RNA–Protein interactions for RNA: ENST00000357849.8

COPS5-201, Transcript of COP9 signalosome subunit 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS5, Length 1,480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS5-201ENST00000357849 AEBP2Q6ZN18 517 aaPredicted RBP26.97■■□□□ 1.91
COPS5-201ENST00000357849 CHIC1Q5VXU3 224 aa26.26■■□□□ 1.79
COPS5-201ENST00000357849 PHF23Q9BUL5 403 aaPredicted RBP23.1■■□□□ 1.29
COPS5-201ENST00000357849 SENP3Q9H4L4 574 aaPredicted RBP22.89■■□□□ 1.25
COPS5-201ENST00000357849 PLPPR3Q6T4P5 718 aa21.3■■□□□ 1
COPS5-201ENST00000357849 FOXD1Q16676 465 aa21.26■□□□□ 0.99
COPS5-201ENST00000357849 PPP6R1Q9UPN7 881 aa20.4■□□□□ 0.86
COPS5-201ENST00000357849 ADRA2BP18089 450 aa20.39■□□□□ 0.85
COPS5-201ENST00000357849 NISCHQ9Y2I1 1504 aa20.35■□□□□ 0.85
COPS5-201ENST00000357849 PIAS4Q8N2W9 510 aaPredicted RBP20.05■□□□□ 0.8
COPS5-201ENST00000357849 ABCC9O60706 1549 aa19.93■□□□□ 0.78
COPS5-201ENST00000357849 DNAJC5BQ9UF47 199 aa19.63■□□□□ 0.73
COPS5-201ENST00000357849 MSH5O43196 834 aa19.62■□□□□ 0.73
COPS5-201ENST00000357849 DNAJC5Q9H3Z4 198 aa19.05■□□□□ 0.64
COPS5-201ENST00000357849 CCDC180Q9P1Z9 1646 aa18.84■□□□□ 0.61
COPS5-201ENST00000357849 PPP4R3CPQ6ZMV5 832 aa18.77■□□□□ 0.59
COPS5-201ENST00000357849 SCAF1Q9H7N4 1312 aaKnown RBP18.63■□□□□ 0.57
COPS5-201ENST00000357849 RB1CC1Q8TDY2 1594 aa18.54■□□□□ 0.56
COPS5-201ENST00000357849 MAPK8IP2Q13387 824 aaPredicted RBP18.52■□□□□ 0.55
COPS5-201ENST00000357849 PABPN1Q86U42 306 aaKnown RBP eCLIP18.36■□□□□ 0.53
COPS5-201ENST00000357849 KCNA4P22459 653 aa18.26■□□□□ 0.51
COPS5-201ENST00000357849 DMRT2Q9Y5R5 561 aa18.26■□□□□ 0.51
COPS5-201ENST00000357849 NCBP3Q53F19 620 aaKnown RBP18.25■□□□□ 0.51
COPS5-201ENST00000357849 CNKSR2Q8WXI2 1034 aa18.25■□□□□ 0.51
COPS5-201ENST00000357849 CECR2Q9BXF3 1484 aa18.12■□□□□ 0.49
COPS5-201ENST00000357849 NACADO15069 1562 aa18.11■□□□□ 0.49
COPS5-201ENST00000357849 UNC13AQ9UPW8 1703 aa18■□□□□ 0.47
COPS5-201ENST00000357849 NPM3O75607 178 aaKnown RBP17.99■□□□□ 0.47
COPS5-201ENST00000357849 POTEDQ86YR6 584 aa17.99■□□□□ 0.47
COPS5-201ENST00000357849 CC2D2AQ9P2K1 1620 aa17.95■□□□□ 0.46
COPS5-201ENST00000357849 RNF216Q9NWF9 866 aaPredicted RBP17.91■□□□□ 0.46
COPS5-201ENST00000357849 BICRAQ9NZM4 1560 aa17.88■□□□□ 0.45
COPS5-201ENST00000357849 HOXD11P31277 338 aaPredicted RBP17.85■□□□□ 0.45
COPS5-201ENST00000357849 DCAF8L2P0C7V8 631 aa17.82■□□□□ 0.44
COPS5-201ENST00000357849 TRIM41Q8WV44 630 aa17.76■□□□□ 0.43
COPS5-201ENST00000357849 CUX2O14529 1486 aa17.75■□□□□ 0.43
COPS5-201ENST00000357849 SHROOM4Q9ULL8 1493 aa17.7■□□□□ 0.42
COPS5-201ENST00000357849 EIF4G1Q04637 1599 aaKnown RBP17.62■□□□□ 0.41
COPS5-201ENST00000357849 DCAF8L1A6NGE4 600 aa17.5■□□□□ 0.39
COPS5-201ENST00000357849 MYO15BQ96JP2 1530 aa17.45■□□□□ 0.38
COPS5-201ENST00000357849 ERCC6Q03468 1493 aa17.41■□□□□ 0.38
COPS5-201ENST00000357849 SLC4A1APQ9BWU0 796 aaKnown RBP17.38■□□□□ 0.37
COPS5-201ENST00000357849 SCRIBQ14160 1630 aa17.08■□□□□ 0.33
COPS5-201ENST00000357849 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.03■□□□□ 0.321e-6■□□□□ 10.9
COPS5-201ENST00000357849 SLC4A2P04920 1241 aa17■□□□□ 0.31
COPS5-201ENST00000357849 EHMT2Q96KQ7 1210 aa16.84■□□□□ 0.29
COPS5-201ENST00000357849 FOXD4L1Q9NU39 408 aa16.83■□□□□ 0.28
COPS5-201ENST00000357849 THOC2Q8NI27 1593 aaKnown RBP16.82■□□□□ 0.28
COPS5-201ENST00000357849 ZBTB22O15209 634 aa16.81■□□□□ 0.28
COPS5-201ENST00000357849 RNF39Q9H2S5 420 aa16.81■□□□□ 0.28
COPS5-201ENST00000357849 OSCARQ8IYS5 282 aa16.79■□□□□ 0.28
COPS5-201ENST00000357849 DCAF1Q9Y4B6 1507 aa16.77■□□□□ 0.27
COPS5-201ENST00000357849 U3KPZ7 1027 aaPredicted RBP16.75■□□□□ 0.27
COPS5-201ENST00000357849 NESP48681 1621 aa16.73■□□□□ 0.27
COPS5-201ENST00000357849 TRHP20396 242 aaPredicted RBP16.71■□□□□ 0.27
COPS5-201ENST00000357849 BAZ1AQ9NRL2 1556 aaPredicted RBP16.69■□□□□ 0.26
COPS5-201ENST00000357849 NCAPD3P42695 1498 aa16.69■□□□□ 0.26
COPS5-201ENST00000357849 SMARCA2P51531 1590 aa16.66■□□□□ 0.26
COPS5-201ENST00000357849 CSRNP3Q8WYN3 585 aa16.64■□□□□ 0.25
COPS5-201ENST00000357849 MYCNP04198 464 aaPredicted RBP16.62■□□□□ 0.25
COPS5-201ENST00000357849 RIMBP3CA6NJZ7 1639 aa16.59■□□□□ 0.25
COPS5-201ENST00000357849 RIMBP3BA6NNM3 1639 aa16.59■□□□□ 0.25
COPS5-201ENST00000357849 RIMBP3Q9UFD9 1639 aa16.59■□□□□ 0.25
COPS5-201ENST00000357849 C1QBPQ07021 282 aaKnown RBP16.59■□□□□ 0.25
COPS5-201ENST00000357849 ZCCHC6Q5VYS8 1495 aaKnown RBP16.59■□□□□ 0.25
COPS5-201ENST00000357849 LAMC3Q9Y6N6 1575 aa16.55■□□□□ 0.24
COPS5-201ENST00000357849 PDS5BQ9NTI5 1447 aa16.54■□□□□ 0.24
COPS5-201ENST00000357849 KIF21AQ7Z4S6 1674 aa16.52■□□□□ 0.23
COPS5-201ENST00000357849 ILDR1Q86SU0 546 aaPredicted RBP16.51■□□□□ 0.23
COPS5-201ENST00000357849 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.49■□□□□ 0.23
COPS5-201ENST00000357849 HNRNPUL2Q1KMD3 747 aaKnown RBP16.49■□□□□ 0.23
COPS5-201ENST00000357849 HMGXB3Q12766 1538 aa16.46■□□□□ 0.23
COPS5-201ENST00000357849 ATAD2BQ9ULI0 1458 aa16.44■□□□□ 0.22
COPS5-201ENST00000357849 CACNB1Q02641 598 aaPredicted RBP16.43■□□□□ 0.22
COPS5-201ENST00000357849 CYB5RLQ6IPT4 315 aa16.43■□□□□ 0.22
COPS5-201ENST00000357849 SAMD1Q6SPF0 538 aaPredicted RBP16.43■□□□□ 0.22
COPS5-201ENST00000357849 ARHGEF11O15085 1522 aa16.41■□□□□ 0.22
COPS5-201ENST00000357849 MRC2Q9UBG0 1479 aa16.4■□□□□ 0.22
COPS5-201ENST00000357849 WDR62O43379 1518 aa16.35■□□□□ 0.21
COPS5-201ENST00000357849 APLP2Q06481 763 aa16.34■□□□□ 0.21
COPS5-201ENST00000357849 SPINK5Q9NQ38 1064 aaPredicted RBP16.3■□□□□ 0.2
COPS5-201ENST00000357849 BAZ1BQ9UIG0 1483 aaKnown RBP16.28■□□□□ 0.2
COPS5-201ENST00000357849 CAPN15O75808 1086 aa16.25■□□□□ 0.19
COPS5-201ENST00000357849 ATXN8OSP0DMR3 200 aa16.22■□□□□ 0.19
COPS5-201ENST00000357849 ATF5Q9Y2D1 282 aaPredicted RBP16.19■□□□□ 0.18
COPS5-201ENST00000357849 CADPSQ9ULU8 1353 aa16.14■□□□□ 0.17
COPS5-201ENST00000357849 SMARCA4P51532 1647 aa16.14■□□□□ 0.17
COPS5-201ENST00000357849 ARAP1Q96P48 1450 aa16.13■□□□□ 0.17
COPS5-201ENST00000357849 ZNF219Q9P2Y4 722 aaPredicted RBP16.13■□□□□ 0.17
COPS5-201ENST00000357849 CEP164Q9UPV0 1460 aa16.12■□□□□ 0.17
COPS5-201ENST00000357849 RSF1Q96T23 1441 aaPredicted RBP16.01■□□□□ 0.15
COPS5-201ENST00000357849 PEG3Q9GZU2 1588 aa15.98■□□□□ 0.15
COPS5-201ENST00000357849 DSG3P32926 999 aa15.97■□□□□ 0.15
COPS5-201ENST00000357849 FANCD2Q9BXW9 1451 aa15.96■□□□□ 0.15
COPS5-201ENST00000357849 ABCB7O75027 752 aa15.94■□□□□ 0.14
COPS5-201ENST00000357849 POLA2Q14181 598 aa15.87■□□□□ 0.13
COPS5-201ENST00000357849 CHD1O14646 1710 aa15.85■□□□□ 0.13
COPS5-201ENST00000357849 IFT140Q96RY7 1462 aa15.84■□□□□ 0.13
COPS5-201ENST00000357849 FBLN2P98095 1184 aa15.84■□□□□ 0.13
COPS5-201ENST00000357849 URB2Q14146 1524 aaKnown RBP15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms