Protein–RNA interactions for Protein: A0A0C4DH25

IGKV3D-20, Immunoglobulin kappa variable 3D-20, humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-20A0A0C4DH25 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
IGKV3D-20A0A0C4DH25 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
IGKV3D-20A0A0C4DH25 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
IGKV3D-20A0A0C4DH25 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
IGKV3D-20A0A0C4DH25 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
IGKV3D-20A0A0C4DH25 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
IGKV3D-20A0A0C4DH25 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC19.16■□□□□ 0.66
IGKV3D-20A0A0C4DH25 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
IGKV3D-20A0A0C4DH25 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
IGKV3D-20A0A0C4DH25 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
IGKV3D-20A0A0C4DH25 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
IGKV3D-20A0A0C4DH25 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
IGKV3D-20A0A0C4DH25 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
IGKV3D-20A0A0C4DH25 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
IGKV3D-20A0A0C4DH25 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
IGKV3D-20A0A0C4DH25 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
IGKV3D-20A0A0C4DH25 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
IGKV3D-20A0A0C4DH25 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
IGKV3D-20A0A0C4DH25 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
IGKV3D-20A0A0C4DH25 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
IGKV3D-20A0A0C4DH25 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
IGKV3D-20A0A0C4DH25 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
IGKV3D-20A0A0C4DH25 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
IGKV3D-20A0A0C4DH25 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC19.12■□□□□ 0.65
IGKV3D-20A0A0C4DH25 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
IGKV3D-20A0A0C4DH25 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
IGKV3D-20A0A0C4DH25 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
IGKV3D-20A0A0C4DH25 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
IGKV3D-20A0A0C4DH25 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
IGKV3D-20A0A0C4DH25 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC19.11■□□□□ 0.65
IGKV3D-20A0A0C4DH25 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
IGKV3D-20A0A0C4DH25 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC19.1■□□□□ 0.65
IGKV3D-20A0A0C4DH25 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
IGKV3D-20A0A0C4DH25 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC19.1■□□□□ 0.65
IGKV3D-20A0A0C4DH25 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
IGKV3D-20A0A0C4DH25 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC19.1■□□□□ 0.65
IGKV3D-20A0A0C4DH25 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
IGKV3D-20A0A0C4DH25 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
IGKV3D-20A0A0C4DH25 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
IGKV3D-20A0A0C4DH25 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
IGKV3D-20A0A0C4DH25 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
IGKV3D-20A0A0C4DH25 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC19.08■□□□□ 0.64
IGKV3D-20A0A0C4DH25 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
IGKV3D-20A0A0C4DH25 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
IGKV3D-20A0A0C4DH25 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
IGKV3D-20A0A0C4DH25 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
IGKV3D-20A0A0C4DH25 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
IGKV3D-20A0A0C4DH25 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
IGKV3D-20A0A0C4DH25 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
IGKV3D-20A0A0C4DH25 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
IGKV3D-20A0A0C4DH25 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
IGKV3D-20A0A0C4DH25 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
IGKV3D-20A0A0C4DH25 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
IGKV3D-20A0A0C4DH25 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC19.05■□□□□ 0.64
IGKV3D-20A0A0C4DH25 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
IGKV3D-20A0A0C4DH25 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC19.05■□□□□ 0.64
IGKV3D-20A0A0C4DH25 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
IGKV3D-20A0A0C4DH25 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
IGKV3D-20A0A0C4DH25 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC19.04■□□□□ 0.64
IGKV3D-20A0A0C4DH25 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
IGKV3D-20A0A0C4DH25 BX255925.1-201ENST00000566954 1854 ntBASIC19.03■□□□□ 0.64
IGKV3D-20A0A0C4DH25 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
IGKV3D-20A0A0C4DH25 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
IGKV3D-20A0A0C4DH25 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
IGKV3D-20A0A0C4DH25 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
IGKV3D-20A0A0C4DH25 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC19.03■□□□□ 0.64
IGKV3D-20A0A0C4DH25 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
IGKV3D-20A0A0C4DH25 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
IGKV3D-20A0A0C4DH25 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC19.02■□□□□ 0.64
IGKV3D-20A0A0C4DH25 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
IGKV3D-20A0A0C4DH25 AP004833.2-201ENST00000532228 1454 ntBASIC19.02■□□□□ 0.63
IGKV3D-20A0A0C4DH25 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
IGKV3D-20A0A0C4DH25 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
IGKV3D-20A0A0C4DH25 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
IGKV3D-20A0A0C4DH25 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC19.01■□□□□ 0.63
IGKV3D-20A0A0C4DH25 PROC-203ENST00000409048 1586 ntTSL 5 BASIC19.01■□□□□ 0.63
IGKV3D-20A0A0C4DH25 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
IGKV3D-20A0A0C4DH25 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
IGKV3D-20A0A0C4DH25 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
IGKV3D-20A0A0C4DH25 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
IGKV3D-20A0A0C4DH25 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC19■□□□□ 0.63
IGKV3D-20A0A0C4DH25 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC19■□□□□ 0.63
IGKV3D-20A0A0C4DH25 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
IGKV3D-20A0A0C4DH25 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC19■□□□□ 0.63
IGKV3D-20A0A0C4DH25 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
IGKV3D-20A0A0C4DH25 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
IGKV3D-20A0A0C4DH25 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC18.99■□□□□ 0.63
IGKV3D-20A0A0C4DH25 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
IGKV3D-20A0A0C4DH25 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
IGKV3D-20A0A0C4DH25 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
IGKV3D-20A0A0C4DH25 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
IGKV3D-20A0A0C4DH25 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
IGKV3D-20A0A0C4DH25 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
IGKV3D-20A0A0C4DH25 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
IGKV3D-20A0A0C4DH25 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
IGKV3D-20A0A0C4DH25 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
IGKV3D-20A0A0C4DH25 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC18.98■□□□□ 0.63
IGKV3D-20A0A0C4DH25 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
IGKV3D-20A0A0C4DH25 CREM-210ENST00000374721 2020 ntTSL 5 BASIC18.97■□□□□ 0.63
IGKV3D-20A0A0C4DH25 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms