Protein–RNA interactions for Protein: Q9NR30

DDX21, Nucleolar RNA helicase 2, humanhuman

Known RBP eCLIP

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX21Q9NR30 UBAP2-207ENST00000421278 833 ntTSL 56.47□□□□□ -1.373e-8■■□□□ 12.6
DDX21Q9NR30 GSE1-204ENST00000411612 872 ntTSL 528.36■■■□□ 2.134e-6■■□□□ 12.5
DDX21Q9NR30 GSE1-215ENST00000635906 666 ntTSL 315.61■□□□□ 0.094e-6■■□□□ 12.5
DDX21Q9NR30 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.594e-6■■□□□ 12.4
DDX21Q9NR30 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC26.84■■□□□ 1.894e-7■■□□□ 12.4
DDX21Q9NR30 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC26.47■■□□□ 1.834e-6■■□□□ 12.4
DDX21Q9NR30 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC25.9■■□□□ 1.744e-6■■□□□ 12.4
DDX21Q9NR30 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC25.81■■□□□ 1.724e-8■■□□□ 12.4
DDX21Q9NR30 HSP90B1-202ENST00000540297 590 ntTSL 325.79■■□□□ 1.724e-7■■□□□ 12.4
DDX21Q9NR30 RNASET2-204ENST00000421787 1924 ntTSL 225.57■■□□□ 1.684e-6■■□□□ 12.4
DDX21Q9NR30 TPM4-208ENST00000588410 563 ntTSL 425.41■■□□□ 1.664e-7■■□□□ 12.4
DDX21Q9NR30 TPM4-204ENST00000586499 708 ntTSL 424.77■■□□□ 1.564e-7■■□□□ 12.4
DDX21Q9NR30 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC24.02■■□□□ 1.444e-6■■□□□ 12.4
DDX21Q9NR30 RNASET2-201ENST00000028008 1220 ntTSL 523.74■■□□□ 1.394e-6■■□□□ 12.4
DDX21Q9NR30 RNASET2-207ENST00000478180 963 ntTSL 523.39■■□□□ 1.334e-6■■□□□ 12.4
DDX21Q9NR30 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC23.24■■□□□ 1.314e-7■■□□□ 12.4
DDX21Q9NR30 TPM4-206ENST00000587201 877 ntTSL 223.01■■□□□ 1.274e-7■■□□□ 12.4
DDX21Q9NR30 HSP90B1-205ENST00000549334 581 ntTSL 422.53■■□□□ 1.24e-7■■□□□ 12.4
DDX21Q9NR30 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC22.23■■□□□ 1.154e-7■■□□□ 12.4
DDX21Q9NR30 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.124e-8■■□□□ 12.4
DDX21Q9NR30 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.084e-6■■□□□ 12.4
DDX21Q9NR30 RNASET2-202ENST00000358165 2445 ntTSL 220.86■□□□□ 0.934e-6■■□□□ 12.4
DDX21Q9NR30 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.822e-6■■□□□ 12.4
DDX21Q9NR30 ULK1-205ENST00000541761 1262 ntTSL 220.1■□□□□ 0.814e-8■■□□□ 12.4
DDX21Q9NR30 F11R-206ENST00000621309 4770 ntTSL 5 BASIC19.37■□□□□ 0.692e-6■■□□□ 12.4
DDX21Q9NR30 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.664e-7■■□□□ 12.4
DDX21Q9NR30 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.624e-7■■□□□ 12.4
DDX21Q9NR30 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.574e-8■■□□□ 12.4
DDX21Q9NR30 TPM4-205ENST00000586833 558 ntTSL 518.2■□□□□ 0.54e-7■■□□□ 12.4
DDX21Q9NR30 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.444e-7■■□□□ 12.4
DDX21Q9NR30 HSP90B1-203ENST00000548462 3032 ntTSL 214.03□□□□□ -0.164e-7■■□□□ 12.4
DDX21Q9NR30 RNASET2-209ENST00000499370 2164 ntTSL 212.87□□□□□ -0.354e-6■■□□□ 12.4
DDX21Q9NR30 RNASET2-208ENST00000496851 881 ntTSL 512.59□□□□□ -0.394e-6■■□□□ 12.4
DDX21Q9NR30 TPM4-210ENST00000588507 367 ntTSL 310.42□□□□□ -0.744e-7■■□□□ 12.4
DDX21Q9NR30 STARD7-204ENST00000479456 2949 ntTSL 27.74□□□□□ -1.174e-7■■□□□ 12.4
DDX21Q9NR30 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.274e-6■■□□□ 12.4
DDX21Q9NR30 C22orf34-202ENST00000400023 1469 ntTSL 1 (best)20.43■□□□□ 0.863e-10■■□□□ 12.4
DDX21Q9NR30 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC22.72■■□□□ 1.231e-6■■□□□ 12
DDX21Q9NR30 COPS5-204ENST00000517793 657 ntTSL 518.14■□□□□ 0.491e-6■■□□□ 12
DDX21Q9NR30 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.41e-6■■□□□ 12
DDX21Q9NR30 COPS5-203ENST00000517736 1621 ntTSL 5 BASIC17.02■□□□□ 0.311e-6■■□□□ 12
DDX21Q9NR30 COPS5-206ENST00000518747 676 ntTSL 315.82■□□□□ 0.121e-6■■□□□ 12
DDX21Q9NR30 ERICH1-207ENST00000522893 3170 ntAPPRIS ALT2 TSL 1 (best)15.53■□□□□ 0.081e-6■■□□□ 12
DDX21Q9NR30 COPS5-205ENST00000518374 1451 ntTSL 213.11□□□□□ -0.311e-6■■□□□ 12
DDX21Q9NR30 COPS5-201ENST00000357849 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.61e-6■■□□□ 12
DDX21Q9NR30 COPS5-213ENST00000523890 1086 ntTSL 311.06□□□□□ -0.641e-6■■□□□ 12
DDX21Q9NR30 COPS5-211ENST00000521509 3826 ntTSL 510.81□□□□□ -0.681e-6■■□□□ 12
DDX21Q9NR30 ERICH1-209ENST00000523415 3630 ntTSL 210.03□□□□□ -0.81e-6■■□□□ 12
DDX21Q9NR30 COPS5-210ENST00000521386 5691 ntTSL 1 (best)8.68□□□□□ -1.021e-6■■□□□ 12
DDX21Q9NR30 HSPA8-211ENST00000527983 1509 ntTSL 1 (best)14.92□□□□□ -0.021e-323■■□□□ 11.8
DDX21Q9NR30 HSPA8-209ENST00000526862 504 ntTSL 35.95□□□□□ -1.461e-323■■□□□ 11.8
DDX21Q9NR30 SNORD14C-201ENST00000365382 88 ntBASIC-0.41□□□□□ -2.481e-323■■□□□ 11.8
DDX21Q9NR30 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.058e-8■■□□□ 11.7
DDX21Q9NR30 PRPF8-201ENST00000304992 7295 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.568e-8■■□□□ 11.7
DDX21Q9NR30 SCARNA9-201ENST00000530422 353 ntBASIC9.26□□□□□ -0.931e-72■■□□□ 11.6
DDX21Q9NR30 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.361e-72■■□□□ 11.6
DDX21Q9NR30 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC5.44□□□□□ -1.541e-72■■□□□ 11.6
DDX21Q9NR30 CEP295-203ENST00000530425 1735 ntAPPRIS ALT2 TSL 44.02□□□□□ -1.771e-72■■□□□ 11.6
DDX21Q9NR30 ADGRL4-203ENST00000640664 2223 ntTSL 56.52□□□□□ -1.372e-6■■□□□ 11.4
DDX21Q9NR30 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.72e-6■■□□□ 11.4
DDX21Q9NR30 IGFL2-AS1-201ENST00000594027 294 ntTSL 314.1□□□□□ -0.156e-9■□□□□ 11.2
DDX21Q9NR30 IGFL2-AS1-205ENST00000599817 340 ntTSL 213.99□□□□□ -0.176e-9■□□□□ 11.2
DDX21Q9NR30 IGFL2-AS1-203ENST00000598518 1037 ntTSL 1 (best) BASIC13.52□□□□□ -0.256e-9■□□□□ 11.2
DDX21Q9NR30 CTNND1-238ENST00000534647 866 ntTSL 515.15■□□□□ 0.024e-6■□□□□ 11.2
DDX21Q9NR30 CTNND1-235ENST00000533189 498 ntTSL 314.31□□□□□ -0.124e-6■□□□□ 11.2
DDX21Q9NR30 MDH1-202ENST00000409476 808 ntTSL 5 BASIC13.93□□□□□ -0.184e-6■□□□□ 11.2
DDX21Q9NR30 MDH1-203ENST00000409908 700 ntTSL 3 BASIC13.93□□□□□ -0.184e-6■□□□□ 11.2
DDX21Q9NR30 MDH1-216ENST00000544381 1346 ntTSL 2 BASIC12.61□□□□□ -0.394e-6■□□□□ 11.2
DDX21Q9NR30 MDH1-215ENST00000539945 1443 ntTSL 2 BASIC12.13□□□□□ -0.474e-6■□□□□ 11.2
DDX21Q9NR30 MDH1-205ENST00000432309 844 ntTSL 511.97□□□□□ -0.494e-6■□□□□ 11.2
DDX21Q9NR30 MDH1-201ENST00000233114 1650 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.54e-6■□□□□ 11.2
DDX21Q9NR30 CTNND1-210ENST00000524630 6553 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.64e-6■□□□□ 11.2
DDX21Q9NR30 CTNND1-215ENST00000526938 3489 ntTSL 5 BASIC10.5□□□□□ -0.734e-6■□□□□ 11.2
DDX21Q9NR30 CTNND1-213ENST00000526357 5994 ntTSL 1 (best) BASIC10.48□□□□□ -0.734e-6■□□□□ 11.2
DDX21Q9NR30 CTNND1-232ENST00000532649 6026 ntTSL 1 (best) BASIC10.08□□□□□ -0.84e-6■□□□□ 11.2
DDX21Q9NR30 CTNND1-237ENST00000534579 6024 ntTSL 5 BASIC10.08□□□□□ -0.84e-6■□□□□ 11.2
DDX21Q9NR30 CTNND1-208ENST00000428599 6016 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.84e-6■□□□□ 11.2
DDX21Q9NR30 CTNND1-201ENST00000358694 6135 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.834e-6■□□□□ 11.2
DDX21Q9NR30 CTNND1-206ENST00000415361 5832 ntTSL 1 (best) BASIC9.71□□□□□ -0.864e-6■□□□□ 11.2
DDX21Q9NR30 CTNND1-225ENST00000530094 5814 ntTSL 1 (best) BASIC9.71□□□□□ -0.864e-6■□□□□ 11.2
DDX21Q9NR30 CTNND1-205ENST00000399050 6313 ntTSL 1 (best) BASIC9.63□□□□□ -0.874e-6■□□□□ 11.2
DDX21Q9NR30 CTNND1-219ENST00000528621 5907 ntTSL 1 (best) BASIC9.6□□□□□ -0.874e-6■□□□□ 11.2
DDX21Q9NR30 CTNND1-227ENST00000530748 5925 ntTSL 1 (best) BASIC9.56□□□□□ -0.884e-6■□□□□ 11.2
DDX21Q9NR30 CTNND1-221ENST00000529873 5931 ntTSL 1 (best) BASIC9.56□□□□□ -0.884e-6■□□□□ 11.2
DDX21Q9NR30 CTNND1-230ENST00000532245 5655 ntTSL 1 (best) BASIC9.44□□□□□ -0.94e-6■□□□□ 11.2
DDX21Q9NR30 CTNND1-202ENST00000361332 6295 ntTSL 1 (best) BASIC9.22□□□□□ -0.934e-6■□□□□ 11.2
DDX21Q9NR30 CTNND1-220ENST00000529526 6099 ntTSL 1 (best) BASIC9.16□□□□□ -0.944e-6■□□□□ 11.2
DDX21Q9NR30 CTNND1-231ENST00000532463 5749 ntTSL 1 (best) BASIC9.14□□□□□ -0.954e-6■□□□□ 11.2
DDX21Q9NR30 CTNND1-234ENST00000532844 6012 ntTSL 1 (best) BASIC9.12□□□□□ -0.954e-6■□□□□ 11.2
DDX21Q9NR30 CTNND1-207ENST00000426142 5800 ntTSL 1 (best) BASIC9.05□□□□□ -0.964e-6■□□□□ 11.2
DDX21Q9NR30 CTNND1-222ENST00000529919 4780 ntTSL 5 BASIC9.04□□□□□ -0.964e-6■□□□□ 11.2
DDX21Q9NR30 MDH1-206ENST00000436321 680 ntTSL 38.98□□□□□ -0.974e-6■□□□□ 11.2
DDX21Q9NR30 CTNND1-203ENST00000361391 6232 ntTSL 1 (best) BASIC8.95□□□□□ -0.984e-6■□□□□ 11.2
DDX21Q9NR30 CTNND1-204ENST00000361796 6226 ntTSL 1 (best) BASIC8.95□□□□□ -0.984e-6■□□□□ 11.2
DDX21Q9NR30 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC8.56□□□□□ -1.044e-6■□□□□ 11.2
DDX21Q9NR30 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC8.44□□□□□ -1.064e-6■□□□□ 11.2
DDX21Q9NR30 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC8.28□□□□□ -1.084e-6■□□□□ 11.2
DDX21Q9NR30 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC8.1□□□□□ -1.114e-6■□□□□ 11.2
DDX21Q9NR30 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC8.1□□□□□ -1.114e-6■□□□□ 11.2
DDX21Q9NR30 MDH1-211ENST00000484538 910 ntTSL 27.99□□□□□ -1.134e-6■□□□□ 11.2
Retrieved 100 of 1,140 protein–RNA pairs in 75.6 ms