Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.98■□□□□ 0.47
CLPXO76031 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLPXO76031 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLPXO76031 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
CLPXO76031 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.98■□□□□ 0.47
CLPXO76031 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
CLPXO76031 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CLPXO76031 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLPXO76031 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CLPXO76031 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CLPXO76031 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CLPXO76031 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.97■□□□□ 0.47
CLPXO76031 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.97■□□□□ 0.47
CLPXO76031 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CLPXO76031 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLPXO76031 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CLPXO76031 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLPXO76031 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CLPXO76031 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLPXO76031 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLPXO76031 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC17.97■□□□□ 0.47
CLPXO76031 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC17.97■□□□□ 0.47
CLPXO76031 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC17.97■□□□□ 0.47
CLPXO76031 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.97■□□□□ 0.47
CLPXO76031 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.97■□□□□ 0.47
CLPXO76031 CROCCP3-202ENST00000420820 1947 ntBASIC17.97■□□□□ 0.47
CLPXO76031 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLPXO76031 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLPXO76031 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC17.97■□□□□ 0.47
CLPXO76031 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CLPXO76031 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CLPXO76031 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLPXO76031 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.96■□□□□ 0.47
CLPXO76031 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLPXO76031 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.96■□□□□ 0.47
CLPXO76031 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLPXO76031 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CLPXO76031 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CLPXO76031 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CLPXO76031 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLPXO76031 BX842568.3-201ENST00000418104 571 ntBASIC17.96■□□□□ 0.47
CLPXO76031 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CLPXO76031 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC17.96■□□□□ 0.47
CLPXO76031 MIR6821-201ENST00000617625 74 ntBASIC17.96■□□□□ 0.47
CLPXO76031 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.96■□□□□ 0.47
CLPXO76031 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLPXO76031 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLPXO76031 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CLPXO76031 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLPXO76031 AL691432.2-201ENST00000607222 2038 ntBASIC17.96■□□□□ 0.47
CLPXO76031 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.96■□□□□ 0.47
CLPXO76031 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.46
CLPXO76031 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
CLPXO76031 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
CLPXO76031 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
CLPXO76031 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLPXO76031 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.95■□□□□ 0.46
CLPXO76031 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLPXO76031 RASA4CP-201ENST00000424092 1398 ntBASIC17.95■□□□□ 0.46
CLPXO76031 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
CLPXO76031 AP006587.3-201ENST00000525742 1516 ntBASIC17.95■□□□□ 0.46
CLPXO76031 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CLPXO76031 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLPXO76031 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.95■□□□□ 0.46
CLPXO76031 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
CLPXO76031 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLPXO76031 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CLPXO76031 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CLPXO76031 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CLPXO76031 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
CLPXO76031 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.95■□□□□ 0.46
CLPXO76031 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLPXO76031 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLPXO76031 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLPXO76031 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.94■□□□□ 0.46
CLPXO76031 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CLPXO76031 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC17.94■□□□□ 0.46
CLPXO76031 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLPXO76031 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
CLPXO76031 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CLPXO76031 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC17.94■□□□□ 0.46
CLPXO76031 BX005040.4-201ENST00000637145 1518 ntBASIC17.94■□□□□ 0.46
CLPXO76031 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLPXO76031 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.94■□□□□ 0.46
CLPXO76031 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLPXO76031 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC17.94■□□□□ 0.46
CLPXO76031 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
CLPXO76031 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC17.94■□□□□ 0.46
CLPXO76031 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC17.94■□□□□ 0.46
CLPXO76031 AC027682.1-201ENST00000562846 899 ntBASIC17.94■□□□□ 0.46
CLPXO76031 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.94■□□□□ 0.46
CLPXO76031 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CLPXO76031 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.94■□□□□ 0.46
CLPXO76031 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
CLPXO76031 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLPXO76031 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLPXO76031 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CLPXO76031 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLPXO76031 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.93■□□□□ 0.46
CLPXO76031 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms