RNA–Protein interactions for RNA: ENST00000394883.3

RCN2-202, Transcript of reticulocalbin 2, humanhuman

TSL 5 BASIC

Gene RCN2, Length 1,366 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCN2-202ENST00000394883 NISCHQ9Y2I1 1504 aa53.72■■■■■ 6.19
RCN2-202ENST00000394883 CCDC180Q9P1Z9 1646 aa47.87■■■■■ 5.25
RCN2-202ENST00000394883 ABCC9O60706 1549 aa46.92■■■■■ 5.1
RCN2-202ENST00000394883 RB1CC1Q8TDY2 1594 aa45.16■■■■■ 4.82
RCN2-202ENST00000394883 NACADO15069 1562 aa45.1■■■■■ 4.81
RCN2-202ENST00000394883 MYO15BQ96JP2 1530 aa44.87■■■■■ 4.77
RCN2-202ENST00000394883 DCAF8L2P0C7V8 631 aa44.82■■■■■ 4.76
RCN2-202ENST00000394883 ZCCHC6Q5VYS8 1495 aaKnown RBP44.69■■■■■ 4.74
RCN2-202ENST00000394883 DCAF1Q9Y4B6 1507 aa44.55■■■■■ 4.72
RCN2-202ENST00000394883 UNC13AQ9UPW8 1703 aa44.04■■■■■ 4.64
RCN2-202ENST00000394883 PABPN1Q86U42 306 aaKnown RBP eCLIP43.8■■■■■ 4.6
RCN2-202ENST00000394883 BICRAQ9NZM4 1560 aa43.77■■■■■ 4.6
RCN2-202ENST00000394883 SCRIBQ14160 1630 aa43.49■■■■■ 4.55
RCN2-202ENST00000394883 SHROOM4Q9ULL8 1493 aa43.45■■■■■ 4.55
RCN2-202ENST00000394883 DNAJC5BQ9UF47 199 aa43.33■■■■■ 4.53
RCN2-202ENST00000394883 EIF4G1Q04637 1599 aaKnown RBP42.63■■■■■ 4.41
RCN2-202ENST00000394883 CC2D2AQ9P2K1 1620 aa42.49■■■■■ 4.39
RCN2-202ENST00000394883 CECR2Q9BXF3 1484 aa42.25■■■■■ 4.35
RCN2-202ENST00000394883 SMARCA4P51532 1647 aa41.68■■■■■ 4.26
RCN2-202ENST00000394883 BAZ1AQ9NRL2 1556 aaPredicted RBP41.65■■■■■ 4.26
RCN2-202ENST00000394883 NCAPD3P42695 1498 aa41.65■■■■■ 4.26
RCN2-202ENST00000394883 ATAD2BQ9ULI0 1458 aa41.56■■■■■ 4.24
RCN2-202ENST00000394883 SMARCA2P51531 1590 aa41.52■■■■■ 4.24
RCN2-202ENST00000394883 PEG3Q9GZU2 1588 aa41.4■■■■■ 4.22
RCN2-202ENST00000394883 HMGXB3Q12766 1538 aa41.38■■■■■ 4.21
RCN2-202ENST00000394883 MROH2BQ7Z745 1585 aa41.32■■■■■ 4.21
RCN2-202ENST00000394883 BAZ1BQ9UIG0 1483 aaKnown RBP41.16■■■■■ 4.18
RCN2-202ENST00000394883 WIZO95785 1651 aa40.83■■■■■ 4.13
RCN2-202ENST00000394883 RSF1Q96T23 1441 aaPredicted RBP40.83■■■■■ 4.13
RCN2-202ENST00000394883 LAMC3Q9Y6N6 1575 aa40.54■■■■■ 4.08
RCN2-202ENST00000394883 NESP48681 1621 aa40.53■■■■■ 4.08
RCN2-202ENST00000394883 ERCC6Q03468 1493 aa40.48■■■■■ 4.07
RCN2-202ENST00000394883 TOP2AP11388 1531 aaKnown RBP40.45■■■■■ 4.07
RCN2-202ENST00000394883 CADPSQ9ULU8 1353 aa40.38■■■■■ 4.05
RCN2-202ENST00000394883 PDS5BQ9NTI5 1447 aa40.28■■■■■ 4.04
RCN2-202ENST00000394883 CUX2O14529 1486 aa40.27■■■■■ 4.04
RCN2-202ENST00000394883 CFTRP13569 1480 aa40.1■■■■■ 4.01
RCN2-202ENST00000394883 KIF21AQ7Z4S6 1674 aa40.05■■■■■ 4
RCN2-202ENST00000394883 THOC2Q8NI27 1593 aaKnown RBP40.02■■■■■ 4
RCN2-202ENST00000394883 CCDC88BA6NC98 1476 aa39.98■■■■□ 3.99
RCN2-202ENST00000394883 FANCD2Q9BXW9 1451 aa39.85■■■■□ 3.97
RCN2-202ENST00000394883 MRC2Q9UBG0 1479 aa39.82■■■■□ 3.97
RCN2-202ENST00000394883 CEP164Q9UPV0 1460 aa39.81■■■■□ 3.96
RCN2-202ENST00000394883 WDR62O43379 1518 aa39.72■■■■□ 3.95
RCN2-202ENST00000394883 PRDM2Q13029 1718 aa39.7■■■■□ 3.95
RCN2-202ENST00000394883 SUPT5HO00267 1087 aaKnown RBP39.47■■■■□ 3.91
RCN2-202ENST00000394883 URB2Q14146 1524 aaKnown RBP39.45■■■■□ 3.91
RCN2-202ENST00000394883 DNAJC5Q9H3Z4 198 aa39.32■■■■□ 3.88
RCN2-202ENST00000394883 ABCC8Q09428 1581 aa39.3■■■■□ 3.88
RCN2-202ENST00000394883 TOPBP1Q92547 1522 aa39.2■■■■□ 3.87
RCN2-202ENST00000394883 DNMBPQ6XZF7 1577 aa39.13■■■■□ 3.85
RCN2-202ENST00000394883 IFT140Q96RY7 1462 aa39.04■■■■□ 3.84
RCN2-202ENST00000394883 POLA1P09884 1462 aaPredicted RBP38.84■■■■□ 3.81
RCN2-202ENST00000394883 ZNF608Q9ULD9 1512 aaPredicted RBP38.79■■■■□ 3.8
RCN2-202ENST00000394883 TARBP1Q13395 1621 aaKnown RBP38.79■■■■□ 3.8
RCN2-202ENST00000394883 CUX1P39880 1505 aa38.78■■■■□ 3.8
RCN2-202ENST00000394883 SOGA1O94964 1423 aa38.7■■■■□ 3.79
RCN2-202ENST00000394883 FGD5Q6ZNL6 1462 aa38.68■■■■□ 3.78
RCN2-202ENST00000394883 EIF4G3O43432 1585 aaKnown RBP38.63■■■■□ 3.77
RCN2-202ENST00000394883 RAD54L2Q9Y4B4 1467 aa38.62■■■■□ 3.77
RCN2-202ENST00000394883 WDR97A6NE52 1622 aa38.57■■■■□ 3.77
RCN2-202ENST00000394883 AQRO60306 1485 aaKnown RBP eCLIP38.56■■■■□ 3.768e-7■■■■■ 28.7
RCN2-202ENST00000394883 OSCARQ8IYS5 282 aa38.56■■■■□ 3.76
RCN2-202ENST00000394883 WRNQ14191 1432 aaPredicted RBP eCLIP38.49■■■■□ 3.75
RCN2-202ENST00000394883 TDRD9Q8NDG6 1382 aaKnown RBP38.46■■■■□ 3.75
RCN2-202ENST00000394883 TOP2BQ02880 1626 aa38.44■■■■□ 3.74
RCN2-202ENST00000394883 BIVM-ERCC5R4GMW8 1640 aa38.42■■■■□ 3.74
RCN2-202ENST00000394883 ABCA10Q8WWZ4 1543 aa38.38■■■■□ 3.74
RCN2-202ENST00000394883 SYNJ1O43426 1573 aa38.33■■■■□ 3.73
RCN2-202ENST00000394883 GRIN2BQ13224 1484 aa38.28■■■■□ 3.72
RCN2-202ENST00000394883 GAPVD1Q14C86 1478 aa38.24■■■■□ 3.71
RCN2-202ENST00000394883 MAGI1Q96QZ7 1491 aaPredicted RBP38.23■■■■□ 3.71
RCN2-202ENST00000394883 ABCA5Q8WWZ7 1642 aa38.19■■■■□ 3.7
RCN2-202ENST00000394883 SNAPC4Q5SXM2 1469 aa38.18■■■■□ 3.7
RCN2-202ENST00000394883 CHD1O14646 1710 aa38.16■■■■□ 3.7
RCN2-202ENST00000394883 PBRM1Q86U86 1689 aa38.1■■■■□ 3.69
RCN2-202ENST00000394883 FBLN2P98095 1184 aa38.09■■■■□ 3.69
RCN2-202ENST00000394883 SYNJ2O15056 1496 aa38.07■■■■□ 3.68
RCN2-202ENST00000394883 CHMP7Q8WUX9 453 aaPredicted RBP38.05■■■■□ 3.68
RCN2-202ENST00000394883 ERICH3Q5RHP9 1530 aa37.93■■■■□ 3.66
RCN2-202ENST00000394883 ARHGEF11O15085 1522 aa37.85■■■■□ 3.65
RCN2-202ENST00000394883 RIMBP3CA6NJZ7 1639 aa37.85■■■■□ 3.65
RCN2-202ENST00000394883 RIMBP3BA6NNM3 1639 aa37.85■■■■□ 3.65
RCN2-202ENST00000394883 RIMBP3Q9UFD9 1639 aa37.85■■■■□ 3.65
RCN2-202ENST00000394883 CLASP1Q7Z460 1538 aa37.83■■■■□ 3.65
RCN2-202ENST00000394883 FHAD1B1AJZ9 1412 aa37.82■■■■□ 3.65
RCN2-202ENST00000394883 ADAMTS12P58397 1594 aa37.81■■■■□ 3.64
RCN2-202ENST00000394883 GRIN2AQ12879 1464 aa37.77■■■■□ 3.64
RCN2-202ENST00000394883 KIF27Q86VH2 1401 aa37.72■■■■□ 3.63
RCN2-202ENST00000394883 TRIM41Q8WV44 630 aa37.71■■■■□ 3.63
RCN2-202ENST00000394883 NUP160Q12769 1436 aa37.66■■■■□ 3.62
RCN2-202ENST00000394883 IGF1RP08069 1367 aa37.63■■■■□ 3.61
RCN2-202ENST00000394883 CEP170Q5SW79 1584 aa37.55■■■■□ 3.6
RCN2-202ENST00000394883 ARAP1Q96P48 1450 aa37.51■■■■□ 3.6
RCN2-202ENST00000394883 CYB5RLQ6IPT4 315 aa37.5■■■■□ 3.59
RCN2-202ENST00000394883 CUL7Q14999 1698 aa37.49■■■■□ 3.59
RCN2-202ENST00000394883 SHROOM2Q13796 1616 aa37.38■■■■□ 3.57
RCN2-202ENST00000394883 CARMIL1Q5VZK9 1371 aa37.37■■■■□ 3.57
RCN2-202ENST00000394883 JPH4Q96JJ6 628 aa37.28■■■■□ 3.56
RCN2-202ENST00000394883 RUSC2Q8N2Y8 1516 aa37.26■■■■□ 3.56
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms