RNA–Protein interactions for RNA: ENST00000577929.1

EIF4A1-206, Transcript of eukaryotic translation initiation factor 4A1, humanhuman

TSL 2

Gene EIF4A1, Length 696 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1-206ENST00000577929 NISCHQ9Y2I1 1504 aa46.88■■■■■ 5.09
EIF4A1-206ENST00000577929 ABCC9O60706 1549 aa42.34■■■■■ 4.37
EIF4A1-206ENST00000577929 CCDC180Q9P1Z9 1646 aa42.07■■■■■ 4.33
EIF4A1-206ENST00000577929 RB1CC1Q8TDY2 1594 aa40.18■■■■■ 4.02
EIF4A1-206ENST00000577929 DCAF8L2P0C7V8 631 aa40■■■■□ 3.99
EIF4A1-206ENST00000577929 NACADO15069 1562 aa39.84■■■■□ 3.97
EIF4A1-206ENST00000577929 DNAJC5BQ9UF47 199 aa39.74■■■■□ 3.95
EIF4A1-206ENST00000577929 PABPN1Q86U42 306 aaKnown RBP eCLIP39.47■■■■□ 3.91
EIF4A1-206ENST00000577929 UNC13AQ9UPW8 1703 aa39.22■■■■□ 3.87
EIF4A1-206ENST00000577929 MYO15BQ96JP2 1530 aa39.14■■■■□ 3.86
EIF4A1-206ENST00000577929 BICRAQ9NZM4 1560 aa38.91■■■■□ 3.82
EIF4A1-206ENST00000577929 ZCCHC6Q5VYS8 1495 aaKnown RBP38.79■■■■□ 3.8
EIF4A1-206ENST00000577929 DCAF1Q9Y4B6 1507 aa38.62■■■■□ 3.77
EIF4A1-206ENST00000577929 SCRIBQ14160 1630 aa38.46■■■■□ 3.75
EIF4A1-206ENST00000577929 SHROOM4Q9ULL8 1493 aa38.35■■■■□ 3.73
EIF4A1-206ENST00000577929 CC2D2AQ9P2K1 1620 aa38.17■■■■□ 3.7
EIF4A1-206ENST00000577929 CECR2Q9BXF3 1484 aa38.12■■■■□ 3.69
EIF4A1-206ENST00000577929 EIF4G1Q04637 1599 aaKnown RBP38.04■■■■□ 3.68
EIF4A1-206ENST00000577929 NCAPD3P42695 1498 aa36.75■■■■□ 3.47
EIF4A1-206ENST00000577929 ATAD2BQ9ULI0 1458 aa36.66■■■■□ 3.46
EIF4A1-206ENST00000577929 ERCC6Q03468 1493 aa36.63■■■■□ 3.45
EIF4A1-206ENST00000577929 SMARCA4P51532 1647 aa36.6■■■■□ 3.45
EIF4A1-206ENST00000577929 DNAJC5Q9H3Z4 198 aa36.6■■■■□ 3.45
EIF4A1-206ENST00000577929 SMARCA2P51531 1590 aa36.58■■■■□ 3.45
EIF4A1-206ENST00000577929 HMGXB3Q12766 1538 aa36.46■■■■□ 3.43
EIF4A1-206ENST00000577929 CUX2O14529 1486 aa36.44■■■■□ 3.42
EIF4A1-206ENST00000577929 BAZ1AQ9NRL2 1556 aaPredicted RBP36.43■■■■□ 3.42
EIF4A1-206ENST00000577929 BAZ1BQ9UIG0 1483 aaKnown RBP36.38■■■■□ 3.41
EIF4A1-206ENST00000577929 NESP48681 1621 aa36.3■■■■□ 3.4
EIF4A1-206ENST00000577929 PEG3Q9GZU2 1588 aa36.15■■■■□ 3.38
EIF4A1-206ENST00000577929 MROH2BQ7Z745 1585 aa36.14■■■■□ 3.38
EIF4A1-206ENST00000577929 LAMC3Q9Y6N6 1575 aa35.98■■■■□ 3.35
EIF4A1-206ENST00000577929 THOC2Q8NI27 1593 aaKnown RBP35.85■■■■□ 3.33
EIF4A1-206ENST00000577929 PDS5BQ9NTI5 1447 aa35.85■■■■□ 3.33
EIF4A1-206ENST00000577929 KIF21AQ7Z4S6 1674 aa35.81■■■■□ 3.32
EIF4A1-206ENST00000577929 WIZO95785 1651 aa35.74■■■■□ 3.31
EIF4A1-206ENST00000577929 CADPSQ9ULU8 1353 aa35.71■■■■□ 3.31
EIF4A1-206ENST00000577929 MRC2Q9UBG0 1479 aa35.5■■■■□ 3.27
EIF4A1-206ENST00000577929 CEP164Q9UPV0 1460 aa35.38■■■■□ 3.25
EIF4A1-206ENST00000577929 WDR62O43379 1518 aa35.36■■■■□ 3.25
EIF4A1-206ENST00000577929 RSF1Q96T23 1441 aaPredicted RBP35.35■■■■□ 3.25
EIF4A1-206ENST00000577929 FANCD2Q9BXW9 1451 aa35.32■■■■□ 3.24
EIF4A1-206ENST00000577929 TOP2AP11388 1531 aaKnown RBP35.23■■■■□ 3.23
EIF4A1-206ENST00000577929 CFTRP13569 1480 aa35.22■■■■□ 3.23
EIF4A1-206ENST00000577929 TRIM41Q8WV44 630 aa35.16■■■■□ 3.22
EIF4A1-206ENST00000577929 URB2Q14146 1524 aaKnown RBP34.98■■■■□ 3.19
EIF4A1-206ENST00000577929 OSCARQ8IYS5 282 aa34.91■■■■□ 3.18
EIF4A1-206ENST00000577929 CCDC88BA6NC98 1476 aa34.88■■■■□ 3.17
EIF4A1-206ENST00000577929 PRDM2Q13029 1718 aa34.86■■■■□ 3.17
EIF4A1-206ENST00000577929 IFT140Q96RY7 1462 aa34.65■■■■□ 3.14
EIF4A1-206ENST00000577929 TOPBP1Q92547 1522 aa34.6■■■■□ 3.13
EIF4A1-206ENST00000577929 ZNF608Q9ULD9 1512 aaPredicted RBP34.6■■■■□ 3.13
EIF4A1-206ENST00000577929 ABCC8Q09428 1581 aa34.55■■■■□ 3.12
EIF4A1-206ENST00000577929 DNMBPQ6XZF7 1577 aa34.47■■■■□ 3.11
EIF4A1-206ENST00000577929 EIF4G3O43432 1585 aaKnown RBP34.39■■■■□ 3.1
EIF4A1-206ENST00000577929 RIMBP3CA6NJZ7 1639 aa34.35■■■■□ 3.09
EIF4A1-206ENST00000577929 RIMBP3BA6NNM3 1639 aa34.35■■■■□ 3.09
EIF4A1-206ENST00000577929 RIMBP3Q9UFD9 1639 aa34.35■■■■□ 3.09
EIF4A1-206ENST00000577929 FBLN2P98095 1184 aa34.33■■■■□ 3.09
EIF4A1-206ENST00000577929 AQRO60306 1485 aaKnown RBP eCLIP34.33■■■■□ 3.096e-7■■■□□ 15.2
EIF4A1-206ENST00000577929 TARBP1Q13395 1621 aaKnown RBP34.26■■■■□ 3.07
EIF4A1-206ENST00000577929 POLA1P09884 1462 aaPredicted RBP34.24■■■■□ 3.07
EIF4A1-206ENST00000577929 ARHGEF11O15085 1522 aa34.23■■■■□ 3.07
EIF4A1-206ENST00000577929 CHD1O14646 1710 aa34.18■■■■□ 3.06
EIF4A1-206ENST00000577929 SOGA1O94964 1423 aa34.17■■■■□ 3.06
EIF4A1-206ENST00000577929 RAD54L2Q9Y4B4 1467 aa34.17■■■■□ 3.06
EIF4A1-206ENST00000577929 CYB5RLQ6IPT4 315 aa34.16■■■■□ 3.06
EIF4A1-206ENST00000577929 TDRD9Q8NDG6 1382 aaKnown RBP34.13■■■■□ 3.05
EIF4A1-206ENST00000577929 FGD5Q6ZNL6 1462 aa34.05■■■■□ 3.04
EIF4A1-206ENST00000577929 SUPT5HO00267 1087 aaKnown RBP33.99■■■■□ 3.03
EIF4A1-206ENST00000577929 CHMP7Q8WUX9 453 aaPredicted RBP33.98■■■■□ 3.03
EIF4A1-206ENST00000577929 SNAPC4Q5SXM2 1469 aa33.95■■■■□ 3.03
EIF4A1-206ENST00000577929 CUX1P39880 1505 aa33.95■■■■□ 3.03
EIF4A1-206ENST00000577929 TRHP20396 242 aaPredicted RBP33.91■■■■□ 3.02
EIF4A1-206ENST00000577929 WDR97A6NE52 1622 aa33.88■■■■□ 3.01
EIF4A1-206ENST00000577929 ARAP1Q96P48 1450 aa33.86■■■■□ 3.01
EIF4A1-206ENST00000577929 GRIN2BQ13224 1484 aa33.84■■■■□ 3.01
EIF4A1-206ENST00000577929 MAGI1Q96QZ7 1491 aaPredicted RBP33.82■■■■□ 3
EIF4A1-206ENST00000577929 SYNJ1O43426 1573 aa33.78■■■■□ 3
EIF4A1-206ENST00000577929 GAPVD1Q14C86 1478 aa33.73■■■□□ 2.99
EIF4A1-206ENST00000577929 SYNJ2O15056 1496 aa33.72■■■□□ 2.99
EIF4A1-206ENST00000577929 CLASP1Q7Z460 1538 aa33.69■■■□□ 2.98
EIF4A1-206ENST00000577929 PBRM1Q86U86 1689 aa33.68■■■□□ 2.98
EIF4A1-206ENST00000577929 ABCA10Q8WWZ4 1543 aa33.59■■■□□ 2.97
EIF4A1-206ENST00000577929 WRNQ14191 1432 aaPredicted RBP eCLIP33.53■■■□□ 2.961e-6■□□□□ 9.1
EIF4A1-206ENST00000577929 ABCA5Q8WWZ7 1642 aa33.53■■■□□ 2.96
EIF4A1-206ENST00000577929 GRIN2AQ12879 1464 aa33.38■■■□□ 2.93
EIF4A1-206ENST00000577929 TOP2BQ02880 1626 aa33.38■■■□□ 2.93
EIF4A1-206ENST00000577929 BIVM-ERCC5R4GMW8 1640 aa33.36■■■□□ 2.93
EIF4A1-206ENST00000577929 ADAMTS12P58397 1594 aa33.31■■■□□ 2.92
EIF4A1-206ENST00000577929 FHAD1B1AJZ9 1412 aa33.28■■■□□ 2.92
EIF4A1-206ENST00000577929 CEP170Q5SW79 1584 aa33.24■■■□□ 2.91
EIF4A1-206ENST00000577929 ERCC6L2Q5T890 1561 aa33.22■■■□□ 2.91
EIF4A1-206ENST00000577929 NUP160Q12769 1436 aa33.21■■■□□ 2.91
EIF4A1-206ENST00000577929 ERICH3Q5RHP9 1530 aa33.18■■■□□ 2.9
EIF4A1-206ENST00000577929 SHROOM2Q13796 1616 aa33.06■■■□□ 2.88
EIF4A1-206ENST00000577929 PRG4Q92954 1404 aaPredicted RBP33.03■■■□□ 2.88
EIF4A1-206ENST00000577929 AEBP2Q6ZN18 517 aaPredicted RBP33.03■■■□□ 2.88
EIF4A1-206ENST00000577929 JPH4Q96JJ6 628 aa33.03■■■□□ 2.88
EIF4A1-206ENST00000577929 NPM1P06748 294 aaKnown RBP eCLIP32.88■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms