Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
RNF138Q8WVD3 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC23.77■■□□□ 1.4
RNF138Q8WVD3 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
RNF138Q8WVD3 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RNF138Q8WVD3 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC23.76■■□□□ 1.39
RNF138Q8WVD3 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RNF138Q8WVD3 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
RNF138Q8WVD3 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RNF138Q8WVD3 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RNF138Q8WVD3 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RNF138Q8WVD3 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC23.75■■□□□ 1.39
RNF138Q8WVD3 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC23.75■■□□□ 1.39
RNF138Q8WVD3 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
RNF138Q8WVD3 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
RNF138Q8WVD3 LINC00273-201ENST00000539813 1452 ntBASIC23.75■■□□□ 1.39
RNF138Q8WVD3 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
RNF138Q8WVD3 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC23.74■■□□□ 1.39
RNF138Q8WVD3 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RNF138Q8WVD3 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RNF138Q8WVD3 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
RNF138Q8WVD3 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
RNF138Q8WVD3 CALM3-209ENST00000597743 577 ntTSL 4 BASIC23.72■■□□□ 1.39
RNF138Q8WVD3 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC23.72■■□□□ 1.39
RNF138Q8WVD3 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RNF138Q8WVD3 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RNF138Q8WVD3 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
RNF138Q8WVD3 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RNF138Q8WVD3 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RNF138Q8WVD3 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC23.71■■□□□ 1.39
RNF138Q8WVD3 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC23.7■■□□□ 1.38
RNF138Q8WVD3 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC23.7■■□□□ 1.38
RNF138Q8WVD3 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC23.7■■□□□ 1.38
RNF138Q8WVD3 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
RNF138Q8WVD3 AP004833.2-201ENST00000532228 1454 ntBASIC23.69■■□□□ 1.38
RNF138Q8WVD3 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
RNF138Q8WVD3 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC23.69■■□□□ 1.38
RNF138Q8WVD3 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
RNF138Q8WVD3 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC23.68■■□□□ 1.38
RNF138Q8WVD3 ABHD17AP4-201ENST00000411545 909 ntBASIC23.68■■□□□ 1.38
RNF138Q8WVD3 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
RNF138Q8WVD3 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RNF138Q8WVD3 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
RNF138Q8WVD3 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
RNF138Q8WVD3 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
RNF138Q8WVD3 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
RNF138Q8WVD3 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
RNF138Q8WVD3 AC135983.2-203ENST00000454486 1613 ntBASIC23.66■■□□□ 1.38
RNF138Q8WVD3 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC23.66■■□□□ 1.38
RNF138Q8WVD3 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
RNF138Q8WVD3 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC23.66■■□□□ 1.38
RNF138Q8WVD3 AL139393.2-201ENST00000608721 2025 ntBASIC23.66■■□□□ 1.38
RNF138Q8WVD3 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC23.66■■□□□ 1.38
RNF138Q8WVD3 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
RNF138Q8WVD3 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
RNF138Q8WVD3 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
RNF138Q8WVD3 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
RNF138Q8WVD3 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC23.65■■□□□ 1.38
RNF138Q8WVD3 ZNRF2P2-203ENST00000454624 420 ntBASIC23.64■■□□□ 1.37
RNF138Q8WVD3 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC23.64■■□□□ 1.37
RNF138Q8WVD3 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC23.64■■□□□ 1.37
RNF138Q8WVD3 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
RNF138Q8WVD3 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC23.62■■□□□ 1.37
RNF138Q8WVD3 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RNF138Q8WVD3 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
RNF138Q8WVD3 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
RNF138Q8WVD3 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC23.6■■□□□ 1.37
RNF138Q8WVD3 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC23.6■■□□□ 1.37
RNF138Q8WVD3 WHAMMP2-203ENST00000563942 1603 ntBASIC23.59■■□□□ 1.37
RNF138Q8WVD3 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
RNF138Q8WVD3 LINC01971-201ENST00000617888 1048 ntBASIC23.59■■□□□ 1.37
RNF138Q8WVD3 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RNF138Q8WVD3 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC23.58■■□□□ 1.37
RNF138Q8WVD3 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
RNF138Q8WVD3 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC23.57■■□□□ 1.36
RNF138Q8WVD3 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
RNF138Q8WVD3 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
RNF138Q8WVD3 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
RNF138Q8WVD3 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
RNF138Q8WVD3 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
RNF138Q8WVD3 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
RNF138Q8WVD3 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RNF138Q8WVD3 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC23.55■■□□□ 1.36
RNF138Q8WVD3 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC23.55■■□□□ 1.36
RNF138Q8WVD3 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC23.55■■□□□ 1.36
RNF138Q8WVD3 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC23.55■■□□□ 1.36
RNF138Q8WVD3 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
RNF138Q8WVD3 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC23.54■■□□□ 1.36
RNF138Q8WVD3 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC23.54■■□□□ 1.36
RNF138Q8WVD3 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RNF138Q8WVD3 ABCB10P3-201ENST00000561950 2166 ntBASIC23.54■■□□□ 1.36
RNF138Q8WVD3 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
RNF138Q8WVD3 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
RNF138Q8WVD3 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC23.53■■□□□ 1.36
RNF138Q8WVD3 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
RNF138Q8WVD3 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
RNF138Q8WVD3 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RNF138Q8WVD3 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC23.52■■□□□ 1.36
RNF138Q8WVD3 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
RNF138Q8WVD3 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RNF138Q8WVD3 MEST-211ENST00000437945 1455 ntTSL 5 BASIC23.51■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 7.8 ms