Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC25.57■■□□□ 1.68
RFWD2Q8NHY2 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC25.57■■□□□ 1.68
RFWD2Q8NHY2 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
RFWD2Q8NHY2 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
RFWD2Q8NHY2 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
RFWD2Q8NHY2 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC25.56■■□□□ 1.68
RFWD2Q8NHY2 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
RFWD2Q8NHY2 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
RFWD2Q8NHY2 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC25.55■■□□□ 1.68
RFWD2Q8NHY2 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
RFWD2Q8NHY2 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
RFWD2Q8NHY2 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC25.54■■□□□ 1.68
RFWD2Q8NHY2 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC25.54■■□□□ 1.68
RFWD2Q8NHY2 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
RFWD2Q8NHY2 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC25.54■■□□□ 1.68
RFWD2Q8NHY2 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
RFWD2Q8NHY2 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
RFWD2Q8NHY2 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
RFWD2Q8NHY2 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC25.53■■□□□ 1.68
RFWD2Q8NHY2 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
RFWD2Q8NHY2 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC25.53■■□□□ 1.68
RFWD2Q8NHY2 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
RFWD2Q8NHY2 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC25.52■■□□□ 1.68
RFWD2Q8NHY2 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
RFWD2Q8NHY2 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
RFWD2Q8NHY2 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
RFWD2Q8NHY2 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC25.51■■□□□ 1.67
RFWD2Q8NHY2 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC25.51■■□□□ 1.67
RFWD2Q8NHY2 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC25.51■■□□□ 1.67
RFWD2Q8NHY2 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
RFWD2Q8NHY2 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC25.5■■□□□ 1.67
RFWD2Q8NHY2 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC25.5■■□□□ 1.67
RFWD2Q8NHY2 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC25.49■■□□□ 1.67
RFWD2Q8NHY2 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
RFWD2Q8NHY2 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
RFWD2Q8NHY2 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
RFWD2Q8NHY2 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
RFWD2Q8NHY2 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
RFWD2Q8NHY2 BX255925.1-201ENST00000566954 1854 ntBASIC25.47■■□□□ 1.67
RFWD2Q8NHY2 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC25.46■■□□□ 1.67
RFWD2Q8NHY2 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC25.46■■□□□ 1.67
RFWD2Q8NHY2 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC25.43■■□□□ 1.66
RFWD2Q8NHY2 AC010864.1-201ENST00000609407 1511 ntBASIC25.43■■□□□ 1.66
RFWD2Q8NHY2 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC25.43■■□□□ 1.66
RFWD2Q8NHY2 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC25.43■■□□□ 1.66
RFWD2Q8NHY2 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
RFWD2Q8NHY2 WASH5P-204ENST00000632292 975 ntBASIC25.42■■□□□ 1.66
RFWD2Q8NHY2 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC25.42■■□□□ 1.66
RFWD2Q8NHY2 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
RFWD2Q8NHY2 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
RFWD2Q8NHY2 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC25.41■■□□□ 1.66
RFWD2Q8NHY2 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC25.41■■□□□ 1.66
RFWD2Q8NHY2 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC25.4■■□□□ 1.66
RFWD2Q8NHY2 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC25.4■■□□□ 1.66
RFWD2Q8NHY2 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC25.4■■□□□ 1.66
RFWD2Q8NHY2 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC25.4■■□□□ 1.66
RFWD2Q8NHY2 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC25.4■■□□□ 1.66
RFWD2Q8NHY2 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
RFWD2Q8NHY2 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
RFWD2Q8NHY2 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
RFWD2Q8NHY2 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.65
RFWD2Q8NHY2 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
RFWD2Q8NHY2 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
RFWD2Q8NHY2 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
RFWD2Q8NHY2 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC25.38■■□□□ 1.65
RFWD2Q8NHY2 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC25.38■■□□□ 1.65
RFWD2Q8NHY2 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
RFWD2Q8NHY2 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
RFWD2Q8NHY2 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
RFWD2Q8NHY2 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC25.37■■□□□ 1.65
RFWD2Q8NHY2 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC25.37■■□□□ 1.65
RFWD2Q8NHY2 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
RFWD2Q8NHY2 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC25.36■■□□□ 1.65
RFWD2Q8NHY2 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC25.36■■□□□ 1.65
RFWD2Q8NHY2 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
RFWD2Q8NHY2 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
RFWD2Q8NHY2 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
RFWD2Q8NHY2 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
RFWD2Q8NHY2 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
RFWD2Q8NHY2 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
RFWD2Q8NHY2 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC25.35■■□□□ 1.65
RFWD2Q8NHY2 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC25.34■■□□□ 1.65
RFWD2Q8NHY2 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
RFWD2Q8NHY2 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
RFWD2Q8NHY2 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
RFWD2Q8NHY2 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
RFWD2Q8NHY2 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
RFWD2Q8NHY2 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC25.33■■□□□ 1.65
RFWD2Q8NHY2 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
RFWD2Q8NHY2 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC25.33■■□□□ 1.64
RFWD2Q8NHY2 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC25.32■■□□□ 1.64
RFWD2Q8NHY2 SHF-208ENST00000560734 1731 ntTSL 3 BASIC25.32■■□□□ 1.64
RFWD2Q8NHY2 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC25.31■■□□□ 1.64
RFWD2Q8NHY2 PROC-203ENST00000409048 1586 ntTSL 5 BASIC25.31■■□□□ 1.64
RFWD2Q8NHY2 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
RFWD2Q8NHY2 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC25.31■■□□□ 1.64
RFWD2Q8NHY2 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
RFWD2Q8NHY2 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
RFWD2Q8NHY2 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC25.29■■□□□ 1.64
RFWD2Q8NHY2 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC25.29■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms