Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CD3DP04234 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC21.98■■□□□ 1.11
CD3DP04234 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CD3DP04234 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
CD3DP04234 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
CD3DP04234 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC21.97■■□□□ 1.11
CD3DP04234 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC21.97■■□□□ 1.11
CD3DP04234 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC21.97■■□□□ 1.11
CD3DP04234 BX255925.1-201ENST00000566954 1854 ntBASIC21.96■■□□□ 1.11
CD3DP04234 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CD3DP04234 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CD3DP04234 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC21.96■■□□□ 1.11
CD3DP04234 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CD3DP04234 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CD3DP04234 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CD3DP04234 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CD3DP04234 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CD3DP04234 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
CD3DP04234 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CD3DP04234 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC21.94■■□□□ 1.1
CD3DP04234 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
CD3DP04234 ZNRF2P1-201ENST00000441407 443 ntBASIC21.94■■□□□ 1.1
CD3DP04234 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CD3DP04234 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CD3DP04234 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.94■■□□□ 1.1
CD3DP04234 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CD3DP04234 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CD3DP04234 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC21.93■■□□□ 1.1
CD3DP04234 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CD3DP04234 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CD3DP04234 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CD3DP04234 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CD3DP04234 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
CD3DP04234 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC21.91■■□□□ 1.1
CD3DP04234 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CD3DP04234 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
CD3DP04234 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
CD3DP04234 AL031258.1-201ENST00000623562 325 ntBASIC21.9■■□□□ 1.1
CD3DP04234 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CD3DP04234 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
CD3DP04234 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.1
CD3DP04234 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.1
CD3DP04234 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC21.89■■□□□ 1.09
CD3DP04234 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
CD3DP04234 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.87■■□□□ 1.09
CD3DP04234 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CD3DP04234 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CD3DP04234 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CD3DP04234 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CD3DP04234 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC21.87■■□□□ 1.09
CD3DP04234 AC010864.1-201ENST00000609407 1511 ntBASIC21.86■■□□□ 1.09
CD3DP04234 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.86■■□□□ 1.09
CD3DP04234 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
CD3DP04234 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
CD3DP04234 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC21.86■■□□□ 1.09
CD3DP04234 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CD3DP04234 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC21.85■■□□□ 1.09
CD3DP04234 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
CD3DP04234 SHF-208ENST00000560734 1731 ntTSL 3 BASIC21.84■■□□□ 1.09
CD3DP04234 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.84■■□□□ 1.09
CD3DP04234 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
CD3DP04234 PROC-203ENST00000409048 1586 ntTSL 5 BASIC21.83■■□□□ 1.09
CD3DP04234 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CD3DP04234 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CD3DP04234 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CD3DP04234 WASH5P-204ENST00000632292 975 ntBASIC21.83■■□□□ 1.09
CD3DP04234 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CD3DP04234 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
CD3DP04234 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CD3DP04234 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
CD3DP04234 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CD3DP04234 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CD3DP04234 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CD3DP04234 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
CD3DP04234 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CD3DP04234 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC21.81■■□□□ 1.08
CD3DP04234 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC21.81■■□□□ 1.08
CD3DP04234 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CD3DP04234 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.8■■□□□ 1.08
CD3DP04234 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC21.8■■□□□ 1.08
CD3DP04234 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC21.8■■□□□ 1.08
CD3DP04234 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
CD3DP04234 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.8■■□□□ 1.08
CD3DP04234 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.79■■□□□ 1.08
CD3DP04234 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC21.79■■□□□ 1.08
CD3DP04234 AL449106.1-201ENST00000608517 1980 ntBASIC21.79■■□□□ 1.08
CD3DP04234 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CD3DP04234 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CD3DP04234 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CD3DP04234 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CD3DP04234 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CD3DP04234 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC21.77■■□□□ 1.08
CD3DP04234 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CD3DP04234 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CD3DP04234 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.76■■□□□ 1.07
CD3DP04234 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.76■■□□□ 1.07
CD3DP04234 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CD3DP04234 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CD3DP04234 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CD3DP04234 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms