Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CPNE1Q99829 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CPNE1Q99829 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CPNE1Q99829 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.82■□□□□ 0.76
CPNE1Q99829 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CPNE1Q99829 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CPNE1Q99829 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CPNE1Q99829 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CPNE1Q99829 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.82■□□□□ 0.76
CPNE1Q99829 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CPNE1Q99829 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.82■□□□□ 0.76
CPNE1Q99829 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.82■□□□□ 0.76
CPNE1Q99829 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.82■□□□□ 0.76
CPNE1Q99829 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.82■□□□□ 0.76
CPNE1Q99829 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
CPNE1Q99829 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.82■□□□□ 0.76
CPNE1Q99829 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.82■□□□□ 0.76
CPNE1Q99829 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CPNE1Q99829 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CPNE1Q99829 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.81■□□□□ 0.76
CPNE1Q99829 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.81■□□□□ 0.76
CPNE1Q99829 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
CPNE1Q99829 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CPNE1Q99829 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
CPNE1Q99829 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CPNE1Q99829 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
CPNE1Q99829 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.81■□□□□ 0.76
CPNE1Q99829 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CPNE1Q99829 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CPNE1Q99829 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.81■□□□□ 0.76
CPNE1Q99829 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CPNE1Q99829 AL355472.2-201ENST00000422958 438 ntBASIC19.81■□□□□ 0.76
CPNE1Q99829 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.81■□□□□ 0.76
CPNE1Q99829 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.81■□□□□ 0.76
CPNE1Q99829 AC023632.3-201ENST00000521633 145 ntBASIC19.81■□□□□ 0.76
CPNE1Q99829 AL589743.5-201ENST00000616611 1050 ntBASIC19.81■□□□□ 0.76
CPNE1Q99829 BID-214ENST00000617586 542 ntTSL 5 BASIC19.81■□□□□ 0.76
CPNE1Q99829 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.81■□□□□ 0.76
CPNE1Q99829 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CPNE1Q99829 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.81■□□□□ 0.76
CPNE1Q99829 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CPNE1Q99829 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CPNE1Q99829 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.81■□□□□ 0.76
CPNE1Q99829 Z82202.1-201ENST00000623446 1880 ntBASIC19.81■□□□□ 0.76
CPNE1Q99829 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
CPNE1Q99829 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CPNE1Q99829 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CPNE1Q99829 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CPNE1Q99829 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CPNE1Q99829 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CPNE1Q99829 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CPNE1Q99829 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
CPNE1Q99829 AC098818.2-201ENST00000564925 2320 ntBASIC19.8■□□□□ 0.76
CPNE1Q99829 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CPNE1Q99829 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CPNE1Q99829 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CPNE1Q99829 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CPNE1Q99829 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CPNE1Q99829 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CPNE1Q99829 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CPNE1Q99829 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.8■□□□□ 0.76
CPNE1Q99829 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.8■□□□□ 0.76
CPNE1Q99829 C2orf69P4-201ENST00000565394 541 ntBASIC19.8■□□□□ 0.76
CPNE1Q99829 OR10C1-204ENST00000622521 1039 ntBASIC19.8■□□□□ 0.76
CPNE1Q99829 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.8■□□□□ 0.76
CPNE1Q99829 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CPNE1Q99829 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CPNE1Q99829 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CPNE1Q99829 PHGDH-210ENST00000641115 1638 ntBASIC19.8■□□□□ 0.76
CPNE1Q99829 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CPNE1Q99829 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.79■□□□□ 0.76
CPNE1Q99829 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CPNE1Q99829 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CPNE1Q99829 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CPNE1Q99829 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.79■□□□□ 0.76
CPNE1Q99829 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CPNE1Q99829 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CPNE1Q99829 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CPNE1Q99829 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CPNE1Q99829 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CPNE1Q99829 AC010980.2-201ENST00000587099 1412 ntBASIC19.79■□□□□ 0.76
CPNE1Q99829 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CPNE1Q99829 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CPNE1Q99829 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.79■□□□□ 0.76
CPNE1Q99829 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.79■□□□□ 0.76
CPNE1Q99829 AC007322.1-201ENST00000426983 750 ntBASIC19.79■□□□□ 0.76
CPNE1Q99829 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CPNE1Q99829 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.79■□□□□ 0.76
CPNE1Q99829 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.79■□□□□ 0.76
CPNE1Q99829 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.79■□□□□ 0.76
CPNE1Q99829 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.79■□□□□ 0.76
CPNE1Q99829 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CPNE1Q99829 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.79■□□□□ 0.76
CPNE1Q99829 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CPNE1Q99829 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
CPNE1Q99829 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CPNE1Q99829 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.79■□□□□ 0.76
CPNE1Q99829 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
CPNE1Q99829 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CPNE1Q99829 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms