RNA–Protein interactions for RNA: ENST00000469147.5

TRAPPC12-215, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 1,002 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-215ENST00000469147 NISCHQ9Y2I1 1504 aa23.17■■□□□ 1.3
TRAPPC12-215ENST00000469147 CCDC180Q9P1Z9 1646 aa20.54■□□□□ 0.88
TRAPPC12-215ENST00000469147 ABCC9O60706 1549 aa20.46■□□□□ 0.87
TRAPPC12-215ENST00000469147 DCAF8L2P0C7V8 631 aa19.5■□□□□ 0.71
TRAPPC12-215ENST00000469147 RB1CC1Q8TDY2 1594 aa19.43■□□□□ 0.7
TRAPPC12-215ENST00000469147 NACADO15069 1562 aa19.36■□□□□ 0.69
TRAPPC12-215ENST00000469147 ZCCHC6Q5VYS8 1495 aaKnown RBP19.28■□□□□ 0.68
TRAPPC12-215ENST00000469147 MYO15BQ96JP2 1530 aa19.22■□□□□ 0.67
TRAPPC12-215ENST00000469147 UNC13AQ9UPW8 1703 aa19.18■□□□□ 0.66
TRAPPC12-215ENST00000469147 DNAJC5BQ9UF47 199 aa19.18■□□□□ 0.66
TRAPPC12-215ENST00000469147 DCAF1Q9Y4B6 1507 aa19.18■□□□□ 0.66
TRAPPC12-215ENST00000469147 PABPN1Q86U42 306 aaKnown RBP eCLIP19.17■□□□□ 0.66
TRAPPC12-215ENST00000469147 BICRAQ9NZM4 1560 aa19.05■□□□□ 0.64
TRAPPC12-215ENST00000469147 SCRIBQ14160 1630 aa18.89■□□□□ 0.62
TRAPPC12-215ENST00000469147 SHROOM4Q9ULL8 1493 aa18.52■□□□□ 0.55
TRAPPC12-215ENST00000469147 CC2D2AQ9P2K1 1620 aa18.46■□□□□ 0.55
TRAPPC12-215ENST00000469147 EIF4G1Q04637 1599 aaKnown RBP18.46■□□□□ 0.55
TRAPPC12-215ENST00000469147 CECR2Q9BXF3 1484 aa18.39■□□□□ 0.53
TRAPPC12-215ENST00000469147 SMARCA4P51532 1647 aa18.01■□□□□ 0.47
TRAPPC12-215ENST00000469147 ATAD2BQ9ULI0 1458 aa17.98■□□□□ 0.47
TRAPPC12-215ENST00000469147 MROH2BQ7Z745 1585 aa17.95■□□□□ 0.46
TRAPPC12-215ENST00000469147 NCAPD3P42695 1498 aa17.94■□□□□ 0.46
TRAPPC12-215ENST00000469147 BAZ1AQ9NRL2 1556 aaPredicted RBP17.91■□□□□ 0.46
TRAPPC12-215ENST00000469147 SMARCA2P51531 1590 aa17.81■□□□□ 0.44
TRAPPC12-215ENST00000469147 PEG3Q9GZU2 1588 aa17.78■□□□□ 0.44
TRAPPC12-215ENST00000469147 HMGXB3Q12766 1538 aa17.77■□□□□ 0.44
TRAPPC12-215ENST00000469147 DNAJC5Q9H3Z4 198 aa17.76■□□□□ 0.43
TRAPPC12-215ENST00000469147 BAZ1BQ9UIG0 1483 aaKnown RBP17.75■□□□□ 0.43
TRAPPC12-215ENST00000469147 WIZO95785 1651 aa17.74■□□□□ 0.43
TRAPPC12-215ENST00000469147 ERCC6Q03468 1493 aa17.73■□□□□ 0.43
TRAPPC12-215ENST00000469147 NESP48681 1621 aa17.72■□□□□ 0.43
TRAPPC12-215ENST00000469147 RSF1Q96T23 1441 aaPredicted RBP17.65■□□□□ 0.42
TRAPPC12-215ENST00000469147 CUX2O14529 1486 aa17.57■□□□□ 0.4
TRAPPC12-215ENST00000469147 TOP2AP11388 1531 aaKnown RBP17.45■□□□□ 0.38
TRAPPC12-215ENST00000469147 KIF21AQ7Z4S6 1674 aa17.43■□□□□ 0.38
TRAPPC12-215ENST00000469147 CADPSQ9ULU8 1353 aa17.42■□□□□ 0.38
TRAPPC12-215ENST00000469147 LAMC3Q9Y6N6 1575 aa17.42■□□□□ 0.38
TRAPPC12-215ENST00000469147 THOC2Q8NI27 1593 aaKnown RBP17.38■□□□□ 0.37
TRAPPC12-215ENST00000469147 PDS5BQ9NTI5 1447 aa17.32■□□□□ 0.36
TRAPPC12-215ENST00000469147 CCDC88BA6NC98 1476 aa17.31■□□□□ 0.36
TRAPPC12-215ENST00000469147 CFTRP13569 1480 aa17.28■□□□□ 0.36
TRAPPC12-215ENST00000469147 SUPT5HO00267 1087 aaKnown RBP17.23■□□□□ 0.35
TRAPPC12-215ENST00000469147 FANCD2Q9BXW9 1451 aa17.23■□□□□ 0.35
TRAPPC12-215ENST00000469147 MRC2Q9UBG0 1479 aa17.19■□□□□ 0.34
TRAPPC12-215ENST00000469147 CEP164Q9UPV0 1460 aa17.16■□□□□ 0.34
TRAPPC12-215ENST00000469147 WDR62O43379 1518 aa17.16■□□□□ 0.34
TRAPPC12-215ENST00000469147 URB2Q14146 1524 aaKnown RBP17.15■□□□□ 0.34
TRAPPC12-215ENST00000469147 TRIM41Q8WV44 630 aa17.14■□□□□ 0.33
TRAPPC12-215ENST00000469147 PRDM2Q13029 1718 aa17.08■□□□□ 0.32
TRAPPC12-215ENST00000469147 OSCARQ8IYS5 282 aa16.96■□□□□ 0.31
TRAPPC12-215ENST00000469147 TOPBP1Q92547 1522 aa16.96■□□□□ 0.3
TRAPPC12-215ENST00000469147 ZNF608Q9ULD9 1512 aaPredicted RBP16.92■□□□□ 0.3
TRAPPC12-215ENST00000469147 DNMBPQ6XZF7 1577 aa16.85■□□□□ 0.29
TRAPPC12-215ENST00000469147 RAD54L2Q9Y4B4 1467 aa16.83■□□□□ 0.28
TRAPPC12-215ENST00000469147 CUX1P39880 1505 aa16.82■□□□□ 0.28
TRAPPC12-215ENST00000469147 ABCC8Q09428 1581 aa16.81■□□□□ 0.28
TRAPPC12-215ENST00000469147 POLA1P09884 1462 aaPredicted RBP16.8■□□□□ 0.28
TRAPPC12-215ENST00000469147 IFT140Q96RY7 1462 aa16.8■□□□□ 0.28
TRAPPC12-215ENST00000469147 TARBP1Q13395 1621 aaKnown RBP16.8■□□□□ 0.28
TRAPPC12-215ENST00000469147 AQRO60306 1485 aaKnown RBP eCLIP16.79■□□□□ 0.28
TRAPPC12-215ENST00000469147 FGD5Q6ZNL6 1462 aa16.74■□□□□ 0.27
TRAPPC12-215ENST00000469147 EIF4G3O43432 1585 aaKnown RBP16.72■□□□□ 0.27
TRAPPC12-215ENST00000469147 TDRD9Q8NDG6 1382 aaKnown RBP16.72■□□□□ 0.27
TRAPPC12-215ENST00000469147 SOGA1O94964 1423 aa16.71■□□□□ 0.27
TRAPPC12-215ENST00000469147 FBLN2P98095 1184 aa16.7■□□□□ 0.26
TRAPPC12-215ENST00000469147 WRNQ14191 1432 aaPredicted RBP eCLIP16.64■□□□□ 0.25
TRAPPC12-215ENST00000469147 SYNJ1O43426 1573 aa16.62■□□□□ 0.25
TRAPPC12-215ENST00000469147 WDR97A6NE52 1622 aa16.6■□□□□ 0.25
TRAPPC12-215ENST00000469147 TOP2BQ02880 1626 aa16.59■□□□□ 0.25
TRAPPC12-215ENST00000469147 BIVM-ERCC5R4GMW8 1640 aa16.59■□□□□ 0.25
TRAPPC12-215ENST00000469147 CHD1O14646 1710 aa16.59■□□□□ 0.25
TRAPPC12-215ENST00000469147 CYB5RLQ6IPT4 315 aa16.59■□□□□ 0.25
TRAPPC12-215ENST00000469147 TRHP20396 242 aaPredicted RBP16.56■□□□□ 0.24
TRAPPC12-215ENST00000469147 SNAPC4Q5SXM2 1469 aa16.55■□□□□ 0.24
TRAPPC12-215ENST00000469147 ABCA10Q8WWZ4 1543 aa16.53■□□□□ 0.24
TRAPPC12-215ENST00000469147 RIMBP3CA6NJZ7 1639 aa16.52■□□□□ 0.23
TRAPPC12-215ENST00000469147 RIMBP3BA6NNM3 1639 aa16.52■□□□□ 0.23
TRAPPC12-215ENST00000469147 RIMBP3Q9UFD9 1639 aa16.52■□□□□ 0.23
TRAPPC12-215ENST00000469147 CHMP7Q8WUX9 453 aaPredicted RBP16.5■□□□□ 0.23
TRAPPC12-215ENST00000469147 GAPVD1Q14C86 1478 aa16.49■□□□□ 0.23
TRAPPC12-215ENST00000469147 ABCA5Q8WWZ7 1642 aa16.49■□□□□ 0.23
TRAPPC12-215ENST00000469147 GRIN2BQ13224 1484 aa16.48■□□□□ 0.23
TRAPPC12-215ENST00000469147 PBRM1Q86U86 1689 aa16.48■□□□□ 0.23
TRAPPC12-215ENST00000469147 ARHGEF11O15085 1522 aa16.47■□□□□ 0.23
TRAPPC12-215ENST00000469147 MAGI1Q96QZ7 1491 aaPredicted RBP16.42■□□□□ 0.22
TRAPPC12-215ENST00000469147 SYNJ2O15056 1496 aa16.39■□□□□ 0.21
TRAPPC12-215ENST00000469147 CLASP1Q7Z460 1538 aa16.39■□□□□ 0.21
TRAPPC12-215ENST00000469147 ARAP1Q96P48 1450 aa16.35■□□□□ 0.21
TRAPPC12-215ENST00000469147 ADAMTS12P58397 1594 aa16.34■□□□□ 0.21
TRAPPC12-215ENST00000469147 CEP170Q5SW79 1584 aa16.3■□□□□ 0.2
TRAPPC12-215ENST00000469147 GRIN2AQ12879 1464 aa16.3■□□□□ 0.2
TRAPPC12-215ENST00000469147 ERCC6L2Q5T890 1561 aa16.3■□□□□ 0.2
TRAPPC12-215ENST00000469147 KIF27Q86VH2 1401 aa16.29■□□□□ 0.2
TRAPPC12-215ENST00000469147 ERICH3Q5RHP9 1530 aa16.29■□□□□ 0.2
TRAPPC12-215ENST00000469147 IGF1RP08069 1367 aa16.27■□□□□ 0.2
TRAPPC12-215ENST00000469147 FHAD1B1AJZ9 1412 aa16.27■□□□□ 0.19
TRAPPC12-215ENST00000469147 NUP160Q12769 1436 aa16.26■□□□□ 0.19
TRAPPC12-215ENST00000469147 RUSC2Q8N2Y8 1516 aa16.25■□□□□ 0.19
TRAPPC12-215ENST00000469147 CHIC1Q5VXU3 224 aa16.2■□□□□ 0.18
TRAPPC12-215ENST00000469147 AEBP2Q6ZN18 517 aaPredicted RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms