Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 CHD4-211ENST00000544484 6554 ntTSL 2 BASIC12.9□□□□□ -0.342e-13■■■■□ 22.5
XRN2Q9H0D6 RPL23A-205ENST00000472628 639 ntTSL 1 (best) BASIC12.83□□□□□ -0.362e-13■■■■□ 22.5
XRN2Q9H0D6 NOP2-201ENST00000322166 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.361e-6■■■■□ 22.5
XRN2Q9H0D6 SMG7-214ENST00000508461 3985 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.371e-6■■■■□ 22.5
XRN2Q9H0D6 IP6K1-202ENST00000395238 4117 ntTSL 3 BASIC12.41□□□□□ -0.422e-13■■■■□ 22.5
XRN2Q9H0D6 NOP2-203ENST00000399466 2701 ntTSL 1 (best) BASIC12.35□□□□□ -0.431e-6■■■■□ 22.5
XRN2Q9H0D6 SMG7-212ENST00000507469 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.531e-6■■■■□ 22.5
XRN2Q9H0D6 RPL23A-202ENST00000394935 580 ntTSL 311.57□□□□□ -0.562e-13■■■■□ 22.5
XRN2Q9H0D6 NOP2-223ENST00000620535 2791 ntTSL 1 (best) BASIC11.36□□□□□ -0.591e-6■■■■□ 22.5
XRN2Q9H0D6 SMG7-216ENST00000638826 219 ntTSL 2 BASIC10.27□□□□□ -0.771e-6■■■■□ 22.5
XRN2Q9H0D6 SMG7-201ENST00000347615 5788 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.771e-6■■■■□ 22.5
XRN2Q9H0D6 SMG7-215ENST00000515829 5629 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.81e-6■■■■□ 22.5
XRN2Q9H0D6 NOP2-207ENST00000537442 2613 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.841e-6■■■■□ 22.5
XRN2Q9H0D6 NOP2-202ENST00000382421 2736 ntTSL 1 (best) BASIC9.38□□□□□ -0.911e-6■■■■□ 22.5
XRN2Q9H0D6 RPL23A-203ENST00000394938 688 ntTSL 2 BASIC9.2□□□□□ -0.942e-13■■■■□ 22.5
XRN2Q9H0D6 NOP2-218ENST00000545200 2751 ntTSL 1 (best) BASIC9.2□□□□□ -0.941e-6■■■■□ 22.5
XRN2Q9H0D6 SMG7-202ENST00000367537 5970 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.031e-6■■■■□ 22.5
XRN2Q9H0D6 RPL23A-201ENST00000355731 587 ntTSL 57.22□□□□□ -1.252e-13■■■■□ 22.5
XRN2Q9H0D6 RPL23A-207ENST00000578181 593 ntTSL 23.72□□□□□ -1.812e-13■■■■□ 22.5
XRN2Q9H0D6 MFSD12-208ENST00000588918 2040 ntTSL 527.96■■■□□ 2.071e-6■■■■□ 22.5
XRN2Q9H0D6 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC27.84■■■□□ 2.051e-6■■■■□ 22.5
XRN2Q9H0D6 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC26.48■■□□□ 1.831e-6■■■■□ 22.5
XRN2Q9H0D6 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.344e-9■■■■□ 22.5
XRN2Q9H0D6 UNC13D-202ENST00000412096 3648 ntTSL 2 BASIC12.01□□□□□ -0.494e-9■■■■□ 22.5
XRN2Q9H0D6 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.296e-7■■■■□ 22.5
XRN2Q9H0D6 AFG3L1P-207ENST00000423742 1012 ntTSL 327.07■■□□□ 1.925e-6■■■■□ 22.5
XRN2Q9H0D6 HDAC4-209ENST00000487617 819 ntTSL 324.23■■□□□ 1.475e-6■■■■□ 22.5
XRN2Q9H0D6 RUVBL2-203ENST00000594017 959 ntTSL 223.88■■□□□ 1.415e-6■■■■□ 22.5
XRN2Q9H0D6 HDAC4-212ENST00000495497 849 ntTSL 522.41■■□□□ 1.185e-6■■■■□ 22.5
XRN2Q9H0D6 AFG3L1P-213ENST00000450026 494 ntTSL 421.33■■□□□ 1.015e-6■■■■□ 22.5
XRN2Q9H0D6 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC20.6■□□□□ 0.895e-6■■■■□ 22.5
XRN2Q9H0D6 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC20.2■□□□□ 0.825e-6■■■■□ 22.5
XRN2Q9H0D6 AFG3L1P-217ENST00000557444 2447 ntBASIC19.85■□□□□ 0.775e-6■■■■□ 22.5
XRN2Q9H0D6 AFG3L1P-204ENST00000421164 1706 ntTSL 1 (best)19.54■□□□□ 0.725e-6■■■■□ 22.5
XRN2Q9H0D6 AFG3L1P-215ENST00000457926 2919 ntTSL 218.23■□□□□ 0.515e-6■■■■□ 22.5
XRN2Q9H0D6 AFG3L1P-211ENST00000436447 3003 ntTSL 518.09■□□□□ 0.495e-6■■■■□ 22.5
XRN2Q9H0D6 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.77■□□□□ 0.445e-6■■■■□ 22.5
XRN2Q9H0D6 AFG3L1P-205ENST00000421780 526 ntTSL 1 (best)16.54■□□□□ 0.245e-6■■■■□ 22.5
XRN2Q9H0D6 AFG3L1P-206ENST00000423684 595 ntTSL 1 (best)16.54■□□□□ 0.245e-6■■■■□ 22.5
XRN2Q9H0D6 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.135e-8■■■■□ 22.5
XRN2Q9H0D6 AFG3L1P-202ENST00000388970 1466 ntTSL 1 (best)14.89□□□□□ -0.035e-6■■■■□ 22.5
XRN2Q9H0D6 AFG3L1P-212ENST00000437774 3134 ntTSL 213.24□□□□□ -0.295e-6■■■■□ 22.5
XRN2Q9H0D6 NPAS2-202ENST00000427413 625 ntTSL 38.67□□□□□ -1.029e-8■■■■□ 22.5
XRN2Q9H0D6 MLXIPL-211ENST00000488212 534 ntTSL 212.07□□□□□ -0.481e-12■■■■□ 22.5
XRN2Q9H0D6 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.08■□□□□ 0.644e-7■■■■□ 22.5
XRN2Q9H0D6 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.514e-7■■■■□ 22.5
XRN2Q9H0D6 CLASRP-202ENST00000391952 2213 ntTSL 1 (best)15.92■□□□□ 0.144e-7■■■■□ 22.5
XRN2Q9H0D6 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.114e-7■■■■□ 22.5
XRN2Q9H0D6 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.431e-6■■■■□ 22.5
XRN2Q9H0D6 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC25.97■■□□□ 1.754e-9■■■■□ 22.4
XRN2Q9H0D6 SUZ12P1-204ENST00000579526 563 ntTSL 225.92■■□□□ 1.744e-9■■■■□ 22.4
XRN2Q9H0D6 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.77■□□□□ 0.913e-6■■■■□ 22.4
XRN2Q9H0D6 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.588e-10■■■■□ 22.4
XRN2Q9H0D6 BCOR-207ENST00000412952 288 ntTSL 515.02■□□□□ -07e-7■■■■□ 22.4
XRN2Q9H0D6 SS18L1-201ENST00000331758 4493 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.862e-6■■■■□ 22.4
XRN2Q9H0D6 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.52■□□□□ 0.887e-7■■■■□ 22.4
XRN2Q9H0D6 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.312e-6■■■■□ 22.4
XRN2Q9H0D6 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.22e-6■■■■□ 22.4
XRN2Q9H0D6 TBKBP1-202ENST00000537587 705 ntTSL 315.06■□□□□ 06e-7■■■■□ 22.4
XRN2Q9H0D6 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC15.28■□□□□ 0.049e-7■■■■□ 22.4
XRN2Q9H0D6 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.029e-7■■■■□ 22.4
XRN2Q9H0D6 RPTOR-211ENST00000577161 3633 ntTSL 210.76□□□□□ -0.699e-7■■■■□ 22.4
XRN2Q9H0D6 VAV2-205ENST00000486113 523 ntTSL 214.99□□□□□ -0.012e-6■■■■□ 22.4
XRN2Q9H0D6 EIF4A1-206ENST00000577929 696 ntTSL 223.01■■□□□ 1.272e-9■■■■□ 22.4
XRN2Q9H0D6 EIF4A1-217ENST00000581384 642 ntTSL 511.06□□□□□ -0.642e-9■■■■□ 22.4
XRN2Q9H0D6 ATXN10-211ENST00000498009 873 ntTSL 525.28■■□□□ 1.642e-8■■■■□ 22.4
XRN2Q9H0D6 ATXN10-212ENST00000640901 1185 ntTSL 5 BASIC14.54□□□□□ -0.082e-8■■■■□ 22.4
XRN2Q9H0D6 Z95331.1-201ENST00000623075 23112 ntBASIC5.12□□□□□ -1.592e-8■■■■□ 22.4
XRN2Q9H0D6 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.613e-7■■■■□ 22.3
XRN2Q9H0D6 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.443e-7■■■■□ 22.3
XRN2Q9H0D6 GAB2-206ENST00000530915 567 ntTSL 425.26■■□□□ 1.635e-20■■■■□ 22.3
XRN2Q9H0D6 GAB2-207ENST00000534823 568 ntTSL 324.31■■□□□ 1.485e-20■■■■□ 22.3
XRN2Q9H0D6 GAB2-203ENST00000526030 650 ntTSL 323.89■■□□□ 1.415e-20■■■■□ 22.3
XRN2Q9H0D6 RPL10A-204ENST00000478340 962 ntTSL 220.46■□□□□ 0.875e-20■■■■□ 22.3
XRN2Q9H0D6 NME2-203ENST00000485076 554 ntTSL 1 (best)20.14■□□□□ 0.813e-7■■■■□ 22.3
XRN2Q9H0D6 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC19.34■□□□□ 0.693e-7■■■■□ 22.3
XRN2Q9H0D6 TRAPPC12-209ENST00000441099 698 ntTSL 318.68■□□□□ 0.582e-8■■■■□ 22.3
XRN2Q9H0D6 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.583e-7■■■■□ 22.3
XRN2Q9H0D6 RPL10A-205ENST00000490335 632 ntTSL 217.85■□□□□ 0.455e-20■■■■□ 22.3
XRN2Q9H0D6 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.383e-7■■■■□ 22.3
XRN2Q9H0D6 TRAPPC12-210ENST00000441983 683 ntTSL 317.27■□□□□ 0.362e-8■■■■□ 22.3
XRN2Q9H0D6 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.353e-7■■■■□ 22.3
XRN2Q9H0D6 RPL10A-203ENST00000467020 1069 ntTSL 316.98■□□□□ 0.315e-20■■■■□ 22.3
XRN2Q9H0D6 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.243e-7■■■■□ 22.3
XRN2Q9H0D6 NME2-201ENST00000393183 568 ntTSL 2 BASIC16.4■□□□□ 0.223e-7■■■■□ 22.3
XRN2Q9H0D6 RPL10A-202ENST00000464112 1063 ntTSL 1 (best)15.62■□□□□ 0.095e-20■■■■□ 22.3
XRN2Q9H0D6 RPL10A-201ENST00000322203 716 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.25e-20■■■■□ 22.3
XRN2Q9H0D6 NME1-NME2-201ENST00000376392 894 ntTSL 5 BASIC13.66□□□□□ -0.223e-7■■■■□ 22.3
XRN2Q9H0D6 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.245e-20■■■■□ 22.3
XRN2Q9H0D6 TRAPPC12-212ENST00000457845 579 ntTSL 413.41□□□□□ -0.262e-8■■■■□ 22.3
XRN2Q9H0D6 GAB2-205ENST00000528886 543 ntTSL 411.36□□□□□ -0.595e-20■■■■□ 22.3
XRN2Q9H0D6 TRAPPC12-215ENST00000469147 1002 ntTSL 311.2□□□□□ -0.622e-8■■■■□ 22.3
XRN2Q9H0D6 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC30.13■■■□□ 2.416e-7■■■■□ 22.3
XRN2Q9H0D6 GADD45A-203ENST00000460575 874 ntTSL 227.12■■□□□ 1.936e-7■■■■□ 22.3
XRN2Q9H0D6 ANKRD12-206ENST00000577992 390 ntTSL 326.61■■□□□ 1.854e-19■■■■□ 22.3
XRN2Q9H0D6 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.786e-7■■■■□ 22.3
XRN2Q9H0D6 GADD45A-204ENST00000484245 688 ntTSL 1 (best)25.98■■□□□ 1.757e-7■■■■□ 22.3
XRN2Q9H0D6 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC25.82■■□□□ 1.726e-7■■■■□ 22.3
XRN2Q9H0D6 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC22.74■■□□□ 1.234e-19■■■■□ 22.3
XRN2Q9H0D6 AP005263.1-202ENST00000578850 198 ntTSL 222.74■■□□□ 1.234e-19■■■■□ 22.3
Retrieved 100 of 21,068 protein–RNA pairs in 192.3 ms