Protein–RNA interactions for Protein: A0A0B4J234

TRAV2, T-cell receptor alpha variable 2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV2A0A0B4J234 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC19.48■□□□□ 0.71
TRAV2A0A0B4J234 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC19.48■□□□□ 0.71
TRAV2A0A0B4J234 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
TRAV2A0A0B4J234 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRAV2A0A0B4J234 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAV2A0A0B4J234 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAV2A0A0B4J234 AC127502.1-201ENST00000399971 1502 ntBASIC19.47■□□□□ 0.71
TRAV2A0A0B4J234 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRAV2A0A0B4J234 BOD1-206ENST00000480951 814 ntTSL 2 BASIC19.47■□□□□ 0.71
TRAV2A0A0B4J234 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAV2A0A0B4J234 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAV2A0A0B4J234 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
TRAV2A0A0B4J234 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC19.46■□□□□ 0.71
TRAV2A0A0B4J234 CIB2-204ENST00000557846 934 ntTSL 3 BASIC19.46■□□□□ 0.71
TRAV2A0A0B4J234 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAV2A0A0B4J234 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAV2A0A0B4J234 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAV2A0A0B4J234 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAV2A0A0B4J234 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAV2A0A0B4J234 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAV2A0A0B4J234 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
TRAV2A0A0B4J234 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRAV2A0A0B4J234 RPS2P35-201ENST00000443417 897 ntBASIC19.44■□□□□ 0.7
TRAV2A0A0B4J234 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
TRAV2A0A0B4J234 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAV2A0A0B4J234 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
TRAV2A0A0B4J234 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV2A0A0B4J234 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
TRAV2A0A0B4J234 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
TRAV2A0A0B4J234 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV2A0A0B4J234 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV2A0A0B4J234 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAV2A0A0B4J234 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRAV2A0A0B4J234 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAV2A0A0B4J234 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC19.39■□□□□ 0.7
TRAV2A0A0B4J234 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRAV2A0A0B4J234 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC19.39■□□□□ 0.69
TRAV2A0A0B4J234 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRAV2A0A0B4J234 AL139393.2-201ENST00000608721 2025 ntBASIC19.39■□□□□ 0.69
TRAV2A0A0B4J234 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRAV2A0A0B4J234 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRAV2A0A0B4J234 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRAV2A0A0B4J234 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRAV2A0A0B4J234 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TRAV2A0A0B4J234 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
TRAV2A0A0B4J234 LINC00273-201ENST00000539813 1452 ntBASIC19.37■□□□□ 0.69
TRAV2A0A0B4J234 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV2A0A0B4J234 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC19.37■□□□□ 0.69
TRAV2A0A0B4J234 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC19.37■□□□□ 0.69
TRAV2A0A0B4J234 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC19.37■□□□□ 0.69
TRAV2A0A0B4J234 ABCB10P3-201ENST00000561950 2166 ntBASIC19.36■□□□□ 0.69
TRAV2A0A0B4J234 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
TRAV2A0A0B4J234 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAV2A0A0B4J234 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAV2A0A0B4J234 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRAV2A0A0B4J234 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRAV2A0A0B4J234 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRAV2A0A0B4J234 DUX4L29-201ENST00000425409 679 ntBASIC19.35■□□□□ 0.69
TRAV2A0A0B4J234 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRAV2A0A0B4J234 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRAV2A0A0B4J234 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRAV2A0A0B4J234 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRAV2A0A0B4J234 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRAV2A0A0B4J234 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRAV2A0A0B4J234 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRAV2A0A0B4J234 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRAV2A0A0B4J234 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TRAV2A0A0B4J234 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC19.33■□□□□ 0.68
TRAV2A0A0B4J234 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC19.33■□□□□ 0.68
TRAV2A0A0B4J234 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC19.33■□□□□ 0.68
TRAV2A0A0B4J234 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
TRAV2A0A0B4J234 CALM3-209ENST00000597743 577 ntTSL 4 BASIC19.32■□□□□ 0.68
TRAV2A0A0B4J234 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRAV2A0A0B4J234 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC19.32■□□□□ 0.68
TRAV2A0A0B4J234 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
TRAV2A0A0B4J234 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRAV2A0A0B4J234 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRAV2A0A0B4J234 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRAV2A0A0B4J234 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRAV2A0A0B4J234 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRAV2A0A0B4J234 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRAV2A0A0B4J234 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRAV2A0A0B4J234 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRAV2A0A0B4J234 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC19.3■□□□□ 0.68
TRAV2A0A0B4J234 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRAV2A0A0B4J234 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRAV2A0A0B4J234 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRAV2A0A0B4J234 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRAV2A0A0B4J234 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
TRAV2A0A0B4J234 MLEC-202ENST00000412616 841 ntTSL 3 BASIC19.29■□□□□ 0.68
TRAV2A0A0B4J234 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TRAV2A0A0B4J234 AC021231.2-201ENST00000594613 730 ntBASIC19.29■□□□□ 0.68
TRAV2A0A0B4J234 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TRAV2A0A0B4J234 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
TRAV2A0A0B4J234 AC135983.2-203ENST00000454486 1613 ntBASIC19.29■□□□□ 0.68
TRAV2A0A0B4J234 MEST-211ENST00000437945 1455 ntTSL 5 BASIC19.28■□□□□ 0.68
TRAV2A0A0B4J234 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRAV2A0A0B4J234 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC19.28■□□□□ 0.68
TRAV2A0A0B4J234 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRAV2A0A0B4J234 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms