RNA–Protein interactions for RNA: ENST00000421278.2

UBAP2-207, Transcript of ubiquitin associated protein 2, humanhuman

TSL 5

Gene UBAP2, Length 833 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP2-207ENST00000421278 CHIC1Q5VXU3 224 aa19.75■□□□□ 0.75
UBAP2-207ENST00000421278 AEBP2Q6ZN18 517 aaPredicted RBP19.53■□□□□ 0.72
UBAP2-207ENST00000421278 PHF23Q9BUL5 403 aaPredicted RBP17.39■□□□□ 0.37
UBAP2-207ENST00000421278 SENP3Q9H4L4 574 aaPredicted RBP16.56■□□□□ 0.24
UBAP2-207ENST00000421278 PLPPR3Q6T4P5 718 aa16.37■□□□□ 0.21
UBAP2-207ENST00000421278 ADRA2BP18089 450 aa15.26■□□□□ 0.03
UBAP2-207ENST00000421278 FOXD1Q16676 465 aa15.24■□□□□ 0.03
UBAP2-207ENST00000421278 PPP6R1Q9UPN7 881 aa15.14■□□□□ 0.01
UBAP2-207ENST00000421278 KCNA4P22459 653 aa14.88□□□□□ -0.03
UBAP2-207ENST00000421278 EHMT2Q96KQ7 1210 aa14.71□□□□□ -0.05
UBAP2-207ENST00000421278 PIAS4Q8N2W9 510 aaPredicted RBP14.6□□□□□ -0.07
UBAP2-207ENST00000421278 PPP4R3CPQ6ZMV5 832 aa14.5□□□□□ -0.09
UBAP2-207ENST00000421278 NCBP3Q53F19 620 aaKnown RBP14.37□□□□□ -0.11
UBAP2-207ENST00000421278 SLC4A1APQ9BWU0 796 aaKnown RBP14.34□□□□□ -0.11
UBAP2-207ENST00000421278 CSRNP3Q8WYN3 585 aa14.13□□□□□ -0.15
UBAP2-207ENST00000421278 NPM3O75607 178 aaKnown RBP14.07□□□□□ -0.16
UBAP2-207ENST00000421278 SCAF1Q9H7N4 1312 aaKnown RBP13.99□□□□□ -0.17
UBAP2-207ENST00000421278 CNKSR2Q8WXI2 1034 aa13.95□□□□□ -0.18
UBAP2-207ENST00000421278 MSH5O43196 834 aa13.85□□□□□ -0.19
UBAP2-207ENST00000421278 ZBTB22O15209 634 aa13.65□□□□□ -0.22
UBAP2-207ENST00000421278 MAPK8IP2Q13387 824 aaPredicted RBP13.6□□□□□ -0.23
UBAP2-207ENST00000421278 FOXD4L1Q9NU39 408 aa13.54□□□□□ -0.24
UBAP2-207ENST00000421278 RNF216Q9NWF9 866 aaPredicted RBP13.5□□□□□ -0.25
UBAP2-207ENST00000421278 DNAJC5BQ9UF47 199 aa13.46□□□□□ -0.25
UBAP2-207ENST00000421278 DMRT2Q9Y5R5 561 aa13.28□□□□□ -0.28
UBAP2-207ENST00000421278 HOXD11P31277 338 aaPredicted RBP13.24□□□□□ -0.29
UBAP2-207ENST00000421278 SLC4A2P04920 1241 aa13.09□□□□□ -0.31
UBAP2-207ENST00000421278 MYCNP04198 464 aaPredicted RBP13.03□□□□□ -0.32
UBAP2-207ENST00000421278 ATXN8OSP0DMR3 200 aa12.98□□□□□ -0.33
UBAP2-207ENST00000421278 DCAF8L1A6NGE4 600 aa12.82□□□□□ -0.36
UBAP2-207ENST00000421278 FKBP8Q14318 412 aa12.82□□□□□ -0.36
UBAP2-207ENST00000421278 AMER1Q5JTC6 1135 aaPredicted RBP12.82□□□□□ -0.36
UBAP2-207ENST00000421278 RTN4Q9NQC3 1192 aaKnown RBP12.77□□□□□ -0.37
UBAP2-207ENST00000421278 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.74□□□□□ -0.372e-6■■□□□ 13
UBAP2-207ENST00000421278 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.66□□□□□ -0.38
UBAP2-207ENST00000421278 HNRNPUL2Q1KMD3 747 aaKnown RBP12.66□□□□□ -0.38
UBAP2-207ENST00000421278 SLC24A1O60721 1099 aa12.64□□□□□ -0.39
UBAP2-207ENST00000421278 SAMD1Q6SPF0 538 aaPredicted RBP12.62□□□□□ -0.39
UBAP2-207ENST00000421278 ATF5Q9Y2D1 282 aaPredicted RBP12.57□□□□□ -0.4
UBAP2-207ENST00000421278 U3KPZ7 1027 aaPredicted RBP12.51□□□□□ -0.41
UBAP2-207ENST00000421278 APLP2Q06481 763 aa12.4□□□□□ -0.42
UBAP2-207ENST00000421278 ZNF219Q9P2Y4 722 aaPredicted RBP12.35□□□□□ -0.43
UBAP2-207ENST00000421278 NISCHQ9Y2I1 1504 aa12.26□□□□□ -0.45
UBAP2-207ENST00000421278 FBXO3Q9UK99 471 aa12.21□□□□□ -0.45
UBAP2-207ENST00000421278 SPDYE4A6NLX3 237 aa12.18□□□□□ -0.46
UBAP2-207ENST00000421278 FBLN2P98095 1184 aa12.12□□□□□ -0.47
UBAP2-207ENST00000421278 TRHP20396 242 aaPredicted RBP12.09□□□□□ -0.47
UBAP2-207ENST00000421278 MKRN4PQ13434 485 aaPredicted RBP12.05□□□□□ -0.48
UBAP2-207ENST00000421278 CAPN15O75808 1086 aa11.99□□□□□ -0.49
UBAP2-207ENST00000421278 POLA2Q14181 598 aa11.99□□□□□ -0.49
UBAP2-207ENST00000421278 SPINK5Q9NQ38 1064 aaPredicted RBP11.99□□□□□ -0.49
UBAP2-207ENST00000421278 VASPP50552 380 aaPredicted RBP11.98□□□□□ -0.49
UBAP2-207ENST00000421278 PROM2Q8N271 834 aa11.94□□□□□ -0.5
UBAP2-207ENST00000421278 DCAF8L2P0C7V8 631 aa11.89□□□□□ -0.51
UBAP2-207ENST00000421278 RNF39Q9H2S5 420 aa11.88□□□□□ -0.51
UBAP2-207ENST00000421278 ZBTB12Q9Y330 459 aaPredicted RBP11.87□□□□□ -0.51
UBAP2-207ENST00000421278 IFNLR1Q8IU57 520 aaPredicted RBP11.83□□□□□ -0.52
UBAP2-207ENST00000421278 C1QBPQ07021 282 aaKnown RBP11.81□□□□□ -0.52
UBAP2-207ENST00000421278 ABCB7O75027 752 aa11.8□□□□□ -0.52
UBAP2-207ENST00000421278 PLCB2Q00722 1185 aa11.8□□□□□ -0.52
UBAP2-207ENST00000421278 KLHL34Q8N239 644 aa11.72□□□□□ -0.53
UBAP2-207ENST00000421278 HAP1P54257 671 aaPredicted RBP11.71□□□□□ -0.53
UBAP2-207ENST00000421278 PKD2Q13563 968 aa11.66□□□□□ -0.54
UBAP2-207ENST00000421278 ZNF692Q9BU19 519 aaPredicted RBP11.66□□□□□ -0.54
UBAP2-207ENST00000421278 SPOCK2Q92563 424 aa11.64□□□□□ -0.55
UBAP2-207ENST00000421278 STAG3Q9UJ98 1225 aa11.62□□□□□ -0.55
UBAP2-207ENST00000421278 PLCD3Q8N3E9 789 aa11.6□□□□□ -0.55
UBAP2-207ENST00000421278 ECM2O94769 699 aaPredicted RBP11.58□□□□□ -0.56
UBAP2-207ENST00000421278 SPDYE2BA6NHP3 402 aa11.57□□□□□ -0.56
UBAP2-207ENST00000421278 SPDYE6P0CI01 402 aa11.57□□□□□ -0.56
UBAP2-207ENST00000421278 SPDYE2Q495Y8 402 aa11.57□□□□□ -0.56
UBAP2-207ENST00000421278 OSCARQ8IYS5 282 aa11.56□□□□□ -0.56
UBAP2-207ENST00000421278 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.55□□□□□ -0.56
UBAP2-207ENST00000421278 DSG3P32926 999 aa11.54□□□□□ -0.56
UBAP2-207ENST00000421278 MIER1Q8N108 512 aa11.52□□□□□ -0.57
UBAP2-207ENST00000421278 PABPN1Q86U42 306 aaKnown RBP eCLIP11.51□□□□□ -0.57
UBAP2-207ENST00000421278 SSUH2Q9Y2M2 353 aa11.5□□□□□ -0.57
UBAP2-207ENST00000421278 PLEKHG5O94827 1062 aa11.48□□□□□ -0.57
UBAP2-207ENST00000421278 VSIG10Q8N0Z9 540 aa11.48□□□□□ -0.57
UBAP2-207ENST00000421278 BBXQ8WY36 941 aaPredicted RBP11.48□□□□□ -0.57
UBAP2-207ENST00000421278 BCANQ96GW7 911 aa11.46□□□□□ -0.57
UBAP2-207ENST00000421278 POTEDQ86YR6 584 aa11.44□□□□□ -0.58
UBAP2-207ENST00000421278 PAXIP1Q6ZW49 1069 aaPredicted RBP11.43□□□□□ -0.58
UBAP2-207ENST00000421278 CFAP44Q96MT7 982 aa11.43□□□□□ -0.58
UBAP2-207ENST00000421278 ZBTB47Q9UFB7 747 aaPredicted RBP11.41□□□□□ -0.58
UBAP2-207ENST00000421278 CIZ1Q9ULV3 898 aaPredicted RBP11.4□□□□□ -0.58
UBAP2-207ENST00000421278 RGL2O15211 777 aa11.38□□□□□ -0.59
UBAP2-207ENST00000421278 NPM1P06748 294 aaKnown RBP eCLIP11.36□□□□□ -0.59
UBAP2-207ENST00000421278 SPRYD3Q8NCJ5 442 aa11.32□□□□□ -0.6
UBAP2-207ENST00000421278 ABCC9O60706 1549 aa11.3□□□□□ -0.6
UBAP2-207ENST00000421278 CHGAP10645 457 aaKnown RBP11.29□□□□□ -0.6
UBAP2-207ENST00000421278 TRIM41Q8WV44 630 aa11.27□□□□□ -0.61
UBAP2-207ENST00000421278 KDM2AQ9Y2K7 1162 aa11.26□□□□□ -0.61
UBAP2-207ENST00000421278 TAOK2Q9UL54 1235 aa11.25□□□□□ -0.61
UBAP2-207ENST00000421278 CCDC180Q9P1Z9 1646 aa11.22□□□□□ -0.61
UBAP2-207ENST00000421278 PRKCSHP14314 528 aaPredicted RBP11.21□□□□□ -0.61
UBAP2-207ENST00000421278 CACNB1Q02641 598 aaPredicted RBP11.2□□□□□ -0.62
UBAP2-207ENST00000421278 GSE1Q14687 1217 aa11.19□□□□□ -0.62
UBAP2-207ENST00000421278 TSHZ2Q9NRE2 1034 aa11.19□□□□□ -0.62
UBAP2-207ENST00000421278 HS6ST3Q8IZP7 471 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms