 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
SND1-IT1Q9HBX3 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
SND1-IT1Q9HBX3 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
SND1-IT1Q9HBX3 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
SND1-IT1Q9HBX3 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SND1-IT1Q9HBX3 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC13.26□□□□□ -0.29
SND1-IT1Q9HBX3 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SND1-IT1Q9HBX3 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SND1-IT1Q9HBX3 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SND1-IT1Q9HBX3 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC13.26□□□□□ -0.29
SND1-IT1Q9HBX3 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SND1-IT1Q9HBX3 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC13.26□□□□□ -0.29
SND1-IT1Q9HBX3 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SND1-IT1Q9HBX3 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
SND1-IT1Q9HBX3 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SND1-IT1Q9HBX3 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC13.26□□□□□ -0.29
SND1-IT1Q9HBX3 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
SND1-IT1Q9HBX3 AC027682.1-201ENST00000562846 899 ntBASIC13.26□□□□□ -0.29
SND1-IT1Q9HBX3 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC13.26□□□□□ -0.29
SND1-IT1Q9HBX3 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
SND1-IT1Q9HBX3 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
SND1-IT1Q9HBX3 Z82202.1-201ENST00000623446 1880 ntBASIC13.26□□□□□ -0.29
SND1-IT1Q9HBX3 MIR2861-201ENST00000636310 90 ntBASIC13.26□□□□□ -0.29
SND1-IT1Q9HBX3 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
SND1-IT1Q9HBX3 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
SND1-IT1Q9HBX3 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
SND1-IT1Q9HBX3 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SND1-IT1Q9HBX3 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC13.25□□□□□ -0.29
SND1-IT1Q9HBX3 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SND1-IT1Q9HBX3 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SND1-IT1Q9HBX3 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SND1-IT1Q9HBX3 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SND1-IT1Q9HBX3 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SND1-IT1Q9HBX3 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SND1-IT1Q9HBX3 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms