RNA–Protein interactions for RNA: ENST00000484538.1

MDH1-211, Transcript of malate dehydrogenase 1, humanhuman

TSL 2

Gene MDH1, Length 910 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-211ENST00000484538 AEBP2Q6ZN18 517 aaPredicted RBP34.84■■■■□ 3.17
MDH1-211ENST00000484538 CHIC1Q5VXU3 224 aa33.65■■■□□ 2.98
MDH1-211ENST00000484538 PHF23Q9BUL5 403 aaPredicted RBP29.61■■■□□ 2.33
MDH1-211ENST00000484538 SENP3Q9H4L4 574 aaPredicted RBP29.49■■■□□ 2.31
MDH1-211ENST00000484538 FOXD1Q16676 465 aa27.48■■□□□ 1.99
MDH1-211ENST00000484538 PLPPR3Q6T4P5 718 aa27.11■■□□□ 1.93
MDH1-211ENST00000484538 PPP6R1Q9UPN7 881 aa26.23■■□□□ 1.79
MDH1-211ENST00000484538 ADRA2BP18089 450 aa26.13■■□□□ 1.77
MDH1-211ENST00000484538 PIAS4Q8N2W9 510 aaPredicted RBP25.75■■□□□ 1.71
MDH1-211ENST00000484538 MSH5O43196 834 aa25.39■■□□□ 1.66
MDH1-211ENST00000484538 PPP4R3CPQ6ZMV5 832 aa23.88■■□□□ 1.41
MDH1-211ENST00000484538 MAPK8IP2Q13387 824 aaPredicted RBP23.83■■□□□ 1.41
MDH1-211ENST00000484538 SCAF1Q9H7N4 1312 aaKnown RBP23.8■■□□□ 1.4
MDH1-211ENST00000484538 POTEDQ86YR6 584 aa23.75■■□□□ 1.39
MDH1-211ENST00000484538 DMRT2Q9Y5R5 561 aa23.53■■□□□ 1.36
MDH1-211ENST00000484538 CNKSR2Q8WXI2 1034 aa23.26■■□□□ 1.31
MDH1-211ENST00000484538 NCBP3Q53F19 620 aaKnown RBP23.07■■□□□ 1.28
MDH1-211ENST00000484538 KCNA4P22459 653 aa22.98■■□□□ 1.27
MDH1-211ENST00000484538 HOXD11P31277 338 aaPredicted RBP22.95■■□□□ 1.26
MDH1-211ENST00000484538 RNF216Q9NWF9 866 aaPredicted RBP22.91■■□□□ 1.26
MDH1-211ENST00000484538 NPM3O75607 178 aaKnown RBP22.84■■□□□ 1.25
MDH1-211ENST00000484538 DCAF8L1A6NGE4 600 aa22.38■■□□□ 1.17
MDH1-211ENST00000484538 DNAJC5BQ9UF47 199 aa22.31■■□□□ 1.16
MDH1-211ENST00000484538 RNF39Q9H2S5 420 aa21.79■■□□□ 1.08
MDH1-211ENST00000484538 SLC4A1APQ9BWU0 796 aaKnown RBP21.75■■□□□ 1.07
MDH1-211ENST00000484538 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.74■■□□□ 1.074e-10■□□□□ 9.9
MDH1-211ENST00000484538 SLC4A2P04920 1241 aa21.71■■□□□ 1.07
MDH1-211ENST00000484538 U3KPZ7 1027 aaPredicted RBP21.47■■□□□ 1.03
MDH1-211ENST00000484538 C1QBPQ07021 282 aaKnown RBP21.46■■□□□ 1.03
MDH1-211ENST00000484538 CACNB1Q02641 598 aaPredicted RBP21.36■■□□□ 1.01
MDH1-211ENST00000484538 ZBTB22O15209 634 aa21.2■□□□□ 0.98
MDH1-211ENST00000484538 FOXD4L1Q9NU39 408 aa21.2■□□□□ 0.98
MDH1-211ENST00000484538 MYCNP04198 464 aaPredicted RBP21.06■□□□□ 0.96
MDH1-211ENST00000484538 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.95■□□□□ 0.94
MDH1-211ENST00000484538 HNRNPUL2Q1KMD3 747 aaKnown RBP20.95■□□□□ 0.94
MDH1-211ENST00000484538 SPINK5Q9NQ38 1064 aaPredicted RBP20.95■□□□□ 0.94
MDH1-211ENST00000484538 SAMD1Q6SPF0 538 aaPredicted RBP20.9■□□□□ 0.94
MDH1-211ENST00000484538 EHMT2Q96KQ7 1210 aa20.89■□□□□ 0.93
MDH1-211ENST00000484538 CAPN15O75808 1086 aa20.78■□□□□ 0.92
MDH1-211ENST00000484538 APLP2Q06481 763 aa20.77■□□□□ 0.92
MDH1-211ENST00000484538 CSRNP3Q8WYN3 585 aa20.77■□□□□ 0.92
MDH1-211ENST00000484538 TRHP20396 242 aaPredicted RBP20.62■□□□□ 0.89
MDH1-211ENST00000484538 DSG3P32926 999 aa20.62■□□□□ 0.89
MDH1-211ENST00000484538 ATF5Q9Y2D1 282 aaPredicted RBP20.62■□□□□ 0.89
MDH1-211ENST00000484538 ZNF219Q9P2Y4 722 aaPredicted RBP20.61■□□□□ 0.89
MDH1-211ENST00000484538 ATXN8OSP0DMR3 200 aa20.49■□□□□ 0.87
MDH1-211ENST00000484538 ABCB7O75027 752 aa20.4■□□□□ 0.86
MDH1-211ENST00000484538 POLA2Q14181 598 aa20.25■□□□□ 0.83
MDH1-211ENST00000484538 ZBTB12Q9Y330 459 aaPredicted RBP19.83■□□□□ 0.77
MDH1-211ENST00000484538 MKRN4PQ13434 485 aaPredicted RBP19.71■□□□□ 0.75
MDH1-211ENST00000484538 FBLN2P98095 1184 aa19.61■□□□□ 0.73
MDH1-211ENST00000484538 OSCARQ8IYS5 282 aa19.58■□□□□ 0.72
MDH1-211ENST00000484538 RBM42Q9BTD8 480 aaKnown RBP19.56■□□□□ 0.72
MDH1-211ENST00000484538 SPDYE2BA6NHP3 402 aa19.33■□□□□ 0.68
MDH1-211ENST00000484538 SPDYE6P0CI01 402 aa19.33■□□□□ 0.68
MDH1-211ENST00000484538 SPDYE2Q495Y8 402 aa19.33■□□□□ 0.68
MDH1-211ENST00000484538 AKT1S1Q96B36 256 aa19.3■□□□□ 0.68
MDH1-211ENST00000484538 SSUH2Q9Y2M2 353 aa19.21■□□□□ 0.67
MDH1-211ENST00000484538 ZNF692Q9BU19 519 aaPredicted RBP19.16■□□□□ 0.66
MDH1-211ENST00000484538 REM2Q8IYK8 340 aaPredicted RBP19.13■□□□□ 0.65
MDH1-211ENST00000484538 SPDYE4A6NLX3 237 aa19.01■□□□□ 0.63
MDH1-211ENST00000484538 PABPN1Q86U42 306 aaKnown RBP eCLIP18.93■□□□□ 0.62
MDH1-211ENST00000484538 PITPNM1O00562 1244 aa18.92■□□□□ 0.62
MDH1-211ENST00000484538 CHRDL2Q6WN34 429 aa18.92■□□□□ 0.62
MDH1-211ENST00000484538 SPDYE1Q8NFV5 336 aaPredicted RBP18.81■□□□□ 0.6
MDH1-211ENST00000484538 PROM2Q8N271 834 aa18.77■□□□□ 0.6
MDH1-211ENST00000484538 FKBP8Q14318 412 aa18.71■□□□□ 0.59
MDH1-211ENST00000484538 POTEHQ6S545 545 aa18.71■□□□□ 0.59
MDH1-211ENST00000484538 CLEC11AQ9Y240 323 aa18.7■□□□□ 0.58
MDH1-211ENST00000484538 FXR2P51116 673 aaKnown RBP eCLIP18.66■□□□□ 0.58
MDH1-211ENST00000484538 PIP4P2Q8N4L2 257 aa18.64■□□□□ 0.57
MDH1-211ENST00000484538 PRR29P0C7W0 189 aa18.5■□□□□ 0.55
MDH1-211ENST00000484538 STAG3Q9UJ98 1225 aa18.5■□□□□ 0.55
MDH1-211ENST00000484538 PRKAR2AP13861 404 aaKnown RBP18.4■□□□□ 0.54
MDH1-211ENST00000484538 CHADLQ6NUI6 762 aa18.35■□□□□ 0.53
MDH1-211ENST00000484538 CREBZFQ9NS37 354 aa18.29■□□□□ 0.52
MDH1-211ENST00000484538 FARP1Q9Y4F1 1045 aaPredicted RBP18.15■□□□□ 0.5
MDH1-211ENST00000484538 MNX1P50219 401 aaPredicted RBP18.12■□□□□ 0.49
MDH1-211ENST00000484538 FBXO3Q9UK99 471 aa18.08■□□□□ 0.48
MDH1-211ENST00000484538 HAX1O00165 279 aa18.05■□□□□ 0.48
MDH1-211ENST00000484538 C19orf67A6NJJ6 358 aa18.03■□□□□ 0.48
MDH1-211ENST00000484538 EVX2Q03828 476 aa18.02■□□□□ 0.48
MDH1-211ENST00000484538 MIER1Q8N108 512 aa18.01■□□□□ 0.47
MDH1-211ENST00000484538 VASPP50552 380 aaPredicted RBP17.92■□□□□ 0.46
MDH1-211ENST00000484538 PLCD3Q8N3E9 789 aa17.92■□□□□ 0.46
MDH1-211ENST00000484538 PLEKHG5O94827 1062 aa17.85■□□□□ 0.45
MDH1-211ENST00000484538 NPM1P06748 294 aaKnown RBP eCLIP17.85■□□□□ 0.45
MDH1-211ENST00000484538 CD44P16070 742 aaKnown RBP17.85■□□□□ 0.45
MDH1-211ENST00000484538 SP7Q8TDD2 431 aaPredicted RBP17.83■□□□□ 0.44
MDH1-211ENST00000484538 ZBTB47Q9UFB7 747 aaPredicted RBP17.74■□□□□ 0.43
MDH1-211ENST00000484538 NUBP1P53384 320 aa17.7■□□□□ 0.42
MDH1-211ENST00000484538 IFNLR1Q8IU57 520 aaPredicted RBP17.69■□□□□ 0.42
MDH1-211ENST00000484538 ZRANB1Q9UGI0 708 aa17.69■□□□□ 0.42
MDH1-211ENST00000484538 RASEFQ8IZ41 740 aa17.68■□□□□ 0.42
MDH1-211ENST00000484538 ZNF579Q8NAF0 562 aaKnown RBP17.65■□□□□ 0.42
MDH1-211ENST00000484538 PAK3O75914 559 aaPredicted RBP17.6■□□□□ 0.41
MDH1-211ENST00000484538 TSPYL2Q9H2G4 693 aaPredicted RBP17.59■□□□□ 0.41
MDH1-211ENST00000484538 GABBR2O75899 941 aa17.58■□□□□ 0.4
MDH1-211ENST00000484538 KLHL34Q8N239 644 aa17.58■□□□□ 0.4
MDH1-211ENST00000484538 CCDC61Q9Y6R9 512 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 119.3 ms