RNA–Protein interactions for RNA: ENST00000457845.4

TRAPPC12-212, Transcript of trafficking protein particle complex 12, humanhuman

TSL 4

Gene TRAPPC12, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-212ENST00000457845 NISCHQ9Y2I1 1504 aa28.24■■■□□ 2.11
TRAPPC12-212ENST00000457845 CCDC180Q9P1Z9 1646 aa25.04■■□□□ 1.6
TRAPPC12-212ENST00000457845 ABCC9O60706 1549 aa24.1■■□□□ 1.45
TRAPPC12-212ENST00000457845 ZCCHC6Q5VYS8 1495 aaKnown RBP23.59■■□□□ 1.37
TRAPPC12-212ENST00000457845 NACADO15069 1562 aa23.44■■□□□ 1.34
TRAPPC12-212ENST00000457845 MYO15BQ96JP2 1530 aa23.43■■□□□ 1.34
TRAPPC12-212ENST00000457845 DCAF1Q9Y4B6 1507 aa23.43■■□□□ 1.34
TRAPPC12-212ENST00000457845 RB1CC1Q8TDY2 1594 aa23.37■■□□□ 1.33
TRAPPC12-212ENST00000457845 DCAF8L2P0C7V8 631 aa23.33■■□□□ 1.33
TRAPPC12-212ENST00000457845 UNC13AQ9UPW8 1703 aa22.96■■□□□ 1.27
TRAPPC12-212ENST00000457845 SCRIBQ14160 1630 aa22.77■■□□□ 1.24
TRAPPC12-212ENST00000457845 BICRAQ9NZM4 1560 aa22.69■■□□□ 1.22
TRAPPC12-212ENST00000457845 PABPN1Q86U42 306 aaKnown RBP eCLIP22.53■■□□□ 1.2
TRAPPC12-212ENST00000457845 SHROOM4Q9ULL8 1493 aa22.47■■□□□ 1.19
TRAPPC12-212ENST00000457845 EIF4G1Q04637 1599 aaKnown RBP22.04■■□□□ 1.12
TRAPPC12-212ENST00000457845 CECR2Q9BXF3 1484 aa21.95■■□□□ 1.1
TRAPPC12-212ENST00000457845 DNAJC5BQ9UF47 199 aa21.88■■□□□ 1.09
TRAPPC12-212ENST00000457845 CC2D2AQ9P2K1 1620 aa21.88■■□□□ 1.09
TRAPPC12-212ENST00000457845 SMARCA4P51532 1647 aa21.87■■□□□ 1.09
TRAPPC12-212ENST00000457845 BAZ1AQ9NRL2 1556 aaPredicted RBP21.87■■□□□ 1.09
TRAPPC12-212ENST00000457845 MROH2BQ7Z745 1585 aa21.75■■□□□ 1.07
TRAPPC12-212ENST00000457845 PEG3Q9GZU2 1588 aa21.69■■□□□ 1.06
TRAPPC12-212ENST00000457845 SMARCA2P51531 1590 aa21.65■■□□□ 1.06
TRAPPC12-212ENST00000457845 ATAD2BQ9ULI0 1458 aa21.64■■□□□ 1.06
TRAPPC12-212ENST00000457845 NCAPD3P42695 1498 aa21.62■■□□□ 1.05
TRAPPC12-212ENST00000457845 RSF1Q96T23 1441 aaPredicted RBP21.6■■□□□ 1.05
TRAPPC12-212ENST00000457845 WIZO95785 1651 aa21.56■■□□□ 1.04
TRAPPC12-212ENST00000457845 HMGXB3Q12766 1538 aa21.55■■□□□ 1.04
TRAPPC12-212ENST00000457845 BAZ1BQ9UIG0 1483 aaKnown RBP21.45■■□□□ 1.03
TRAPPC12-212ENST00000457845 TOP2AP11388 1531 aaKnown RBP21.33■■□□□ 1
TRAPPC12-212ENST00000457845 SUPT5HO00267 1087 aaKnown RBP21.17■□□□□ 0.98
TRAPPC12-212ENST00000457845 CCDC88BA6NC98 1476 aa21.07■□□□□ 0.96
TRAPPC12-212ENST00000457845 LAMC3Q9Y6N6 1575 aa21.01■□□□□ 0.95
TRAPPC12-212ENST00000457845 CADPSQ9ULU8 1353 aa20.97■□□□□ 0.95
TRAPPC12-212ENST00000457845 NESP48681 1621 aa20.96■□□□□ 0.95
TRAPPC12-212ENST00000457845 CFTRP13569 1480 aa20.93■□□□□ 0.94
TRAPPC12-212ENST00000457845 PRDM2Q13029 1718 aa20.9■□□□□ 0.94
TRAPPC12-212ENST00000457845 PDS5BQ9NTI5 1447 aa20.8■□□□□ 0.92
TRAPPC12-212ENST00000457845 KIF21AQ7Z4S6 1674 aa20.79■□□□□ 0.92
TRAPPC12-212ENST00000457845 ERCC6Q03468 1493 aa20.72■□□□□ 0.91
TRAPPC12-212ENST00000457845 FANCD2Q9BXW9 1451 aa20.71■□□□□ 0.91
TRAPPC12-212ENST00000457845 CEP164Q9UPV0 1460 aa20.66■□□□□ 0.9
TRAPPC12-212ENST00000457845 THOC2Q8NI27 1593 aaKnown RBP20.64■□□□□ 0.9
TRAPPC12-212ENST00000457845 MRC2Q9UBG0 1479 aa20.57■□□□□ 0.88
TRAPPC12-212ENST00000457845 WDR62O43379 1518 aa20.53■□□□□ 0.88
TRAPPC12-212ENST00000457845 URB2Q14146 1524 aaKnown RBP20.51■□□□□ 0.87
TRAPPC12-212ENST00000457845 CUX2O14529 1486 aa20.47■□□□□ 0.87
TRAPPC12-212ENST00000457845 ABCC8Q09428 1581 aa20.46■□□□□ 0.87
TRAPPC12-212ENST00000457845 DNMBPQ6XZF7 1577 aa20.45■□□□□ 0.86
TRAPPC12-212ENST00000457845 TOPBP1Q92547 1522 aa20.43■□□□□ 0.86
TRAPPC12-212ENST00000457845 CUX1P39880 1505 aa20.39■□□□□ 0.85
TRAPPC12-212ENST00000457845 WRNQ14191 1432 aaPredicted RBP eCLIP20.34■□□□□ 0.85
TRAPPC12-212ENST00000457845 BIVM-ERCC5R4GMW8 1640 aa20.34■□□□□ 0.85
TRAPPC12-212ENST00000457845 TOP2BQ02880 1626 aa20.32■□□□□ 0.84
TRAPPC12-212ENST00000457845 SYNJ1O43426 1573 aa20.31■□□□□ 0.84
TRAPPC12-212ENST00000457845 POLA1P09884 1462 aaPredicted RBP20.28■□□□□ 0.84
TRAPPC12-212ENST00000457845 FGD5Q6ZNL6 1462 aa20.26■□□□□ 0.83
TRAPPC12-212ENST00000457845 TARBP1Q13395 1621 aaKnown RBP20.24■□□□□ 0.83
TRAPPC12-212ENST00000457845 IFT140Q96RY7 1462 aa20.22■□□□□ 0.83
TRAPPC12-212ENST00000457845 SOGA1O94964 1423 aa20.18■□□□□ 0.82
TRAPPC12-212ENST00000457845 WDR97A6NE52 1622 aa20.16■□□□□ 0.82
TRAPPC12-212ENST00000457845 RAD54L2Q9Y4B4 1467 aa20.16■□□□□ 0.82
TRAPPC12-212ENST00000457845 ABCA10Q8WWZ4 1543 aa20.11■□□□□ 0.81
TRAPPC12-212ENST00000457845 ZNF608Q9ULD9 1512 aaPredicted RBP20.1■□□□□ 0.81
TRAPPC12-212ENST00000457845 EIF4G3O43432 1585 aaKnown RBP20.06■□□□□ 0.8
TRAPPC12-212ENST00000457845 ABCA5Q8WWZ7 1642 aa20.02■□□□□ 0.8
TRAPPC12-212ENST00000457845 AQRO60306 1485 aaKnown RBP eCLIP20.01■□□□□ 0.796e-6■■■■□ 25.1
TRAPPC12-212ENST00000457845 TRIM41Q8WV44 630 aa20.01■□□□□ 0.79
TRAPPC12-212ENST00000457845 TDRD9Q8NDG6 1382 aaKnown RBP20■□□□□ 0.79
TRAPPC12-212ENST00000457845 CHIC1Q5VXU3 224 aa19.99■□□□□ 0.79
TRAPPC12-212ENST00000457845 PBRM1Q86U86 1689 aa19.97■□□□□ 0.79
TRAPPC12-212ENST00000457845 GAPVD1Q14C86 1478 aa19.96■□□□□ 0.79
TRAPPC12-212ENST00000457845 GRIN2BQ13224 1484 aa19.92■□□□□ 0.78
TRAPPC12-212ENST00000457845 KIF27Q86VH2 1401 aa19.88■□□□□ 0.77
TRAPPC12-212ENST00000457845 ERICH3Q5RHP9 1530 aa19.87■□□□□ 0.77
TRAPPC12-212ENST00000457845 MAGI1Q96QZ7 1491 aaPredicted RBP19.85■□□□□ 0.77
TRAPPC12-212ENST00000457845 SNAPC4Q5SXM2 1469 aa19.83■□□□□ 0.76
TRAPPC12-212ENST00000457845 RUSC2Q8N2Y8 1516 aa19.81■□□□□ 0.76
TRAPPC12-212ENST00000457845 CHD1O14646 1710 aa19.79■□□□□ 0.76
TRAPPC12-212ENST00000457845 IGF1RP08069 1367 aa19.79■□□□□ 0.76
TRAPPC12-212ENST00000457845 ADAMTS12P58397 1594 aa19.78■□□□□ 0.76
TRAPPC12-212ENST00000457845 CUL7Q14999 1698 aa19.77■□□□□ 0.76
TRAPPC12-212ENST00000457845 SYNJ2O15056 1496 aa19.76■□□□□ 0.75
TRAPPC12-212ENST00000457845 FHAD1B1AJZ9 1412 aa19.74■□□□□ 0.75
TRAPPC12-212ENST00000457845 EEA1Q15075 1411 aa19.72■□□□□ 0.75
TRAPPC12-212ENST00000457845 CHMP7Q8WUX9 453 aaPredicted RBP19.67■□□□□ 0.74
TRAPPC12-212ENST00000457845 GRIN2AQ12879 1464 aa19.67■□□□□ 0.74
TRAPPC12-212ENST00000457845 CARMIL1Q5VZK9 1371 aa19.66■□□□□ 0.74
TRAPPC12-212ENST00000457845 FBLN2P98095 1184 aa19.64■□□□□ 0.73
TRAPPC12-212ENST00000457845 OSCARQ8IYS5 282 aa19.63■□□□□ 0.73
TRAPPC12-212ENST00000457845 CSRNP3Q8WYN3 585 aa19.62■□□□□ 0.73
TRAPPC12-212ENST00000457845 PRXQ9BXM0 1461 aa19.61■□□□□ 0.73
TRAPPC12-212ENST00000457845 RAPGEF2Q9Y4G8 1499 aa19.59■□□□□ 0.73
TRAPPC12-212ENST00000457845 NUP160Q12769 1436 aa19.59■□□□□ 0.73
TRAPPC12-212ENST00000457845 CEP170Q5SW79 1584 aa19.57■□□□□ 0.72
TRAPPC12-212ENST00000457845 CLASP1Q7Z460 1538 aa19.56■□□□□ 0.72
TRAPPC12-212ENST00000457845 FAM9AQ8IZU1 332 aaPredicted RBP19.54■□□□□ 0.72
TRAPPC12-212ENST00000457845 KIF21BO75037 1637 aa19.53■□□□□ 0.72
TRAPPC12-212ENST00000457845 DNAJC5Q9H3Z4 198 aa19.49■□□□□ 0.71
TRAPPC12-212ENST00000457845 CTTNBP2Q8WZ74 1663 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms