RNA–Protein interactions for RNA: ENST00000517793.1

COPS5-204, Transcript of COP9 signalosome subunit 5, humanhuman

TSL 5

Gene COPS5, Length 657 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS5-204ENST00000517793 NISCHQ9Y2I1 1504 aa34.27■■■■□ 3.08
COPS5-204ENST00000517793 CCDC180Q9P1Z9 1646 aa30.58■■■□□ 2.49
COPS5-204ENST00000517793 ABCC9O60706 1549 aa29.8■■■□□ 2.36
COPS5-204ENST00000517793 RB1CC1Q8TDY2 1594 aa28.71■■■□□ 2.19
COPS5-204ENST00000517793 NACADO15069 1562 aa28.68■■■□□ 2.18
COPS5-204ENST00000517793 ZCCHC6Q5VYS8 1495 aaKnown RBP28.58■■■□□ 2.17
COPS5-204ENST00000517793 MYO15BQ96JP2 1530 aa28.54■■■□□ 2.16
COPS5-204ENST00000517793 DCAF1Q9Y4B6 1507 aa28.4■■■□□ 2.14
COPS5-204ENST00000517793 DCAF8L2P0C7V8 631 aa28.4■■■□□ 2.14
COPS5-204ENST00000517793 UNC13AQ9UPW8 1703 aa28.15■■■□□ 2.1
COPS5-204ENST00000517793 BICRAQ9NZM4 1560 aa27.9■■■□□ 2.06
COPS5-204ENST00000517793 SCRIBQ14160 1630 aa27.81■■■□□ 2.04
COPS5-204ENST00000517793 PABPN1Q86U42 306 aaKnown RBP eCLIP27.75■■■□□ 2.03
COPS5-204ENST00000517793 SHROOM4Q9ULL8 1493 aa27.61■■■□□ 2.01
COPS5-204ENST00000517793 DNAJC5BQ9UF47 199 aa27.33■■□□□ 1.97
COPS5-204ENST00000517793 EIF4G1Q04637 1599 aaKnown RBP27.13■■□□□ 1.93
COPS5-204ENST00000517793 CC2D2AQ9P2K1 1620 aa27.01■■□□□ 1.91
COPS5-204ENST00000517793 CECR2Q9BXF3 1484 aa26.79■■□□□ 1.88
COPS5-204ENST00000517793 SMARCA4P51532 1647 aa26.63■■□□□ 1.85
COPS5-204ENST00000517793 BAZ1AQ9NRL2 1556 aaPredicted RBP26.57■■□□□ 1.84
COPS5-204ENST00000517793 NCAPD3P42695 1498 aa26.44■■□□□ 1.82
COPS5-204ENST00000517793 ATAD2BQ9ULI0 1458 aa26.44■■□□□ 1.82
COPS5-204ENST00000517793 SMARCA2P51531 1590 aa26.43■■□□□ 1.82
COPS5-204ENST00000517793 MROH2BQ7Z745 1585 aa26.41■■□□□ 1.82
COPS5-204ENST00000517793 PEG3Q9GZU2 1588 aa26.41■■□□□ 1.82
COPS5-204ENST00000517793 HMGXB3Q12766 1538 aa26.37■■□□□ 1.81
COPS5-204ENST00000517793 BAZ1BQ9UIG0 1483 aaKnown RBP26.22■■□□□ 1.79
COPS5-204ENST00000517793 WIZO95785 1651 aa26.14■■□□□ 1.78
COPS5-204ENST00000517793 RSF1Q96T23 1441 aaPredicted RBP26.06■■□□□ 1.76
COPS5-204ENST00000517793 TOP2AP11388 1531 aaKnown RBP25.88■■□□□ 1.73
COPS5-204ENST00000517793 NESP48681 1621 aa25.81■■□□□ 1.72
COPS5-204ENST00000517793 LAMC3Q9Y6N6 1575 aa25.78■■□□□ 1.72
COPS5-204ENST00000517793 ERCC6Q03468 1493 aa25.66■■□□□ 1.7
COPS5-204ENST00000517793 CADPSQ9ULU8 1353 aa25.62■■□□□ 1.69
COPS5-204ENST00000517793 KIF21AQ7Z4S6 1674 aa25.57■■□□□ 1.68
COPS5-204ENST00000517793 PDS5BQ9NTI5 1447 aa25.52■■□□□ 1.68
COPS5-204ENST00000517793 CFTRP13569 1480 aa25.52■■□□□ 1.68
COPS5-204ENST00000517793 THOC2Q8NI27 1593 aaKnown RBP25.51■■□□□ 1.67
COPS5-204ENST00000517793 CCDC88BA6NC98 1476 aa25.5■■□□□ 1.67
COPS5-204ENST00000517793 CUX2O14529 1486 aa25.47■■□□□ 1.67
COPS5-204ENST00000517793 PRDM2Q13029 1718 aa25.44■■□□□ 1.66
COPS5-204ENST00000517793 FANCD2Q9BXW9 1451 aa25.35■■□□□ 1.65
COPS5-204ENST00000517793 CEP164Q9UPV0 1460 aa25.34■■□□□ 1.65
COPS5-204ENST00000517793 MRC2Q9UBG0 1479 aa25.32■■□□□ 1.64
COPS5-204ENST00000517793 WDR62O43379 1518 aa25.27■■□□□ 1.64
COPS5-204ENST00000517793 SUPT5HO00267 1087 aaKnown RBP25.23■■□□□ 1.63
COPS5-204ENST00000517793 URB2Q14146 1524 aaKnown RBP25.13■■□□□ 1.61
COPS5-204ENST00000517793 TOPBP1Q92547 1522 aa24.97■■□□□ 1.59
COPS5-204ENST00000517793 DNMBPQ6XZF7 1577 aa24.97■■□□□ 1.59
COPS5-204ENST00000517793 ABCC8Q09428 1581 aa24.94■■□□□ 1.58
COPS5-204ENST00000517793 DNAJC5Q9H3Z4 198 aa24.91■■□□□ 1.58
COPS5-204ENST00000517793 IFT140Q96RY7 1462 aa24.8■■□□□ 1.56
COPS5-204ENST00000517793 CUX1P39880 1505 aa24.78■■□□□ 1.56
COPS5-204ENST00000517793 POLA1P09884 1462 aaPredicted RBP24.76■■□□□ 1.55
COPS5-204ENST00000517793 TARBP1Q13395 1621 aaKnown RBP24.75■■□□□ 1.55
COPS5-204ENST00000517793 ZNF608Q9ULD9 1512 aaPredicted RBP24.69■■□□□ 1.54
COPS5-204ENST00000517793 FGD5Q6ZNL6 1462 aa24.69■■□□□ 1.54
COPS5-204ENST00000517793 EIF4G3O43432 1585 aaKnown RBP24.66■■□□□ 1.54
COPS5-204ENST00000517793 BIVM-ERCC5R4GMW8 1640 aa24.61■■□□□ 1.53
COPS5-204ENST00000517793 RAD54L2Q9Y4B4 1467 aa24.61■■□□□ 1.53
COPS5-204ENST00000517793 WDR97A6NE52 1622 aa24.6■■□□□ 1.53
COPS5-204ENST00000517793 SOGA1O94964 1423 aa24.59■■□□□ 1.53
COPS5-204ENST00000517793 TOP2BQ02880 1626 aa24.58■■□□□ 1.53
COPS5-204ENST00000517793 WRNQ14191 1432 aaPredicted RBP eCLIP24.57■■□□□ 1.52
COPS5-204ENST00000517793 SYNJ1O43426 1573 aa24.57■■□□□ 1.52
COPS5-204ENST00000517793 AQRO60306 1485 aaKnown RBP eCLIP24.51■■□□□ 1.511e-6■□□□□ 10.6
COPS5-204ENST00000517793 ABCA10Q8WWZ4 1543 aa24.45■■□□□ 1.51
COPS5-204ENST00000517793 TDRD9Q8NDG6 1382 aaKnown RBP24.44■■□□□ 1.5
COPS5-204ENST00000517793 ABCA5Q8WWZ7 1642 aa24.43■■□□□ 1.5
COPS5-204ENST00000517793 PBRM1Q86U86 1689 aa24.39■■□□□ 1.49
COPS5-204ENST00000517793 CHD1O14646 1710 aa24.36■■□□□ 1.49
COPS5-204ENST00000517793 GRIN2BQ13224 1484 aa24.34■■□□□ 1.49
COPS5-204ENST00000517793 GAPVD1Q14C86 1478 aa24.33■■□□□ 1.49
COPS5-204ENST00000517793 SNAPC4Q5SXM2 1469 aa24.32■■□□□ 1.48
COPS5-204ENST00000517793 MAGI1Q96QZ7 1491 aaPredicted RBP24.31■■□□□ 1.48
COPS5-204ENST00000517793 OSCARQ8IYS5 282 aa24.28■■□□□ 1.48
COPS5-204ENST00000517793 SYNJ2O15056 1496 aa24.21■■□□□ 1.47
COPS5-204ENST00000517793 ADAMTS12P58397 1594 aa24.18■■□□□ 1.46
COPS5-204ENST00000517793 ERICH3Q5RHP9 1530 aa24.17■■□□□ 1.46
COPS5-204ENST00000517793 FBLN2P98095 1184 aa24.11■■□□□ 1.45
COPS5-204ENST00000517793 CLASP1Q7Z460 1538 aa24.1■■□□□ 1.45
COPS5-204ENST00000517793 CHMP7Q8WUX9 453 aaPredicted RBP24.07■■□□□ 1.44
COPS5-204ENST00000517793 GRIN2AQ12879 1464 aa24.06■■□□□ 1.44
COPS5-204ENST00000517793 FHAD1B1AJZ9 1412 aa24.05■■□□□ 1.44
COPS5-204ENST00000517793 RIMBP3CA6NJZ7 1639 aa24.04■■□□□ 1.44
COPS5-204ENST00000517793 RIMBP3BA6NNM3 1639 aa24.04■■□□□ 1.44
COPS5-204ENST00000517793 RIMBP3Q9UFD9 1639 aa24.04■■□□□ 1.44
COPS5-204ENST00000517793 KIF27Q86VH2 1401 aa24.03■■□□□ 1.44
COPS5-204ENST00000517793 ARHGEF11O15085 1522 aa24.01■■□□□ 1.43
COPS5-204ENST00000517793 CUL7Q14999 1698 aa23.98■■□□□ 1.43
COPS5-204ENST00000517793 CEP170Q5SW79 1584 aa23.97■■□□□ 1.43
COPS5-204ENST00000517793 NUP160Q12769 1436 aa23.96■■□□□ 1.43
COPS5-204ENST00000517793 IGF1RP08069 1367 aa23.93■■□□□ 1.42
COPS5-204ENST00000517793 SHROOM2Q13796 1616 aa23.84■■□□□ 1.41
COPS5-204ENST00000517793 TRIM41Q8WV44 630 aa23.84■■□□□ 1.41
COPS5-204ENST00000517793 RUSC2Q8N2Y8 1516 aa23.84■■□□□ 1.41
COPS5-204ENST00000517793 ARAP1Q96P48 1450 aa23.83■■□□□ 1.41
COPS5-204ENST00000517793 CARMIL1Q5VZK9 1371 aa23.78■■□□□ 1.4
COPS5-204ENST00000517793 ERCC6L2Q5T890 1561 aa23.73■■□□□ 1.39
COPS5-204ENST00000517793 KIAA0586Q9BVV6 1533 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms