RNA–Protein interactions for RNA: ENST00000438107.1

FAM239A-202, Transcript of family with sequence similarity 239 member A, humanhuman

TSL 5 BASIC

Gene FAM239A, Length 2,155 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239A-202ENST00000438107 NISCHQ9Y2I1 1504 aa39.92■■■■□ 3.98
FAM239A-202ENST00000438107 CCDC180Q9P1Z9 1646 aa34.1■■■■□ 3.05
FAM239A-202ENST00000438107 ZCCHC6Q5VYS8 1495 aaKnown RBP33.83■■■■□ 3.01
FAM239A-202ENST00000438107 SHROOM4Q9ULL8 1493 aa33.74■■■□□ 2.99
FAM239A-202ENST00000438107 SUPT5HO00267 1087 aaKnown RBP33.17■■■□□ 2.9
FAM239A-202ENST00000438107 DCAF1Q9Y4B6 1507 aa32.95■■■□□ 2.86
FAM239A-202ENST00000438107 DCAF8L2P0C7V8 631 aa32.74■■■□□ 2.83
FAM239A-202ENST00000438107 CHIC1Q5VXU3 224 aa32.48■■■□□ 2.79
FAM239A-202ENST00000438107 MYO15BQ96JP2 1530 aa32.37■■■□□ 2.77
FAM239A-202ENST00000438107 ABCC9O60706 1549 aa31.97■■■□□ 2.71
FAM239A-202ENST00000438107 HRCP23327 699 aa31.74■■■□□ 2.67
FAM239A-202ENST00000438107 SCRIBQ14160 1630 aa31.7■■■□□ 2.67
FAM239A-202ENST00000438107 RSF1Q96T23 1441 aaPredicted RBP31.56■■■□□ 2.64
FAM239A-202ENST00000438107 NACADO15069 1562 aa31.51■■■□□ 2.63
FAM239A-202ENST00000438107 PCGF6Q9BYE7 350 aa31.47■■■□□ 2.63
FAM239A-202ENST00000438107 RB1CC1Q8TDY2 1594 aa31.37■■■□□ 2.61
FAM239A-202ENST00000438107 LOC105371045A0A1W2PR82 267 aa31.36■■■□□ 2.61
FAM239A-202ENST00000438107 TRIM26Q12899 539 aaPredicted RBP31.05■■■□□ 2.56
FAM239A-202ENST00000438107 TRIM41Q8WV44 630 aa31.02■■■□□ 2.56
FAM239A-202ENST00000438107 CECR2Q9BXF3 1484 aa30.98■■■□□ 2.55
FAM239A-202ENST00000438107 MROH2BQ7Z745 1585 aa30.95■■■□□ 2.55
FAM239A-202ENST00000438107 WIZO95785 1651 aa30.82■■■□□ 2.53
FAM239A-202ENST00000438107 PPARGC1BQ86YN6 1023 aaKnown RBP30.81■■■□□ 2.52
FAM239A-202ENST00000438107 BAZ1AQ9NRL2 1556 aaPredicted RBP30.78■■■□□ 2.52
FAM239A-202ENST00000438107 EIF4G1Q04637 1599 aaKnown RBP30.6■■■□□ 2.49
FAM239A-202ENST00000438107 UNC13AQ9UPW8 1703 aa30.59■■■□□ 2.49
FAM239A-202ENST00000438107 FAM9AQ8IZU1 332 aaPredicted RBP30.58■■■□□ 2.49
FAM239A-202ENST00000438107 ZEB1P37275 1124 aaPredicted RBP30.55■■■□□ 2.48
FAM239A-202ENST00000438107 TOP2AP11388 1531 aaKnown RBP30.45■■■□□ 2.46
FAM239A-202ENST00000438107 SMARCA4P51532 1647 aa30.41■■■□□ 2.46
FAM239A-202ENST00000438107 BICRAQ9NZM4 1560 aa30.25■■■□□ 2.43
FAM239A-202ENST00000438107 SMARCA2P51531 1590 aa30.24■■■□□ 2.43
FAM239A-202ENST00000438107 PABPN1Q86U42 306 aaKnown RBP eCLIP30.22■■■□□ 2.43
FAM239A-202ENST00000438107 CCDC88BA6NC98 1476 aa30.2■■■□□ 2.43
FAM239A-202ENST00000438107 EHMT2Q96KQ7 1210 aa30.15■■■□□ 2.42
FAM239A-202ENST00000438107 ABCC8Q09428 1581 aa30.1■■■□□ 2.41
FAM239A-202ENST00000438107 WRNQ14191 1432 aaPredicted RBP eCLIP29.96■■■□□ 2.39
FAM239A-202ENST00000438107 EEA1Q15075 1411 aa29.96■■■□□ 2.39
FAM239A-202ENST00000438107 PEG3Q9GZU2 1588 aa29.92■■■□□ 2.38
FAM239A-202ENST00000438107 TNIKQ9UKE5 1360 aa29.84■■■□□ 2.37
FAM239A-202ENST00000438107 CEP162Q5TB80 1403 aa29.82■■■□□ 2.36
FAM239A-202ENST00000438107 SOGA1O94964 1423 aa29.81■■■□□ 2.36
FAM239A-202ENST00000438107 CSRNP3Q8WYN3 585 aa29.71■■■□□ 2.35
FAM239A-202ENST00000438107 GOLGA3Q08378 1498 aa29.66■■■□□ 2.34
FAM239A-202ENST00000438107 RUSC2Q8N2Y8 1516 aa29.64■■■□□ 2.34
FAM239A-202ENST00000438107 ATAD2BQ9ULI0 1458 aa29.61■■■□□ 2.33
FAM239A-202ENST00000438107 CCER1Q8TC90 406 aaPredicted RBP29.6■■■□□ 2.33
FAM239A-202ENST00000438107 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.59■■■□□ 2.33
FAM239A-202ENST00000438107 KIF21BO75037 1637 aa29.54■■■□□ 2.32
FAM239A-202ENST00000438107 SYNJ1O43426 1573 aa29.52■■■□□ 2.32
FAM239A-202ENST00000438107 BAZ1BQ9UIG0 1483 aaKnown RBP29.51■■■□□ 2.31
FAM239A-202ENST00000438107 UBTFP17480 764 aaKnown RBP29.49■■■□□ 2.31
FAM239A-202ENST00000438107 CEP164Q9UPV0 1460 aa29.49■■■□□ 2.31
FAM239A-202ENST00000438107 TTBK1Q5TCY1 1321 aaPredicted RBP29.26■■■□□ 2.28
FAM239A-202ENST00000438107 TOP2BQ02880 1626 aa29.25■■■□□ 2.27
FAM239A-202ENST00000438107 CLIP1P30622 1438 aa29.24■■■□□ 2.27
FAM239A-202ENST00000438107 SCAF1Q9H7N4 1312 aaKnown RBP29.21■■■□□ 2.27
FAM239A-202ENST00000438107 BIVM-ERCC5R4GMW8 1640 aa29.2■■■□□ 2.26
FAM239A-202ENST00000438107 VPS8Q8N3P4 1428 aa29.19■■■□□ 2.26
FAM239A-202ENST00000438107 HMGXB3Q12766 1538 aa29.15■■■□□ 2.26
FAM239A-202ENST00000438107 RAPGEF2Q9Y4G8 1499 aa29.13■■■□□ 2.25
FAM239A-202ENST00000438107 DIEXFQ68CQ4 756 aaKnown RBP29.12■■■□□ 2.25
FAM239A-202ENST00000438107 NCAPD3P42695 1498 aa29.12■■■□□ 2.25
FAM239A-202ENST00000438107 ERICH3Q5RHP9 1530 aa29.05■■■□□ 2.24
FAM239A-202ENST00000438107 PELP1Q8IZL8 1130 aaKnown RBP29.03■■■□□ 2.24
FAM239A-202ENST00000438107 ACIN1Q9UKV3 1341 aaKnown RBP29.01■■■□□ 2.23
FAM239A-202ENST00000438107 APLP2Q06481 763 aa28.95■■■□□ 2.22
FAM239A-202ENST00000438107 PRXQ9BXM0 1461 aa28.94■■■□□ 2.22
FAM239A-202ENST00000438107 ZNF316A6NFI3 1004 aaPredicted RBP28.94■■■□□ 2.22
FAM239A-202ENST00000438107 CENPBP07199 599 aaPredicted RBP28.88■■■□□ 2.21
FAM239A-202ENST00000438107 NEUROD1Q13562 356 aa28.85■■■□□ 2.21
FAM239A-202ENST00000438107 HNRNPUL2Q1KMD3 747 aaKnown RBP28.85■■■□□ 2.21
FAM239A-202ENST00000438107 CUX1P39880 1505 aa28.84■■■□□ 2.21
FAM239A-202ENST00000438107 CFTRP13569 1480 aa28.82■■■□□ 2.2
FAM239A-202ENST00000438107 ARAP1Q96P48 1450 aa28.79■■■□□ 2.2
FAM239A-202ENST00000438107 PRDM2Q13029 1718 aa28.77■■■□□ 2.2
FAM239A-202ENST00000438107 KIF27Q86VH2 1401 aa28.76■■■□□ 2.19
FAM239A-202ENST00000438107 CC2D2AQ9P2K1 1620 aa28.71■■■□□ 2.19
FAM239A-202ENST00000438107 CLSPNQ9HAW4 1339 aa28.67■■■□□ 2.18
FAM239A-202ENST00000438107 RANGAP1P46060 587 aaPredicted RBP28.64■■■□□ 2.18
FAM239A-202ENST00000438107 GTF3C3Q9Y5Q9 886 aa28.58■■■□□ 2.17
FAM239A-202ENST00000438107 RRBP1Q9P2E9 1410 aaKnown RBP28.57■■■□□ 2.16
FAM239A-202ENST00000438107 ARHGAP35Q9NRY4 1499 aa28.51■■■□□ 2.16
FAM239A-202ENST00000438107 DHX57Q6P158 1386 aaKnown RBP28.51■■■□□ 2.15
FAM239A-202ENST00000438107 CADPSQ9ULU8 1353 aa28.49■■■□□ 2.15
FAM239A-202ENST00000438107 KANK4Q5T7N3 995 aaPredicted RBP28.49■■■□□ 2.15
FAM239A-202ENST00000438107 CUX2O14529 1486 aa28.48■■■□□ 2.15
FAM239A-202ENST00000438107 MIER1Q8N108 512 aa28.43■■■□□ 2.14
FAM239A-202ENST00000438107 MAP3K1Q13233 1512 aa28.4■■■□□ 2.14
FAM239A-202ENST00000438107 IGF1RP08069 1367 aa28.37■■■□□ 2.13
FAM239A-202ENST00000438107 CCNB3Q8WWL7 1395 aa28.36■■■□□ 2.13
FAM239A-202ENST00000438107 TIAM1Q13009 1591 aa28.31■■■□□ 2.12
FAM239A-202ENST00000438107 FGD5Q6ZNL6 1462 aa28.29■■■□□ 2.12
FAM239A-202ENST00000438107 CARMIL1Q5VZK9 1371 aa28.26■■■□□ 2.11
FAM239A-202ENST00000438107 YTHDC1Q96MU7 727 aaKnown RBP28.26■■■□□ 2.11
FAM239A-202ENST00000438107 FANCD2Q9BXW9 1451 aa28.2■■■□□ 2.11
FAM239A-202ENST00000438107 CFAP43Q8NDM7 1665 aa28.17■■■□□ 2.1
FAM239A-202ENST00000438107 FHAD1B1AJZ9 1412 aa28.15■■■□□ 2.1
FAM239A-202ENST00000438107 NESP48681 1621 aa28.15■■■□□ 2.1
FAM239A-202ENST00000438107 LRRC9Q6ZRR7 1453 aa28.15■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms