RNA–Protein interactions for RNA: ENST00000233114.12

MDH1-201, Transcript of malate dehydrogenase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MDH1, Length 1,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-201ENST00000233114 AEBP2Q6ZN18 517 aaPredicted RBP26.6■■□□□ 1.85
MDH1-201ENST00000233114 CHIC1Q5VXU3 224 aa25.01■■□□□ 1.59
MDH1-201ENST00000233114 SENP3Q9H4L4 574 aaPredicted RBP22.75■■□□□ 1.23
MDH1-201ENST00000233114 PHF23Q9BUL5 403 aaPredicted RBP22.41■■□□□ 1.18
MDH1-201ENST00000233114 FOXD1Q16676 465 aa21.23■□□□□ 0.99
MDH1-201ENST00000233114 NISCHQ9Y2I1 1504 aa20.93■□□□□ 0.94
MDH1-201ENST00000233114 MSH5O43196 834 aa19.99■□□□□ 0.79
MDH1-201ENST00000233114 POTEDQ86YR6 584 aa19.97■□□□□ 0.79
MDH1-201ENST00000233114 PLPPR3Q6T4P5 718 aa19.87■□□□□ 0.77
MDH1-201ENST00000233114 PIAS4Q8N2W9 510 aaPredicted RBP19.79■□□□□ 0.76
MDH1-201ENST00000233114 PPP6R1Q9UPN7 881 aa19.63■□□□□ 0.73
MDH1-201ENST00000233114 ADRA2BP18089 450 aa19.57■□□□□ 0.72
MDH1-201ENST00000233114 MAPK8IP2Q13387 824 aaPredicted RBP18.05■□□□□ 0.48
MDH1-201ENST00000233114 CCDC180Q9P1Z9 1646 aa18.04■□□□□ 0.48
MDH1-201ENST00000233114 DMRT2Q9Y5R5 561 aa17.99■□□□□ 0.47
MDH1-201ENST00000233114 SCAF1Q9H7N4 1312 aaKnown RBP17.91■□□□□ 0.46
MDH1-201ENST00000233114 ZCCHC6Q5VYS8 1495 aaKnown RBP17.72■□□□□ 0.43
MDH1-201ENST00000233114 DCAF1Q9Y4B6 1507 aa17.38■□□□□ 0.37
MDH1-201ENST00000233114 PPP4R3CPQ6ZMV5 832 aa17.37■□□□□ 0.37
MDH1-201ENST00000233114 SHROOM4Q9ULL8 1493 aa17.36■□□□□ 0.37
MDH1-201ENST00000233114 CACNB1Q02641 598 aaPredicted RBP17.32■□□□□ 0.36
MDH1-201ENST00000233114 DCAF8L1A6NGE4 600 aa17.31■□□□□ 0.36
MDH1-201ENST00000233114 HOXD11P31277 338 aaPredicted RBP17.22■□□□□ 0.35
MDH1-201ENST00000233114 CNKSR2Q8WXI2 1034 aa17.11■□□□□ 0.33
MDH1-201ENST00000233114 RNF39Q9H2S5 420 aa17.02■□□□□ 0.32
MDH1-201ENST00000233114 RNF216Q9NWF9 866 aaPredicted RBP17.02■□□□□ 0.32
MDH1-201ENST00000233114 SUPT5HO00267 1087 aaKnown RBP17■□□□□ 0.31
MDH1-201ENST00000233114 MYO15BQ96JP2 1530 aa16.96■□□□□ 0.31
MDH1-201ENST00000233114 DCAF8L2P0C7V8 631 aa16.94■□□□□ 0.3
MDH1-201ENST00000233114 C1QBPQ07021 282 aaKnown RBP16.75■□□□□ 0.27
MDH1-201ENST00000233114 ABCC9O60706 1549 aa16.71■□□□□ 0.27
MDH1-201ENST00000233114 DNAJC5BQ9UF47 199 aa16.67■□□□□ 0.26
MDH1-201ENST00000233114 NACADO15069 1562 aa16.64■□□□□ 0.25
MDH1-201ENST00000233114 NCBP3Q53F19 620 aaKnown RBP16.63■□□□□ 0.25
MDH1-201ENST00000233114 SCRIBQ14160 1630 aa16.58■□□□□ 0.24
MDH1-201ENST00000233114 RSF1Q96T23 1441 aaPredicted RBP16.44■□□□□ 0.22
MDH1-201ENST00000233114 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.43■□□□□ 0.223e-7■□□□□ 11.3
MDH1-201ENST00000233114 NPM3O75607 178 aaKnown RBP16.38■□□□□ 0.21
MDH1-201ENST00000233114 RB1CC1Q8TDY2 1594 aa16.35■□□□□ 0.21
MDH1-201ENST00000233114 MROH2BQ7Z745 1585 aa16.16■□□□□ 0.18
MDH1-201ENST00000233114 CECR2Q9BXF3 1484 aa16.15■□□□□ 0.18
MDH1-201ENST00000233114 BAZ1AQ9NRL2 1556 aaPredicted RBP16.13■□□□□ 0.17
MDH1-201ENST00000233114 WIZO95785 1651 aa16.06■□□□□ 0.16
MDH1-201ENST00000233114 U3KPZ7 1027 aaPredicted RBP16.04■□□□□ 0.16
MDH1-201ENST00000233114 UNC13AQ9UPW8 1703 aa16.01■□□□□ 0.15
MDH1-201ENST00000233114 TRIM41Q8WV44 630 aa15.98■□□□□ 0.15
MDH1-201ENST00000233114 SMARCA4P51532 1647 aa15.97■□□□□ 0.15
MDH1-201ENST00000233114 HRCP23327 699 aa15.96■□□□□ 0.15
MDH1-201ENST00000233114 TOP2AP11388 1531 aaKnown RBP15.96■□□□□ 0.15
MDH1-201ENST00000233114 EIF4G1Q04637 1599 aaKnown RBP15.95■□□□□ 0.14
MDH1-201ENST00000233114 LOC105371045A0A1W2PR82 267 aa15.95■□□□□ 0.14
MDH1-201ENST00000233114 CAPN15O75808 1086 aa15.9■□□□□ 0.14
MDH1-201ENST00000233114 SPINK5Q9NQ38 1064 aaPredicted RBP15.89■□□□□ 0.13
MDH1-201ENST00000233114 PCGF6Q9BYE7 350 aa15.86■□□□□ 0.13
MDH1-201ENST00000233114 DSG3P32926 999 aa15.85■□□□□ 0.13
MDH1-201ENST00000233114 KCNA4P22459 653 aa15.83■□□□□ 0.13
MDH1-201ENST00000233114 BICRAQ9NZM4 1560 aa15.81■□□□□ 0.12
MDH1-201ENST00000233114 SMARCA2P51531 1590 aa15.81■□□□□ 0.12
MDH1-201ENST00000233114 TRIM26Q12899 539 aaPredicted RBP15.79■□□□□ 0.12
MDH1-201ENST00000233114 PEG3Q9GZU2 1588 aa15.79■□□□□ 0.12
MDH1-201ENST00000233114 CCDC88BA6NC98 1476 aa15.75■□□□□ 0.11
MDH1-201ENST00000233114 SLC4A2P04920 1241 aa15.71■□□□□ 0.11
MDH1-201ENST00000233114 SLC24A1O60721 1099 aa15.67■□□□□ 0.1
MDH1-201ENST00000233114 FAM9AQ8IZU1 332 aaPredicted RBP15.63■□□□□ 0.09
MDH1-201ENST00000233114 EEA1Q15075 1411 aa15.63■□□□□ 0.09
MDH1-201ENST00000233114 POTEHQ6S545 545 aa15.6■□□□□ 0.09
MDH1-201ENST00000233114 ABCC8Q09428 1581 aa15.58■□□□□ 0.09
MDH1-201ENST00000233114 APLP2Q06481 763 aa15.58■□□□□ 0.08
MDH1-201ENST00000233114 TRHP20396 242 aaPredicted RBP15.57■□□□□ 0.08
MDH1-201ENST00000233114 ATAD2BQ9ULI0 1458 aa15.54■□□□□ 0.08
MDH1-201ENST00000233114 ZEB1P37275 1124 aaPredicted RBP15.54■□□□□ 0.08
MDH1-201ENST00000233114 PABPN1Q86U42 306 aaKnown RBP eCLIP15.54■□□□□ 0.08
MDH1-201ENST00000233114 ZNF219Q9P2Y4 722 aaPredicted RBP15.54■□□□□ 0.08
MDH1-201ENST00000233114 ABCB7O75027 752 aa15.51■□□□□ 0.07
MDH1-201ENST00000233114 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.5■□□□□ 0.07
MDH1-201ENST00000233114 HNRNPUL2Q1KMD3 747 aaKnown RBP15.5■□□□□ 0.07
MDH1-201ENST00000233114 BAZ1BQ9UIG0 1483 aaKnown RBP15.5■□□□□ 0.07
MDH1-201ENST00000233114 WRNQ14191 1432 aaPredicted RBP eCLIP15.48■□□□□ 0.07
MDH1-201ENST00000233114 TNIKQ9UKE5 1360 aa15.45■□□□□ 0.06
MDH1-201ENST00000233114 SOGA1O94964 1423 aa15.41■□□□□ 0.06
MDH1-201ENST00000233114 SAMD1Q6SPF0 538 aaPredicted RBP15.4■□□□□ 0.06
MDH1-201ENST00000233114 HMGXB3Q12766 1538 aa15.39■□□□□ 0.05
MDH1-201ENST00000233114 GOLGA3Q08378 1498 aa15.39■□□□□ 0.05
MDH1-201ENST00000233114 CEP162Q5TB80 1403 aa15.39■□□□□ 0.05
MDH1-201ENST00000233114 CSRNP3Q8WYN3 585 aa15.38■□□□□ 0.05
MDH1-201ENST00000233114 KIF21BO75037 1637 aa15.37■□□□□ 0.05
MDH1-201ENST00000233114 PPARGC1BQ86YN6 1023 aaKnown RBP15.37■□□□□ 0.05
MDH1-201ENST00000233114 SYNJ1O43426 1573 aa15.37■□□□□ 0.05
MDH1-201ENST00000233114 CEP164Q9UPV0 1460 aa15.34■□□□□ 0.05
MDH1-201ENST00000233114 NCAPD3P42695 1498 aa15.33■□□□□ 0.04
MDH1-201ENST00000233114 EHMT2Q96KQ7 1210 aa15.33■□□□□ 0.04
MDH1-201ENST00000233114 TOP2BQ02880 1626 aa15.3■□□□□ 0.04
MDH1-201ENST00000233114 RUSC2Q8N2Y8 1516 aa15.3■□□□□ 0.04
MDH1-201ENST00000233114 BIVM-ERCC5R4GMW8 1640 aa15.29■□□□□ 0.04
MDH1-201ENST00000233114 UBTFP17480 764 aaKnown RBP15.2■□□□□ 0.02
MDH1-201ENST00000233114 MYCNP04198 464 aaPredicted RBP15.17■□□□□ 0.02
MDH1-201ENST00000233114 ERICH3Q5RHP9 1530 aa15.17■□□□□ 0.02
MDH1-201ENST00000233114 PRDM2Q13029 1718 aa15.16■□□□□ 0.02
MDH1-201ENST00000233114 RBM42Q9BTD8 480 aaKnown RBP15.15■□□□□ 0.02
MDH1-201ENST00000233114 CFTRP13569 1480 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms