Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC26.57■■□□□ 1.84
CCDC25Q86WR0 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC26.57■■□□□ 1.84
CCDC25Q86WR0 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC26.57■■□□□ 1.84
CCDC25Q86WR0 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC26.56■■□□□ 1.84
CCDC25Q86WR0 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC26.56■■□□□ 1.84
CCDC25Q86WR0 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC26.56■■□□□ 1.84
CCDC25Q86WR0 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC26.56■■□□□ 1.84
CCDC25Q86WR0 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CCDC25Q86WR0 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC26.55■■□□□ 1.84
CCDC25Q86WR0 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CCDC25Q86WR0 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
CCDC25Q86WR0 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
CCDC25Q86WR0 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
CCDC25Q86WR0 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
CCDC25Q86WR0 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
CCDC25Q86WR0 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC26.52■■□□□ 1.84
CCDC25Q86WR0 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC26.52■■□□□ 1.84
CCDC25Q86WR0 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC26.51■■□□□ 1.84
CCDC25Q86WR0 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC26.51■■□□□ 1.84
CCDC25Q86WR0 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CCDC25Q86WR0 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CCDC25Q86WR0 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC26.51■■□□□ 1.83
CCDC25Q86WR0 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
CCDC25Q86WR0 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CCDC25Q86WR0 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC26.51■■□□□ 1.83
CCDC25Q86WR0 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CCDC25Q86WR0 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CCDC25Q86WR0 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC26.49■■□□□ 1.83
CCDC25Q86WR0 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
CCDC25Q86WR0 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC26.49■■□□□ 1.83
CCDC25Q86WR0 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC26.49■■□□□ 1.83
CCDC25Q86WR0 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
CCDC25Q86WR0 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
CCDC25Q86WR0 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
CCDC25Q86WR0 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
CCDC25Q86WR0 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC26.47■■□□□ 1.83
CCDC25Q86WR0 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
CCDC25Q86WR0 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
CCDC25Q86WR0 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CCDC25Q86WR0 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC26.46■■□□□ 1.83
CCDC25Q86WR0 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC26.45■■□□□ 1.83
CCDC25Q86WR0 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
CCDC25Q86WR0 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC26.45■■□□□ 1.82
CCDC25Q86WR0 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
CCDC25Q86WR0 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
CCDC25Q86WR0 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC26.44■■□□□ 1.82
CCDC25Q86WR0 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC26.44■■□□□ 1.82
CCDC25Q86WR0 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
CCDC25Q86WR0 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
CCDC25Q86WR0 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC26.42■■□□□ 1.82
CCDC25Q86WR0 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC26.41■■□□□ 1.82
CCDC25Q86WR0 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
CCDC25Q86WR0 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
CCDC25Q86WR0 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC26.4■■□□□ 1.82
CCDC25Q86WR0 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
CCDC25Q86WR0 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
CCDC25Q86WR0 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
CCDC25Q86WR0 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.82
CCDC25Q86WR0 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
CCDC25Q86WR0 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC26.39■■□□□ 1.82
CCDC25Q86WR0 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC26.39■■□□□ 1.81
CCDC25Q86WR0 BX255925.1-201ENST00000566954 1854 ntBASIC26.38■■□□□ 1.81
CCDC25Q86WR0 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CCDC25Q86WR0 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC26.38■■□□□ 1.81
CCDC25Q86WR0 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC26.38■■□□□ 1.81
CCDC25Q86WR0 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CCDC25Q86WR0 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
CCDC25Q86WR0 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC26.38■■□□□ 1.81
CCDC25Q86WR0 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
CCDC25Q86WR0 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CCDC25Q86WR0 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC26.36■■□□□ 1.81
CCDC25Q86WR0 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC26.36■■□□□ 1.81
CCDC25Q86WR0 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
CCDC25Q86WR0 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CCDC25Q86WR0 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC26.36■■□□□ 1.81
CCDC25Q86WR0 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CCDC25Q86WR0 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
CCDC25Q86WR0 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CCDC25Q86WR0 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
CCDC25Q86WR0 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CCDC25Q86WR0 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
CCDC25Q86WR0 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC26.34■■□□□ 1.81
CCDC25Q86WR0 CREM-210ENST00000374721 2020 ntTSL 5 BASIC26.34■■□□□ 1.81
CCDC25Q86WR0 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
CCDC25Q86WR0 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
CCDC25Q86WR0 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CCDC25Q86WR0 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CCDC25Q86WR0 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC26.33■■□□□ 1.81
CCDC25Q86WR0 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
CCDC25Q86WR0 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
CCDC25Q86WR0 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC26.32■■□□□ 1.8
CCDC25Q86WR0 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CCDC25Q86WR0 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC26.32■■□□□ 1.8
CCDC25Q86WR0 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC26.32■■□□□ 1.8
CCDC25Q86WR0 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
CCDC25Q86WR0 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
CCDC25Q86WR0 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CCDC25Q86WR0 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC26.31■■□□□ 1.8
CCDC25Q86WR0 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CCDC25Q86WR0 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms