RNA–Protein interactions for RNA: ENST00000421164.5

AFG3L1P-204, Transcript of AFG3 like matrix AAA peptidase subunit 1, pseudogene, humanhuman

TSL 1 (best)

Gene AFG3L1P, Length 1,706 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFG3L1P-204ENST00000421164 NISCHQ9Y2I1 1504 aa41.08■■■■■ 4.17
AFG3L1P-204ENST00000421164 CCDC180Q9P1Z9 1646 aa36.07■■■■□ 3.37
AFG3L1P-204ENST00000421164 ABCC9O60706 1549 aa34.85■■■■□ 3.17
AFG3L1P-204ENST00000421164 ZCCHC6Q5VYS8 1495 aaKnown RBP34.35■■■■□ 3.09
AFG3L1P-204ENST00000421164 DCAF8L2P0C7V8 631 aa34.18■■■■□ 3.06
AFG3L1P-204ENST00000421164 DCAF1Q9Y4B6 1507 aa33.93■■■■□ 3.02
AFG3L1P-204ENST00000421164 NACADO15069 1562 aa33.81■■■■□ 3
AFG3L1P-204ENST00000421164 MYO15BQ96JP2 1530 aa33.8■■■■□ 3
AFG3L1P-204ENST00000421164 RB1CC1Q8TDY2 1594 aa33.68■■■□□ 2.98
AFG3L1P-204ENST00000421164 SCRIBQ14160 1630 aa33.12■■■□□ 2.89
AFG3L1P-204ENST00000421164 SHROOM4Q9ULL8 1493 aa33.02■■■□□ 2.88
AFG3L1P-204ENST00000421164 UNC13AQ9UPW8 1703 aa32.95■■■□□ 2.87
AFG3L1P-204ENST00000421164 PABPN1Q86U42 306 aaKnown RBP eCLIP32.77■■■□□ 2.84
AFG3L1P-204ENST00000421164 BICRAQ9NZM4 1560 aa32.74■■■□□ 2.83
AFG3L1P-204ENST00000421164 CECR2Q9BXF3 1484 aa32.02■■■□□ 2.72
AFG3L1P-204ENST00000421164 EIF4G1Q04637 1599 aaKnown RBP31.78■■■□□ 2.68
AFG3L1P-204ENST00000421164 BAZ1AQ9NRL2 1556 aaPredicted RBP31.73■■■□□ 2.67
AFG3L1P-204ENST00000421164 MROH2BQ7Z745 1585 aa31.72■■■□□ 2.67
AFG3L1P-204ENST00000421164 SMARCA4P51532 1647 aa31.7■■■□□ 2.67
AFG3L1P-204ENST00000421164 RSF1Q96T23 1441 aaPredicted RBP31.61■■■□□ 2.65
AFG3L1P-204ENST00000421164 DNAJC5BQ9UF47 199 aa31.51■■■□□ 2.63
AFG3L1P-204ENST00000421164 CC2D2AQ9P2K1 1620 aa31.5■■■□□ 2.63
AFG3L1P-204ENST00000421164 SUPT5HO00267 1087 aaKnown RBP31.41■■■□□ 2.62
AFG3L1P-204ENST00000421164 ATAD2BQ9ULI0 1458 aa31.4■■■□□ 2.62
AFG3L1P-204ENST00000421164 WIZO95785 1651 aa31.39■■■□□ 2.62
AFG3L1P-204ENST00000421164 PEG3Q9GZU2 1588 aa31.35■■■□□ 2.61
AFG3L1P-204ENST00000421164 SMARCA2P51531 1590 aa31.31■■■□□ 2.6
AFG3L1P-204ENST00000421164 NCAPD3P42695 1498 aa31.26■■■□□ 2.59
AFG3L1P-204ENST00000421164 BAZ1BQ9UIG0 1483 aaKnown RBP31.15■■■□□ 2.58
AFG3L1P-204ENST00000421164 HMGXB3Q12766 1538 aa31.1■■■□□ 2.57
AFG3L1P-204ENST00000421164 TOP2AP11388 1531 aaKnown RBP31.03■■■□□ 2.56
AFG3L1P-204ENST00000421164 CCDC88BA6NC98 1476 aa30.75■■■□□ 2.51
AFG3L1P-204ENST00000421164 CADPSQ9ULU8 1353 aa30.4■■■□□ 2.46
AFG3L1P-204ENST00000421164 NESP48681 1621 aa30.39■■■□□ 2.46
AFG3L1P-204ENST00000421164 CFTRP13569 1480 aa30.35■■■□□ 2.45
AFG3L1P-204ENST00000421164 LAMC3Q9Y6N6 1575 aa30.25■■■□□ 2.43
AFG3L1P-204ENST00000421164 PDS5BQ9NTI5 1447 aa30.07■■■□□ 2.4
AFG3L1P-204ENST00000421164 FANCD2Q9BXW9 1451 aa30.05■■■□□ 2.4
AFG3L1P-204ENST00000421164 PRDM2Q13029 1718 aa30.02■■■□□ 2.4
AFG3L1P-204ENST00000421164 KIF21AQ7Z4S6 1674 aa29.94■■■□□ 2.38
AFG3L1P-204ENST00000421164 ERCC6Q03468 1493 aa29.91■■■□□ 2.38
AFG3L1P-204ENST00000421164 CEP164Q9UPV0 1460 aa29.91■■■□□ 2.38
AFG3L1P-204ENST00000421164 ABCC8Q09428 1581 aa29.85■■■□□ 2.37
AFG3L1P-204ENST00000421164 WRNQ14191 1432 aaPredicted RBP eCLIP29.74■■■□□ 2.35
AFG3L1P-204ENST00000421164 URB2Q14146 1524 aaKnown RBP29.74■■■□□ 2.35
AFG3L1P-204ENST00000421164 MRC2Q9UBG0 1479 aa29.73■■■□□ 2.35
AFG3L1P-204ENST00000421164 CHIC1Q5VXU3 224 aa29.71■■■□□ 2.35
AFG3L1P-204ENST00000421164 CUX1P39880 1505 aa29.71■■■□□ 2.35
AFG3L1P-204ENST00000421164 THOC2Q8NI27 1593 aaKnown RBP29.67■■■□□ 2.34
AFG3L1P-204ENST00000421164 SYNJ1O43426 1573 aa29.65■■■□□ 2.34
AFG3L1P-204ENST00000421164 TOPBP1Q92547 1522 aa29.64■■■□□ 2.34
AFG3L1P-204ENST00000421164 DNMBPQ6XZF7 1577 aa29.61■■■□□ 2.33
AFG3L1P-204ENST00000421164 WDR62O43379 1518 aa29.59■■■□□ 2.33
AFG3L1P-204ENST00000421164 TRIM41Q8WV44 630 aa29.57■■■□□ 2.32
AFG3L1P-204ENST00000421164 TOP2BQ02880 1626 aa29.56■■■□□ 2.32
AFG3L1P-204ENST00000421164 BIVM-ERCC5R4GMW8 1640 aa29.52■■■□□ 2.32
AFG3L1P-204ENST00000421164 FGD5Q6ZNL6 1462 aa29.47■■■□□ 2.31
AFG3L1P-204ENST00000421164 POLA1P09884 1462 aaPredicted RBP29.45■■■□□ 2.31
AFG3L1P-204ENST00000421164 CUX2O14529 1486 aa29.4■■■□□ 2.3
AFG3L1P-204ENST00000421164 RAD54L2Q9Y4B4 1467 aa29.38■■■□□ 2.29
AFG3L1P-204ENST00000421164 SOGA1O94964 1423 aa29.36■■■□□ 2.29
AFG3L1P-204ENST00000421164 TARBP1Q13395 1621 aaKnown RBP29.25■■■□□ 2.27
AFG3L1P-204ENST00000421164 IFT140Q96RY7 1462 aa29.25■■■□□ 2.27
AFG3L1P-204ENST00000421164 ABCA10Q8WWZ4 1543 aa29.19■■■□□ 2.26
AFG3L1P-204ENST00000421164 TDRD9Q8NDG6 1382 aaKnown RBP29.16■■■□□ 2.26
AFG3L1P-204ENST00000421164 ZNF608Q9ULD9 1512 aaPredicted RBP29.16■■■□□ 2.26
AFG3L1P-204ENST00000421164 RUSC2Q8N2Y8 1516 aa29.13■■■□□ 2.25
AFG3L1P-204ENST00000421164 WDR97A6NE52 1622 aa29.12■■■□□ 2.25
AFG3L1P-204ENST00000421164 AQRO60306 1485 aaKnown RBP eCLIP29.1■■■□□ 2.252e-8■■■■□ 23.2
AFG3L1P-204ENST00000421164 KIF27Q86VH2 1401 aa29.05■■■□□ 2.24
AFG3L1P-204ENST00000421164 FAM9AQ8IZU1 332 aaPredicted RBP29.03■■■□□ 2.24
AFG3L1P-204ENST00000421164 GAPVD1Q14C86 1478 aa29■■■□□ 2.23
AFG3L1P-204ENST00000421164 ABCA5Q8WWZ7 1642 aa29■■■□□ 2.23
AFG3L1P-204ENST00000421164 EIF4G3O43432 1585 aaKnown RBP28.98■■■□□ 2.23
AFG3L1P-204ENST00000421164 IGF1RP08069 1367 aa28.92■■■□□ 2.22
AFG3L1P-204ENST00000421164 EEA1Q15075 1411 aa28.88■■■□□ 2.21
AFG3L1P-204ENST00000421164 GRIN2BQ13224 1484 aa28.88■■■□□ 2.21
AFG3L1P-204ENST00000421164 CSRNP3Q8WYN3 585 aa28.88■■■□□ 2.21
AFG3L1P-204ENST00000421164 PBRM1Q86U86 1689 aa28.82■■■□□ 2.2
AFG3L1P-204ENST00000421164 ERICH3Q5RHP9 1530 aa28.82■■■□□ 2.2
AFG3L1P-204ENST00000421164 SNAPC4Q5SXM2 1469 aa28.78■■■□□ 2.2
AFG3L1P-204ENST00000421164 CARMIL1Q5VZK9 1371 aa28.74■■■□□ 2.19
AFG3L1P-204ENST00000421164 MAGI1Q96QZ7 1491 aaPredicted RBP28.7■■■□□ 2.18
AFG3L1P-204ENST00000421164 PRXQ9BXM0 1461 aa28.69■■■□□ 2.18
AFG3L1P-204ENST00000421164 FHAD1B1AJZ9 1412 aa28.68■■■□□ 2.18
AFG3L1P-204ENST00000421164 ADAMTS12P58397 1594 aa28.67■■■□□ 2.18
AFG3L1P-204ENST00000421164 EHMT2Q96KQ7 1210 aa28.66■■■□□ 2.18
AFG3L1P-204ENST00000421164 CUL7Q14999 1698 aa28.65■■■□□ 2.18
AFG3L1P-204ENST00000421164 FBLN2P98095 1184 aa28.63■■■□□ 2.17
AFG3L1P-204ENST00000421164 SYNJ2O15056 1496 aa28.61■■■□□ 2.17
AFG3L1P-204ENST00000421164 CHMP7Q8WUX9 453 aaPredicted RBP28.6■■■□□ 2.17
AFG3L1P-204ENST00000421164 RAPGEF2Q9Y4G8 1499 aa28.6■■■□□ 2.17
AFG3L1P-204ENST00000421164 LOC105371045A0A1W2PR82 267 aa28.57■■■□□ 2.16
AFG3L1P-204ENST00000421164 KIF21BO75037 1637 aa28.54■■■□□ 2.16
AFG3L1P-204ENST00000421164 GRIN2AQ12879 1464 aa28.53■■■□□ 2.16
AFG3L1P-204ENST00000421164 GOLGA3Q08378 1498 aa28.47■■■□□ 2.15
AFG3L1P-204ENST00000421164 CHD1O14646 1710 aa28.47■■■□□ 2.15
AFG3L1P-204ENST00000421164 UBTFP17480 764 aaKnown RBP28.42■■■□□ 2.14
AFG3L1P-204ENST00000421164 CEP170Q5SW79 1584 aa28.37■■■□□ 2.13
AFG3L1P-204ENST00000421164 NUP160Q12769 1436 aa28.37■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms