Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NDUFA1O15239 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
NDUFA1O15239 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NDUFA1O15239 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NDUFA1O15239 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NDUFA1O15239 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NDUFA1O15239 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC17.62■□□□□ 0.41
NDUFA1O15239 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NDUFA1O15239 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NDUFA1O15239 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NDUFA1O15239 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NDUFA1O15239 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NDUFA1O15239 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NDUFA1O15239 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NDUFA1O15239 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NDUFA1O15239 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC17.59■□□□□ 0.41
NDUFA1O15239 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
NDUFA1O15239 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
NDUFA1O15239 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC17.58■□□□□ 0.41
NDUFA1O15239 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC17.58■□□□□ 0.41
NDUFA1O15239 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC17.58■□□□□ 0.4
NDUFA1O15239 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NDUFA1O15239 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NDUFA1O15239 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NDUFA1O15239 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NDUFA1O15239 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
NDUFA1O15239 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NDUFA1O15239 KLF16-203ENST00000592313 508 ntTSL 3 BASIC17.56■□□□□ 0.4
NDUFA1O15239 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NDUFA1O15239 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NDUFA1O15239 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
NDUFA1O15239 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NDUFA1O15239 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
NDUFA1O15239 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC17.55■□□□□ 0.4
NDUFA1O15239 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NDUFA1O15239 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
NDUFA1O15239 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NDUFA1O15239 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
NDUFA1O15239 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NDUFA1O15239 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NDUFA1O15239 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NDUFA1O15239 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NDUFA1O15239 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NDUFA1O15239 BX255925.1-201ENST00000566954 1854 ntBASIC17.53■□□□□ 0.4
NDUFA1O15239 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NDUFA1O15239 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC17.52■□□□□ 0.4
NDUFA1O15239 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NDUFA1O15239 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC17.51■□□□□ 0.39
NDUFA1O15239 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC17.51■□□□□ 0.39
NDUFA1O15239 WASH5P-204ENST00000632292 975 ntBASIC17.51■□□□□ 0.39
NDUFA1O15239 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC17.51■□□□□ 0.39
NDUFA1O15239 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
NDUFA1O15239 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NDUFA1O15239 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC17.5■□□□□ 0.39
NDUFA1O15239 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC17.5■□□□□ 0.39
NDUFA1O15239 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
NDUFA1O15239 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NDUFA1O15239 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
NDUFA1O15239 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NDUFA1O15239 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
NDUFA1O15239 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
NDUFA1O15239 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
NDUFA1O15239 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NDUFA1O15239 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC17.47■□□□□ 0.39
NDUFA1O15239 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NDUFA1O15239 SHF-208ENST00000560734 1731 ntTSL 3 BASIC17.47■□□□□ 0.39
NDUFA1O15239 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
NDUFA1O15239 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC17.47■□□□□ 0.39
NDUFA1O15239 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NDUFA1O15239 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NDUFA1O15239 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NDUFA1O15239 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NDUFA1O15239 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NDUFA1O15239 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
NDUFA1O15239 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NDUFA1O15239 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
NDUFA1O15239 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC17.46■□□□□ 0.39
NDUFA1O15239 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
NDUFA1O15239 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NDUFA1O15239 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
NDUFA1O15239 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC17.45■□□□□ 0.38
NDUFA1O15239 AL133380.1-201ENST00000506013 324 ntBASIC17.45■□□□□ 0.38
NDUFA1O15239 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
NDUFA1O15239 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NDUFA1O15239 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
NDUFA1O15239 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NDUFA1O15239 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NDUFA1O15239 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
NDUFA1O15239 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NDUFA1O15239 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
NDUFA1O15239 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
NDUFA1O15239 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
NDUFA1O15239 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
NDUFA1O15239 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC17.42■□□□□ 0.38
NDUFA1O15239 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NDUFA1O15239 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NDUFA1O15239 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
NDUFA1O15239 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NDUFA1O15239 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
NDUFA1O15239 PROC-203ENST00000409048 1586 ntTSL 5 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 13 ms