RNA–Protein interactions for RNA: ENST00000423742.1

AFG3L1P-207, Transcript of AFG3 like matrix AAA peptidase subunit 1, pseudogene, humanhuman

TSL 3

Gene AFG3L1P, Length 1,012 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFG3L1P-207ENST00000423742 NISCHQ9Y2I1 1504 aa55.97■■■■■ 6.55
AFG3L1P-207ENST00000423742 CCDC180Q9P1Z9 1646 aa49.96■■■■■ 5.59
AFG3L1P-207ENST00000423742 ABCC9O60706 1549 aa49.37■■■■■ 5.49
AFG3L1P-207ENST00000423742 RB1CC1Q8TDY2 1594 aa47.27■■■■■ 5.16
AFG3L1P-207ENST00000423742 NACADO15069 1562 aa47.07■■■■■ 5.13
AFG3L1P-207ENST00000423742 DCAF8L2P0C7V8 631 aa47.06■■■■■ 5.12
AFG3L1P-207ENST00000423742 MYO15BQ96JP2 1530 aa46.59■■■■■ 5.05
AFG3L1P-207ENST00000423742 ZCCHC6Q5VYS8 1495 aaKnown RBP46.52■■■■■ 5.04
AFG3L1P-207ENST00000423742 DCAF1Q9Y4B6 1507 aa46.24■■■■■ 4.99
AFG3L1P-207ENST00000423742 UNC13AQ9UPW8 1703 aa46.22■■■■■ 4.99
AFG3L1P-207ENST00000423742 PABPN1Q86U42 306 aaKnown RBP eCLIP46.07■■■■■ 4.97
AFG3L1P-207ENST00000423742 BICRAQ9NZM4 1560 aa45.83■■■■■ 4.93
AFG3L1P-207ENST00000423742 DNAJC5BQ9UF47 199 aa45.67■■■■■ 4.9
AFG3L1P-207ENST00000423742 SCRIBQ14160 1630 aa45.62■■■■■ 4.89
AFG3L1P-207ENST00000423742 SHROOM4Q9ULL8 1493 aa45.26■■■■■ 4.84
AFG3L1P-207ENST00000423742 EIF4G1Q04637 1599 aaKnown RBP44.68■■■■■ 4.74
AFG3L1P-207ENST00000423742 CC2D2AQ9P2K1 1620 aa44.62■■■■■ 4.73
AFG3L1P-207ENST00000423742 CECR2Q9BXF3 1484 aa44.39■■■■■ 4.7
AFG3L1P-207ENST00000423742 SMARCA4P51532 1647 aa43.55■■■■■ 4.56
AFG3L1P-207ENST00000423742 BAZ1AQ9NRL2 1556 aaPredicted RBP43.42■■■■■ 4.54
AFG3L1P-207ENST00000423742 NCAPD3P42695 1498 aa43.42■■■■■ 4.54
AFG3L1P-207ENST00000423742 ATAD2BQ9ULI0 1458 aa43.4■■■■■ 4.54
AFG3L1P-207ENST00000423742 SMARCA2P51531 1590 aa43.34■■■■■ 4.53
AFG3L1P-207ENST00000423742 HMGXB3Q12766 1538 aa43.19■■■■■ 4.5
AFG3L1P-207ENST00000423742 MROH2BQ7Z745 1585 aa43.15■■■■■ 4.5
AFG3L1P-207ENST00000423742 PEG3Q9GZU2 1588 aa43.07■■■■■ 4.49
AFG3L1P-207ENST00000423742 BAZ1BQ9UIG0 1483 aaKnown RBP43.06■■■■■ 4.48
AFG3L1P-207ENST00000423742 WIZO95785 1651 aa42.7■■■■■ 4.43
AFG3L1P-207ENST00000423742 ERCC6Q03468 1493 aa42.61■■■■■ 4.41
AFG3L1P-207ENST00000423742 NESP48681 1621 aa42.58■■■■■ 4.41
AFG3L1P-207ENST00000423742 RSF1Q96T23 1441 aaPredicted RBP42.48■■■■■ 4.39
AFG3L1P-207ENST00000423742 LAMC3Q9Y6N6 1575 aa42.39■■■■■ 4.38
AFG3L1P-207ENST00000423742 CUX2O14529 1486 aa42.25■■■■■ 4.35
AFG3L1P-207ENST00000423742 TOP2AP11388 1531 aaKnown RBP42.18■■■■■ 4.34
AFG3L1P-207ENST00000423742 CADPSQ9ULU8 1353 aa42.15■■■■■ 4.34
AFG3L1P-207ENST00000423742 PDS5BQ9NTI5 1447 aa42.12■■■■■ 4.33
AFG3L1P-207ENST00000423742 KIF21AQ7Z4S6 1674 aa42.09■■■■■ 4.33
AFG3L1P-207ENST00000423742 THOC2Q8NI27 1593 aaKnown RBP42.01■■■■■ 4.32
AFG3L1P-207ENST00000423742 CFTRP13569 1480 aa41.8■■■■■ 4.28
AFG3L1P-207ENST00000423742 MRC2Q9UBG0 1479 aa41.72■■■■■ 4.27
AFG3L1P-207ENST00000423742 FANCD2Q9BXW9 1451 aa41.71■■■■■ 4.27
AFG3L1P-207ENST00000423742 CEP164Q9UPV0 1460 aa41.71■■■■■ 4.27
AFG3L1P-207ENST00000423742 CCDC88BA6NC98 1476 aa41.68■■■■■ 4.26
AFG3L1P-207ENST00000423742 WDR62O43379 1518 aa41.59■■■■■ 4.25
AFG3L1P-207ENST00000423742 PRDM2Q13029 1718 aa41.5■■■■■ 4.23
AFG3L1P-207ENST00000423742 DNAJC5Q9H3Z4 198 aa41.47■■■■■ 4.23
AFG3L1P-207ENST00000423742 URB2Q14146 1524 aaKnown RBP41.3■■■■■ 4.2
AFG3L1P-207ENST00000423742 SUPT5HO00267 1087 aaKnown RBP41.16■■■■■ 4.18
AFG3L1P-207ENST00000423742 TOPBP1Q92547 1522 aa40.98■■■■■ 4.15
AFG3L1P-207ENST00000423742 ABCC8Q09428 1581 aa40.93■■■■■ 4.14
AFG3L1P-207ENST00000423742 DNMBPQ6XZF7 1577 aa40.9■■■■■ 4.14
AFG3L1P-207ENST00000423742 IFT140Q96RY7 1462 aa40.82■■■■■ 4.12
AFG3L1P-207ENST00000423742 ZNF608Q9ULD9 1512 aaPredicted RBP40.69■■■■■ 4.1
AFG3L1P-207ENST00000423742 POLA1P09884 1462 aaPredicted RBP40.6■■■■■ 4.09
AFG3L1P-207ENST00000423742 TARBP1Q13395 1621 aaKnown RBP40.56■■■■■ 4.08
AFG3L1P-207ENST00000423742 EIF4G3O43432 1585 aaKnown RBP40.53■■■■■ 4.08
AFG3L1P-207ENST00000423742 CUX1P39880 1505 aa40.51■■■■■ 4.08
AFG3L1P-207ENST00000423742 FGD5Q6ZNL6 1462 aa40.45■■■■■ 4.07
AFG3L1P-207ENST00000423742 OSCARQ8IYS5 282 aa40.45■■■■■ 4.07
AFG3L1P-207ENST00000423742 RAD54L2Q9Y4B4 1467 aa40.45■■■■■ 4.07
AFG3L1P-207ENST00000423742 SOGA1O94964 1423 aa40.43■■■■■ 4.06
AFG3L1P-207ENST00000423742 AQRO60306 1485 aaKnown RBP eCLIP40.41■■■■■ 4.06
AFG3L1P-207ENST00000423742 TDRD9Q8NDG6 1382 aaKnown RBP40.28■■■■■ 4.04
AFG3L1P-207ENST00000423742 WDR97A6NE52 1622 aa40.19■■■■■ 4.02
AFG3L1P-207ENST00000423742 CHD1O14646 1710 aa40.13■■■■■ 4.01
AFG3L1P-207ENST00000423742 WRNQ14191 1432 aaPredicted RBP eCLIP40.09■■■■■ 4.01
AFG3L1P-207ENST00000423742 FBLN2P98095 1184 aa40.08■■■■■ 4.01
AFG3L1P-207ENST00000423742 TOP2BQ02880 1626 aa40.05■■■■■ 4
AFG3L1P-207ENST00000423742 BIVM-ERCC5R4GMW8 1640 aa40.04■■■■■ 4
AFG3L1P-207ENST00000423742 SNAPC4Q5SXM2 1469 aa40.03■■■■■ 4
AFG3L1P-207ENST00000423742 SYNJ1O43426 1573 aa40.02■■■■■ 4
AFG3L1P-207ENST00000423742 TRIM41Q8WV44 630 aa40.02■■■■■ 4
AFG3L1P-207ENST00000423742 GRIN2BQ13224 1484 aa40■■■■□ 3.99
AFG3L1P-207ENST00000423742 ABCA10Q8WWZ4 1543 aa40■■■■□ 3.99
AFG3L1P-207ENST00000423742 GAPVD1Q14C86 1478 aa39.96■■■■□ 3.99
AFG3L1P-207ENST00000423742 PBRM1Q86U86 1689 aa39.94■■■■□ 3.98
AFG3L1P-207ENST00000423742 MAGI1Q96QZ7 1491 aaPredicted RBP39.94■■■■□ 3.98
AFG3L1P-207ENST00000423742 ABCA5Q8WWZ7 1642 aa39.91■■■■□ 3.98
AFG3L1P-207ENST00000423742 CHMP7Q8WUX9 453 aaPredicted RBP39.86■■■■□ 3.97
AFG3L1P-207ENST00000423742 RIMBP3CA6NJZ7 1639 aa39.86■■■■□ 3.97
AFG3L1P-207ENST00000423742 RIMBP3BA6NNM3 1639 aa39.86■■■■□ 3.97
AFG3L1P-207ENST00000423742 RIMBP3Q9UFD9 1639 aa39.86■■■■□ 3.97
AFG3L1P-207ENST00000423742 SYNJ2O15056 1496 aa39.81■■■■□ 3.96
AFG3L1P-207ENST00000423742 ARHGEF11O15085 1522 aa39.8■■■■□ 3.96
AFG3L1P-207ENST00000423742 CLASP1Q7Z460 1538 aa39.62■■■■□ 3.93
AFG3L1P-207ENST00000423742 ADAMTS12P58397 1594 aa39.56■■■■□ 3.92
AFG3L1P-207ENST00000423742 ERICH3Q5RHP9 1530 aa39.53■■■■□ 3.92
AFG3L1P-207ENST00000423742 GRIN2AQ12879 1464 aa39.49■■■■□ 3.91
AFG3L1P-207ENST00000423742 CYB5RLQ6IPT4 315 aa39.48■■■■□ 3.91
AFG3L1P-207ENST00000423742 FHAD1B1AJZ9 1412 aa39.47■■■■□ 3.91
AFG3L1P-207ENST00000423742 ARAP1Q96P48 1450 aa39.43■■■■□ 3.9
AFG3L1P-207ENST00000423742 CEP170Q5SW79 1584 aa39.33■■■■□ 3.89
AFG3L1P-207ENST00000423742 NUP160Q12769 1436 aa39.31■■■■□ 3.88
AFG3L1P-207ENST00000423742 KIF27Q86VH2 1401 aa39.29■■■■□ 3.88
AFG3L1P-207ENST00000423742 IGF1RP08069 1367 aa39.15■■■■□ 3.86
AFG3L1P-207ENST00000423742 CUL7Q14999 1698 aa39.11■■■■□ 3.85
AFG3L1P-207ENST00000423742 ERCC6L2Q5T890 1561 aa39.08■■■■□ 3.85
AFG3L1P-207ENST00000423742 SHROOM2Q13796 1616 aa39.07■■■■□ 3.85
AFG3L1P-207ENST00000423742 RUSC2Q8N2Y8 1516 aa38.99■■■■□ 3.83
AFG3L1P-207ENST00000423742 CARMIL1Q5VZK9 1371 aa38.94■■■■□ 3.82
Retrieved 100 of 20,778 RNA–protein pairs in 2131.8 ms