Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 MSH5-218ENST00000494646 528 ntTSL 48.26□□□□□ -1.091e-6■□□□□ 10.9
PRPF8Q6P2Q9 PAN2-211ENST00000549073 587 ntTSL 47.58□□□□□ -1.21e-6■□□□□ 10.9
PRPF8Q6P2Q9 SMYD3-212ENST00000483072 466 ntTSL 27.44□□□□□ -1.221e-6■□□□□ 10.9
PRPF8Q6P2Q9 GPBP1-203ENST00000424459 4683 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.221e-6■□□□□ 10.9
PRPF8Q6P2Q9 SMYD3-202ENST00000366517 1372 ntTSL 1 (best)6.79□□□□□ -1.321e-6■□□□□ 10.9
PRPF8Q6P2Q9 NUSAP1-206ENST00000558582 546 ntTSL 56.74□□□□□ -1.331e-6■□□□□ 10.9
PRPF8Q6P2Q9 SMYD3-218ENST00000630181 1458 ntTSL 2 BASIC6.72□□□□□ -1.331e-6■□□□□ 10.9
PRPF8Q6P2Q9 NUSAP1-207ENST00000559046 580 ntTSL 56.65□□□□□ -1.341e-6■□□□□ 10.9
PRPF8Q6P2Q9 ANLN-204ENST00000424865 596 ntTSL 36.61□□□□□ -1.351e-6■□□□□ 10.9
PRPF8Q6P2Q9 NUSAP1-209ENST00000559659 529 ntTSL 26.6□□□□□ -1.351e-6■□□□□ 10.9
PRPF8Q6P2Q9 SMYD3-201ENST00000366516 1863 ntTSL 1 (best)6.33□□□□□ -1.41e-6■□□□□ 10.9
PRPF8Q6P2Q9 GPBP1-208ENST00000514387 3310 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.51e-6■□□□□ 10.9
PRPF8Q6P2Q9 SMYD3-209ENST00000470510 1042 ntTSL 55.57□□□□□ -1.521e-6■□□□□ 10.9
PRPF8Q6P2Q9 TFDP2-220ENST00000494656 496 ntTSL 53.53□□□□□ -1.841e-6■□□□□ 10.9
PRPF8Q6P2Q9 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.32□□□□□ -1.881e-6■□□□□ 10.9
PRPF8Q6P2Q9 SMYD3-211ENST00000482592 514 ntTSL 33.23□□□□□ -1.891e-6■□□□□ 10.9
PRPF8Q6P2Q9 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.911e-6■□□□□ 10.9
PRPF8Q6P2Q9 SMYD3-215ENST00000490322 368 ntTSL 32.24□□□□□ -2.051e-6■□□□□ 10.9
PRPF8Q6P2Q9 GPBP1-207ENST00000513732 463 ntTSL 32.17□□□□□ -2.061e-6■□□□□ 10.9
PRPF8Q6P2Q9 TFDP2-214ENST00000488107 416 ntTSL 52.03□□□□□ -2.081e-6■□□□□ 10.9
PRPF8Q6P2Q9 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC1.39□□□□□ -2.191e-6■□□□□ 10.9
PRPF8Q6P2Q9 TFDP2-217ENST00000492919 546 ntTSL 21.31□□□□□ -2.21e-6■□□□□ 10.9
PRPF8Q6P2Q9 BUD31-207ENST00000471813 341 ntTSL 21.21□□□□□ -2.221e-6■□□□□ 10.9
PRPF8Q6P2Q9 MGAT4B-220ENST00000522451 583 ntTSL 216.02■□□□□ 0.152e-6■□□□□ 10.9
PRPF8Q6P2Q9 LPIN1-205ENST00000404113 4005 ntTSL 1 (best)7.57□□□□□ -1.22e-7■□□□□ 10.9
PRPF8Q6P2Q9 DENND5A-213ENST00000531580 564 ntTSL 49.24□□□□□ -0.932e-6■□□□□ 10.9
PRPF8Q6P2Q9 LRRFIP1-205ENST00000420665 570 ntTSL 320.19■□□□□ 0.825e-9■□□□□ 10.9
PRPF8Q6P2Q9 DHX38-205ENST00000564307 785 ntTSL 414.28□□□□□ -0.123e-7■□□□□ 10.9
PRPF8Q6P2Q9 HPN-209ENST00000600675 551 ntTSL 419.56■□□□□ 0.724e-31■□□□□ 10.9
PRPF8Q6P2Q9 HPN-205ENST00000596662 584 ntTSL 413.81□□□□□ -0.24e-31■□□□□ 10.9
PRPF8Q6P2Q9 HNRNPD-208ENST00000509263 782 ntTSL 57.17□□□□□ -1.262e-8■□□□□ 10.9
PRPF8Q6P2Q9 DPH1-214ENST00000575998 535 ntTSL 38.03□□□□□ -1.122e-8■□□□□ 10.9
PRPF8Q6P2Q9 PTK7-218ENST00000493339 2987 ntTSL 29.68□□□□□ -0.863e-6■□□□□ 10.9
PRPF8Q6P2Q9 CCDC12-211ENST00000604367 2412 nt11.81□□□□□ -0.521e-9■□□□□ 10.9
PRPF8Q6P2Q9 TRIO-220ENST00000512979 292 ntTSL 58.1□□□□□ -1.112e-7■□□□□ 10.9
PRPF8Q6P2Q9 TRIO-209ENST00000507714 551 ntTSL 37.48□□□□□ -1.212e-7■□□□□ 10.9
PRPF8Q6P2Q9 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC12.75□□□□□ -0.372e-10■□□□□ 10.9
PRPF8Q6P2Q9 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.372e-10■□□□□ 10.9
PRPF8Q6P2Q9 SERPINF2-205ENST00000453723 838 ntTSL 312.4□□□□□ -0.422e-10■□□□□ 10.9
PRPF8Q6P2Q9 MYO18A-208ENST00000530557 1118 ntTSL 516.59■□□□□ 0.251e-6■□□□□ 10.9
PRPF8Q6P2Q9 TBCD-218ENST00000575132 707 ntTSL 512.6□□□□□ -0.397e-8■□□□□ 10.9
PRPF8Q6P2Q9 UBAC1-203ENST00000471163 838 ntTSL 313.89□□□□□ -0.191e-7■□□□□ 10.9
PRPF8Q6P2Q9 KDM4B-204ENST00000588166 477 ntTSL 512.85□□□□□ -0.355e-6■□□□□ 10.9
PRPF8Q6P2Q9 KIAA1522-205ENST00000468130 684 ntTSL 223.44■■□□□ 1.344e-6■□□□□ 10.9
PRPF8Q6P2Q9 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC18.6■□□□□ 0.576e-10■□□□□ 10.9
PRPF8Q6P2Q9 MFF-210ENST00000423098 581 ntTSL 318.23■□□□□ 0.516e-10■□□□□ 10.9
PRPF8Q6P2Q9 METTL21A-212ENST00000471128 546 ntTSL 417.81■□□□□ 0.446e-10■□□□□ 10.9
PRPF8Q6P2Q9 SLC22A18-209ENST00000485423 635 ntTSL 217.81■□□□□ 0.446e-10■□□□□ 10.9
PRPF8Q6P2Q9 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.34e-6■□□□□ 10.9
PRPF8Q6P2Q9 MFF-221ENST00000489696 639 ntTSL 316.85■□□□□ 0.296e-10■□□□□ 10.9
PRPF8Q6P2Q9 METTL21A-211ENST00000461419 559 ntTSL 516.75■□□□□ 0.276e-10■□□□□ 10.9
PRPF8Q6P2Q9 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC16.7■□□□□ 0.266e-10■□□□□ 10.9
PRPF8Q6P2Q9 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.266e-10■□□□□ 10.9
PRPF8Q6P2Q9 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC16.54■□□□□ 0.246e-10■□□□□ 10.9
PRPF8Q6P2Q9 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC16.27■□□□□ 0.26e-10■□□□□ 10.9
PRPF8Q6P2Q9 LMNB1-204ENST00000463908 557 ntTSL 415.67■□□□□ 0.16e-10■□□□□ 10.9
PRPF8Q6P2Q9 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC15.64■□□□□ 0.096e-10■□□□□ 10.9
PRPF8Q6P2Q9 MFF-211ENST00000436237 527 ntTSL 415.55■□□□□ 0.086e-10■□□□□ 10.9
PRPF8Q6P2Q9 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC15.39■□□□□ 0.056e-10■□□□□ 10.9
PRPF8Q6P2Q9 MFF-224ENST00000525195 558 ntTSL 415.28■□□□□ 0.046e-10■□□□□ 10.9
PRPF8Q6P2Q9 LMNB1-206ENST00000492190 738 ntTSL 315.16■□□□□ 0.026e-10■□□□□ 10.9
PRPF8Q6P2Q9 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -06e-10■□□□□ 10.9
PRPF8Q6P2Q9 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.016e-10■□□□□ 10.9
PRPF8Q6P2Q9 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.046e-10■□□□□ 10.9
PRPF8Q6P2Q9 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.076e-10■□□□□ 10.9
PRPF8Q6P2Q9 MFF-209ENST00000418961 720 ntTSL 514.1□□□□□ -0.156e-10■□□□□ 10.9
PRPF8Q6P2Q9 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC13.99□□□□□ -0.174e-6■□□□□ 10.9
PRPF8Q6P2Q9 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.174e-6■□□□□ 10.9
PRPF8Q6P2Q9 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.174e-6■□□□□ 10.9
PRPF8Q6P2Q9 MFF-213ENST00000443428 566 ntTSL 213.65□□□□□ -0.226e-10■□□□□ 10.9
PRPF8Q6P2Q9 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC13.04□□□□□ -0.326e-10■□□□□ 10.9
PRPF8Q6P2Q9 ZMIZ2-209ENST00000463931 861 ntTSL 412.46□□□□□ -0.416e-10■□□□□ 10.9
PRPF8Q6P2Q9 AK2-213ENST00000551979 581 ntTSL 211.22□□□□□ -0.616e-10■□□□□ 10.9
PRPF8Q6P2Q9 TGFBR3-203ENST00000417833 551 ntTSL 411.07□□□□□ -0.646e-10■□□□□ 10.9
PRPF8Q6P2Q9 CPNE3-205ENST00000522240 446 ntTSL 310.62□□□□□ -0.716e-10■□□□□ 10.9
PRPF8Q6P2Q9 KIAA1958-202ENST00000374244 2643 ntAPPRIS ALT1 TSL 5 BASIC10.29□□□□□ -0.768e-19■□□□□ 10.9
PRPF8Q6P2Q9 CPNE3-210ENST00000621245 581 ntTSL 510.01□□□□□ -0.816e-10■□□□□ 10.9
PRPF8Q6P2Q9 AK2-211ENST00000548559 530 ntTSL 48.71□□□□□ -1.016e-10■□□□□ 10.9
PRPF8Q6P2Q9 AK2-214ENST00000626911 160 ntTSL 3 BASIC8.38□□□□□ -1.076e-10■□□□□ 10.9
PRPF8Q6P2Q9 KIAA1958-201ENST00000337530 11775 ntAPPRIS P2 TSL 1 (best) BASIC7.21□□□□□ -1.268e-19■□□□□ 10.9
PRPF8Q6P2Q9 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC6.65□□□□□ -1.348e-19■□□□□ 10.9
PRPF8Q6P2Q9 CPNE3-209ENST00000620393 680 ntTSL 56.44□□□□□ -1.386e-10■□□□□ 10.9
PRPF8Q6P2Q9 LMNB1-205ENST00000472034 730 ntTSL 34.27□□□□□ -1.736e-10■□□□□ 10.9
PRPF8Q6P2Q9 CPNE3-206ENST00000523469 656 ntTSL 53.88□□□□□ -1.796e-10■□□□□ 10.9
PRPF8Q6P2Q9 GLYR1-203ENST00000586095 319 ntTSL 23.25□□□□□ -1.896e-10■□□□□ 10.9
PRPF8Q6P2Q9 CPNE3-211ENST00000621526 279 ntTSL 32.3□□□□□ -2.046e-10■□□□□ 10.9
PRPF8Q6P2Q9 CPNE3-213ENST00000622183 156 ntTSL 31.17□□□□□ -2.226e-10■□□□□ 10.9
PRPF8Q6P2Q9 HBG2-202ENST00000380252 694 ntTSL 3 BASIC8.63□□□□□ -1.033e-8■□□□□ 10.9
PRPF8Q6P2Q9 HBG2-203ENST00000380259 1772 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.043e-8■□□□□ 10.9
PRPF8Q6P2Q9 ETV4-206ENST00000585508 760 ntTSL 516.22■□□□□ 0.191e-7■□□□□ 10.9
PRPF8Q6P2Q9 OIP5-AS1-207ENST00000560545 566 ntTSL 29.25□□□□□ -0.935e-7■□□□□ 10.9
PRPF8Q6P2Q9 CCDC22-203ENST00000496651 809 ntTSL 315.27■□□□□ 0.042e-6■□□□□ 10.9
PRPF8Q6P2Q9 CCDC22-202ENST00000490300 741 ntTSL 311.19□□□□□ -0.622e-6■□□□□ 10.9
PRPF8Q6P2Q9 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.642e-6■□□□□ 10.9
PRPF8Q6P2Q9 TARS-207ENST00000505012 608 ntTSL 47.66□□□□□ -1.185e-6■□□□□ 10.9
PRPF8Q6P2Q9 SH3PXD2A-201ENST00000315994 5504 ntTSL 1 (best)9.92□□□□□ -0.827e-11■□□□□ 10.9
PRPF8Q6P2Q9 DGKZ-221ENST00000532941 731 ntTSL 313.93□□□□□ -0.185e-10■□□□□ 10.9
PRPF8Q6P2Q9 ANKMY1-205ENST00000391988 569 ntTSL 517.72■□□□□ 0.438e-10■□□□□ 10.9
PRPF8Q6P2Q9 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.64e-8■□□□□ 10.9
PRPF8Q6P2Q9 ZFAND2B-214ENST00000464902 1851 ntTSL 218.08■□□□□ 0.489e-9■□□□□ 10.9
Retrieved 100 of 73,762 protein–RNA pairs in 693.7 ms