Protein–RNA interactions for Protein: Q9HCJ2

LRRC4C, Leucine-rich repeat-containing protein 4C, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC4CQ9HCJ2 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
LRRC4CQ9HCJ2 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
LRRC4CQ9HCJ2 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC26.57■■□□□ 1.84
LRRC4CQ9HCJ2 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC26.57■■□□□ 1.84
LRRC4CQ9HCJ2 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
LRRC4CQ9HCJ2 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC26.56■■□□□ 1.84
LRRC4CQ9HCJ2 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC26.56■■□□□ 1.84
LRRC4CQ9HCJ2 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
LRRC4CQ9HCJ2 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
LRRC4CQ9HCJ2 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
LRRC4CQ9HCJ2 AC135731.1-201ENST00000569415 2548 ntBASIC26.55■■□□□ 1.84
LRRC4CQ9HCJ2 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
LRRC4CQ9HCJ2 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC26.54■■□□□ 1.84
LRRC4CQ9HCJ2 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
LRRC4CQ9HCJ2 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC26.53■■□□□ 1.84
LRRC4CQ9HCJ2 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
LRRC4CQ9HCJ2 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC26.53■■□□□ 1.84
LRRC4CQ9HCJ2 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
LRRC4CQ9HCJ2 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
LRRC4CQ9HCJ2 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC26.52■■□□□ 1.84
LRRC4CQ9HCJ2 AC010864.1-201ENST00000609407 1511 ntBASIC26.52■■□□□ 1.84
LRRC4CQ9HCJ2 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC26.51■■□□□ 1.83
LRRC4CQ9HCJ2 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
LRRC4CQ9HCJ2 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC26.51■■□□□ 1.83
LRRC4CQ9HCJ2 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
LRRC4CQ9HCJ2 SHF-207ENST00000560540 2062 ntTSL 5 BASIC26.5■■□□□ 1.83
LRRC4CQ9HCJ2 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
LRRC4CQ9HCJ2 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
LRRC4CQ9HCJ2 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC26.49■■□□□ 1.83
LRRC4CQ9HCJ2 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
LRRC4CQ9HCJ2 RARRES2P7-201ENST00000567349 469 ntBASIC26.48■■□□□ 1.83
LRRC4CQ9HCJ2 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
LRRC4CQ9HCJ2 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
LRRC4CQ9HCJ2 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
LRRC4CQ9HCJ2 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC26.47■■□□□ 1.83
LRRC4CQ9HCJ2 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC26.46■■□□□ 1.83
LRRC4CQ9HCJ2 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC26.45■■□□□ 1.82
LRRC4CQ9HCJ2 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
LRRC4CQ9HCJ2 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC26.45■■□□□ 1.82
LRRC4CQ9HCJ2 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
LRRC4CQ9HCJ2 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC26.44■■□□□ 1.82
LRRC4CQ9HCJ2 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
LRRC4CQ9HCJ2 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
LRRC4CQ9HCJ2 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
LRRC4CQ9HCJ2 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC26.43■■□□□ 1.82
LRRC4CQ9HCJ2 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
LRRC4CQ9HCJ2 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC26.42■■□□□ 1.82
LRRC4CQ9HCJ2 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC26.42■■□□□ 1.82
LRRC4CQ9HCJ2 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
LRRC4CQ9HCJ2 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
LRRC4CQ9HCJ2 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC26.41■■□□□ 1.82
LRRC4CQ9HCJ2 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
LRRC4CQ9HCJ2 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
LRRC4CQ9HCJ2 RPS2P35-201ENST00000443417 897 ntBASIC26.41■■□□□ 1.82
LRRC4CQ9HCJ2 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC26.41■■□□□ 1.82
LRRC4CQ9HCJ2 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC26.4■■□□□ 1.82
LRRC4CQ9HCJ2 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC26.4■■□□□ 1.82
LRRC4CQ9HCJ2 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC26.39■■□□□ 1.82
LRRC4CQ9HCJ2 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC26.39■■□□□ 1.82
LRRC4CQ9HCJ2 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC26.39■■□□□ 1.81
LRRC4CQ9HCJ2 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC26.39■■□□□ 1.81
LRRC4CQ9HCJ2 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
LRRC4CQ9HCJ2 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
LRRC4CQ9HCJ2 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
LRRC4CQ9HCJ2 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC26.36■■□□□ 1.81
LRRC4CQ9HCJ2 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
LRRC4CQ9HCJ2 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC26.35■■□□□ 1.81
LRRC4CQ9HCJ2 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
LRRC4CQ9HCJ2 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
LRRC4CQ9HCJ2 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
LRRC4CQ9HCJ2 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC26.33■■□□□ 1.81
LRRC4CQ9HCJ2 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
LRRC4CQ9HCJ2 AC097358.2-201ENST00000607541 1159 ntBASIC26.32■■□□□ 1.8
LRRC4CQ9HCJ2 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
LRRC4CQ9HCJ2 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC26.31■■□□□ 1.8
LRRC4CQ9HCJ2 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC26.31■■□□□ 1.8
LRRC4CQ9HCJ2 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
LRRC4CQ9HCJ2 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC26.31■■□□□ 1.8
LRRC4CQ9HCJ2 CREM-210ENST00000374721 2020 ntTSL 5 BASIC26.3■■□□□ 1.8
LRRC4CQ9HCJ2 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
LRRC4CQ9HCJ2 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
LRRC4CQ9HCJ2 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
LRRC4CQ9HCJ2 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC26.29■■□□□ 1.8
LRRC4CQ9HCJ2 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
LRRC4CQ9HCJ2 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
LRRC4CQ9HCJ2 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
LRRC4CQ9HCJ2 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC26.28■■□□□ 1.8
LRRC4CQ9HCJ2 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
LRRC4CQ9HCJ2 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC26.28■■□□□ 1.8
LRRC4CQ9HCJ2 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
LRRC4CQ9HCJ2 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
LRRC4CQ9HCJ2 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
LRRC4CQ9HCJ2 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
LRRC4CQ9HCJ2 BX255925.1-201ENST00000566954 1854 ntBASIC26.26■■□□□ 1.79
LRRC4CQ9HCJ2 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC26.26■■□□□ 1.79
LRRC4CQ9HCJ2 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
LRRC4CQ9HCJ2 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC26.25■■□□□ 1.79
LRRC4CQ9HCJ2 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
LRRC4CQ9HCJ2 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
LRRC4CQ9HCJ2 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms